ID: uc010pya.1_intron_3_0_chr1_237897057_f.3p
GENE: (4)
chr1:237905396-237905645+


(1)
B-CELL 		(8)
CELL-LINE 		(5)
HEART 		(1)
LIVER 		(3)
OTHER 		(1)
SKIN 		(1)
TESTES

Sense strand
TTTTGTAAAAGCACTATATATAATTTTCATGTCATGAATTCATTGATTATGTCATCTAAGCATTCTATCTTACATGTGTTTAAACAAGGTTGATGATAAATTAATACAAATGATTTGCTCTTCTATGTCTAATGTTCTTTTGCACTTTCTAAAATCTCAACATATTCCTGTCTCCTTTTTTTTTTTTTTTAAATATACAGAGTTGTCATGATGAGGAAGATGACGATGGTGAAGAGGAAGTGAAGAGTTT
..........................................................................((((((((((.((((..((.(((((((((.......))))))).)).)).........(((......)))......................................)))).)))))))))).....................................................
...............................................................64......................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189782SRR189785SRR553576(SRX182782)
source: Testis. (testes)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAAATG......................................................2458.000.0023.0030.001.004.00----------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAAAGG......................................................2439.000.0021.0017.00--1.00---------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATCTAC....................................................265.000.002.003.00------------------
.............................................................................................................................................................................CCTTTTTTTTTTTTTTTAAATAATAG...................................................264.000.001.002.00--1.00---------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAAAGGG.....................................................253.000.00-2.001.00-----------------
...............................................................................................................................................................................................................ATGATGAGGAAGATGACG.........................1813.003.00-------2.00-1.00----------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATACTG....................................................262.000.00-2.00------------------
..............................................................................................................................................................................CTTTTTTTTTTTTTTTAAATATAAAT..................................................262.000.00----2.00---------------
..............................................................................................................................................................................CTTTTTTTTTTTTTTTAAATACCAG...................................................252.000.001.00---1.00---------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATCCAT....................................................262.000.002.00-------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATTTCT....................................................262.000.001.001.00------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAAAAG......................................................242.000.001.001.00------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATTACT....................................................262.000.001.001.00------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAAAGT......................................................242.000.001.001.00------------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTACCC.........................................................231.000.00--1.00-----------------
..............................................................................................................................................................................CTTTTTTTTTTTTTTTAAATATATAG..................................................261.000.00----1.00---------------
...............................................................................................................................................................................................................ATGATGAGGAAGATGACGATGGTGAAGA...............2811.001.00----------------1.00---
...................................................................................................................................................................................................TACAGAGTTGTCATGTTG.....................................181.000.00------------1.00-------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAACTC.......................................................251.000.00--1.00-----------------
...............................................................................................................................................................................................................................CGATGGTGAAGAGGAAGTGAAGAG...2411.001.00-----------1.00--------
.............................................................................................................................................................................CCTTTTTTTTTTTTTTTAAATTAAT....................................................251.000.001.00-------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATCAAG....................................................261.000.001.00-------------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTACCC........................................................241.000.00--1.00-----------------
........................................................................................................................................................................TGTCTCCTTTTTTTTTTTTTTTTAAC........................................................261.000.00--1.00-----------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTGCTC........................................................241.000.00-----1.00--------------
........................................................................................................................................................................TGTCTCCTTTTTTTTTTTTTTTGAG.........................................................251.000.00-----1.00--------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATATACTA..................................................281.000.001.00-------------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAAAAG.......................................................251.000.00-1.00------------------
.............................................................................................................................................................................CCTTTTTTTTTTTTTTTAAATTCTT....................................................251.000.001.00-------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATATATT...................................................271.000.001.00-------------------
........................................................................................................................................................................TGTCTCCTTTTTTTTTTTTTCCC...........................................................231.000.00--1.00-----------------
.............................................................................................................................................................................CCTTTTTTTTTTTTTTTAAATTTGG....................................................251.000.001.00-------------------
........................................................................................................................................................................TGTCTCCTTTTTTTTTTTTTTCGGC.........................................................251.000.00-----1.00--------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAAAA........................................................241.000.00---1.00----------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTATTTT.......................................................251.000.00-1.00------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATCTCC....................................................261.000.00-1.00------------------
....................................................................CTTACATGTGTTTAAGCGA...................................................................................................................................................................191.000.00-------------1.00------
.............................................................................................................................................................................CCTTTTTTTTTTTTTTTAAATAACAG...................................................261.000.001.00-------------------
.....................................................................................................................................................................................TTTTTTTTTAAATATACACGAG...............................................221.000.00--------1.00-----------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAAAATA.....................................................251.000.001.00-------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATACCC....................................................261.000.001.00-------------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAAAATC......................................................261.000.00------1.00-------------
.............................................................................................................................................................................CCTTTTTTTTTTTTTTTAAATACAAG...................................................261.000.001.00-------------------
...........................................................................................................................................................................CTCCTTTTTTTTTTTTTTTAAAATG......................................................251.000.00-1.00------------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAAAATG......................................................261.000.00---1.00----------------
..............................................................................................................................................................................CTTTTTTTTTTTTTTTAAATATACAGG.................................................271.000.00---1.00----------------
...........................................................................................................................................................................CTCCTTTTTTTTTTTTTTTACTTG.......................................................241.000.00----1.00---------------
........................................................................................................................................................................TGTCTCCTTTTTTTTTTTTTTTGGG.........................................................251.000.00--1.00-----------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAGG.........................................................231.000.00-----1.00--------------
.............................................................................................................................................................................CCTTTTTTTTTTTTTTTAAATATAC....................................................2511.001.00-1.00------------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAAAAATG.....................................................271.000.001.00-------------------
.............................................................................................................................................................................CCTTTTTTTTTTTTTTTAAATTTAG....................................................251.000.001.00-------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAAAAT......................................................241.000.001.00-------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATAATTT...................................................271.000.00-1.00------------------
......................................................................................................................................................................................................................................GAAGAGGAAGTGAAGTAAA.191.000.00-----------------1.00--
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAAAATG.....................................................251.000.001.00-------------------
........................................................................................................................................................................TGTCTCCTTTTTTTTTTTTTTTAAGC........................................................261.000.00--1.00-----------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTGGGG........................................................241.000.00--1.00-----------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTACG.........................................................231.000.00--1.00-----------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAAAATTC.....................................................271.000.001.00-------------------
.....................................................................................................................................................................TCCTGTCTCCTTTTTATTG..................................................................191.000.00------1.00-------------
.....................................................................................................................................................................TCCTGTCTCCTTTTTTTA...................................................................181.000.00------1.00-------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATTTTA....................................................261.000.00-1.00------------------
..................................................................................................................................................................................TTTTTTTTTTTTAAATATACCAG.................................................231.000.00-1.00------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATATTCTG..................................................2830.330.33-0.33------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATATCTTG..................................................2830.330.330.33-------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATAT......................................................2430.330.33-0.33------------------
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATATG.....................................................2530.330.33-0.33------------------
...............................................................................................................................................................................................................ATGATGAGGAAGATGAC..........................1760.170.17------------------0.17-
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAAAT........................................................2470.140.14------0.14-------------
..........................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTAAATTG......................................................2670.140.140.14-------------------
....................................................................................................................................................................................................................GAGGAAGATGACGAT.......................1580.120.12---------0.12----------
..............................................................................................................................................................................................................CATGATGAGGAAGATG............................1680.120.12-------------------0.12

Antisense strand
TTTTGTAAAAGCACTATATATAATTTTCATGTCATGAATTCATTGATTATGTCATCTAAGCATTCTATCTTACATGTGTTTAAACAAGGTTGATGATAAATTAATACAAATGATTTGCTCTTCTATGTCTAATGTTCTTTTGCACTTTCTAAAATCTCAACATATTCCTGTCTCCTTTTTTTTTTTTTTTAAATATACAGAGTTGTCATGATGAGGAAGATGACGATGGTGAAGAGGAAGTGAAGAGTTT
..........................................................................((((((((((.((((..((.(((((((((.......))))))).)).)).........(((......)))......................................)))).)))))))))).....................................................
...............................................................64......................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR189782SRR189785SRR553576(SRX182782)
source: Testis. (testes)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
.............................................................................................................ATGATTTGCTCTTCTAG............................................................................................................................ 171.000.00--------1.00-----------
..........................................................................................................................................TTTGCACTTTCTAAAAGGCG............................................................................................ 201.000.00--------------1.00-----
.................................................................................................................................................................................................TATACAGAGTTGTCATGGGG..................................... 201.000.00---------------1.00----
............................................................................................................................................................................TCCTTTTTTTTTTTTTTTAAATTGG..................................................... 251.000.00----------1.00---------