ID: uc010qcu.1_intron_5_0_chr10_22857984_r.3p
GENE: (2)
chr10:22857934-22858183-


(3)
B-CELL
(2)
BRAIN
(5)
BREAST
(8)
CELL-LINE
(3)
CERVIX
(3)
LIVER
(2)
OTHER
(39)
SKIN
(1)
XRN.ip

Sense strand
TCCTGGGGGCACTGAGCACCAGGGGGATGGAAGATCGGCCCTGGGGAGACCCCCCCAGCCTGGTCTTGGCTCCCTTCCCCAATGTGAGGAGTCTCTTCCGTTCAAGTTTCCGCATCTGTGAATTGCAGGAAGCTCAATCCTAGTCAATGCCTGAGCTGCTCGATGAAAGCCAGTAATCAAAAATTTTGATTTCTTTGCAGATGGCCAATCTAAAAGCCACTTTCACTTTTCCCAAGCCAACTGTAAGTTC
.......................................................................................((((....)))).....((((((((((.........))).)))))))....................................................................................................................
....................................................................................85.................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532873(GSM532873)
G699N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................CTGTGAATTGCAGGACA......................................................................................................................1736.000.0013.00-3.00-1.003.001.00---2.00-----2.00--1.001.00---1.002.002.00------1.001.00-1.00-------1.00--------------------
...................................................................................................................CTGTGAATTGCAGGAC.......................................................................................................................1633.000.005.00-3.002.001.001.001.00-1.002.00--1.00-2.002.00----1.001.00-1.001.00--1.00--1.001.001.00-----1.00---1.00-----1.00------1.00---------
...................................................................................................................CTGTGAATTGCAGGACAC.....................................................................................................................1816.000.006.00-1.002.00----1.001.00--1.00-----1.00--1.00------------------------1.00----------1.00-------
....................................................................................................................TGTGAATTGCAGGAAACAT...................................................................................................................1916.000.00-14.00--------1.00-----------------------------------------1.00------------
...................................................................................................................CTGTGAATTGCAGGACACA....................................................................................................................1915.000.006.00---2.00-1.00-----1.00----1.00-----1.00-------------1.00---1.00-------1.00---------------
....................................................................................................................TGTGAATTGCAGGAATTAA...................................................................................................................193.000.00-----------3.00-----------------------------------------------------
....................................................................................................................TGTGAATTGCAGGAAACA....................................................................................................................183.000.00-1.00-------------------------------------------------1.00-1.00-----------
....................................................................................................................TGTGAATTGCAGGAAACAG...................................................................................................................192.000.00-2.00---------------------------------------------------------------
....................................................................................................................TGTGAATTGCAGGAAAAAT...................................................................................................................192.000.00-1.00---------------------------------------------------------1.00-----
.....................................................................................................................GTGAATTGCAGGAAGAAC...................................................................................................................181.000.00---------------------------1.00-------------------------------------
..........ACTGAGCACCAGGGGTGGG.............................................................................................................................................................................................................................191.000.00------------------------------------------------------1.00----------
....................................................................................................................TGTGAATTGCAGGAAGGCTT..................................................................................................................201.000.00--------------1.00--------------------------------------------------
..................................................................................................................TCTGTGAATTGCAGGACAC.....................................................................................................................191.000.00--1.00--------------------------------------------------------------
.................................................................................................................ATCTGTGAATTGCAGGACACA....................................................................................................................211.000.00-------------------1.00---------------------------------------------
....................AGGGGGATGGAAGATCGGC...................................................................................................................................................................................................................1911.001.00--1.00--------------------------------------------------------------
...................................................................................................................CTGTGAATTGCAGGACCA.....................................................................................................................181.000.00----------------------------------------------------------1.00------
....................................................................................................................TGTGAATTGCAGGAAAGGC...................................................................................................................191.000.00-----------------------------------------------1.00-----------------
....................................................................................................................TGTGAATTGCAGGAATTGA...................................................................................................................191.000.00------1.00----------------------------------------------------------
.................................................................................................................ATCTGTGAATTGCAGGACCC.....................................................................................................................201.000.00----------------------------1.00------------------------------------
...........................................................................................................TTCCGCATCTGTGAATTGCA...........................................................................................................................2011.001.00-------------1.00---------------------------------------------------
......................................................................................................................TGAATTGCAGGAAGCAGTG.................................................................................................................191.000.00-1.00---------------------------------------------------------------
.....................................................................................................................GTGAATTGCAGGAAGGTT...................................................................................................................181.000.00------------------1.00----------------------------------------------
......................................................................................................................................................CTGAGCTGCTCGATG.....................................................................................1511.001.00-----------------------------1.00-----------------------------------
...................................................................................................................CTGTGAATTGCAGGACATA....................................................................................................................191.000.00-----------------1.00-----------------------------------------------
..................................................................................................................TCTGTGAATTGCAGGACA......................................................................................................................181.000.00--------1.00--------------------------------------------------------
.........................................................................................AGTCTCTTCCGTTCAAAA...............................................................................................................................................181.000.00--------------------------------------------------1.00--------------
..................................................................................................................TCTGTGAATTGCAGGAC.......................................................................................................................171.000.00-----------------------------------1.00-----------------------------
....................................................................................................................TGTGAATTGCAGGAAAAA....................................................................................................................181.000.00-------------------------------------------1.00---------------------
..................................................................................................................TCTGTGAATTGCAGGACACA....................................................................................................................201.000.00---------------------------------------------1.00-------------------
...................................................................................................................CTGTGAATTGCAGGAA.......................................................................................................................1630.330.33--------0.33--------------------------------------------------------
...............................................................................................................................................................................................................ATCTAAAAGCCACTTT...........................1640.250.25-------------------------------------------------------------0.25---
....................................................................................................................TGTGAATTGCAGGAAGC.....................................................................................................................1740.250.25------------------------------------------------------------0.25----
.....................................................................................................................GTGAATTGCAGGAAGCATT..................................................................................................................1950.200.20-0.20---------------------------------------------------------------
.....................................................................................................................GTGAATTGCAGGAAGC.....................................................................................................................1650.200.20--------------------------------------------------------------0.20--
.............................................................................................................................CAGGAAGCTCAATCC..............................................................................................................1570.140.14----------------------------------------------------------------0.14

Antisense strand
TCCTGGGGGCACTGAGCACCAGGGGGATGGAAGATCGGCCCTGGGGAGACCCCCCCAGCCTGGTCTTGGCTCCCTTCCCCAATGTGAGGAGTCTCTTCCGTTCAAGTTTCCGCATCTGTGAATTGCAGGAAGCTCAATCCTAGTCAATGCCTGAGCTGCTCGATGAAAGCCAGTAATCAAAAATTTTGATTTCTTTGCAGATGGCCAATCTAAAAGCCACTTTCACTTTTCCCAAGCCAACTGTAAGTTC
.......................................................................................((((....)))).....((((((((((.........))).)))))))....................................................................................................................
....................................................................................85.................................................136................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191555(GSM715665)
195genomic small RNA (size selected RNA from . (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532873(GSM532873)
G699N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................................................................................................................ATCTAAAAGCCACTTTATC........................ 1941.000.00-------1.00---------------------------------------------------------
..................................................................................................................................................................................................................TAAAAGCCACTTTCACTTTA.................... 201.000.00-------------1.00---------------------------------------------------
...............................................................................................................................................................................................................ATCTAAAAGCCACTTTATTT....................... 2041.000.00-------1.00---------------------------------------------------------
..................................................................................................CGTTCAAGTTTCCGCCC....................................................................................................................................... 171.000.00---------------------------------------1.00-------------------------
..................................................................................................................................................................................................................TAAAAGCCACTTTCACTTTTA................... 211.000.00-------------1.00---------------------------------------------------
.....................................................................CTCCCTTCCCCAATGTAGGA................................................................................................................................................................. 201.000.00--------------------------------------------------------1.00--------
............................................................................................CTCTTCCGTTCAAGTGTC............................................................................................................................................ 181.000.00----------------------1.00------------------------------------------
...........................................................................................................................................................................AGTAATCAAAAATTTTTTTG........................................................... 201.000.00----------------------------------------1.00------------------------
...............................................................................................................................................................................................................ATCTAAAAGCCACTTTCATTT...................... 211.000.00-------1.00---------------------------------------------------------
...............................................................................................................................................................................................................ATCTAAAAGCCACTTTATA........................ 1941.000.00-------1.00---------------------------------------------------------
............................................................................................................................................................................................................AGTGGCTTTTAGATTGG............................. 1720.500.50----------------------------0.50------------------------------------
.................................................ACCAGGCTGGGGGGG.......................................................................................................................................................................................... 1560.170.17---------------------------------------------------------------0.17-