ID: uc010pxz.1_intron_9_0_chr1_237875138_f.5p
GENE: RYR2(10)
chr1:237875088-237875337+


(1)
B-CELL 		(1)
BRAIN 		(17)
BREAST 		(9)
CELL-LINE 		(9)
HEART 		(1)
KIDNEY 		(9)
LIVER 		(1)
OTHER 		(10)
SKIN 		(3)
UTERUS 		(1)
XRN.ip

Sense strand
TCAACAATATGTCTTTCCTTATTACTGATACCAAGTCAAAGATGTCAAAGGTATTACTATAAACTGTTTCACTGTTCTGGAAAATATCTGAATGTGACTTTCATGAATTGACTTTTTTTTTTTAGATTTTCGAAGATTTGTAACTGGAATCTGACAGATTTGGTAATGTTATAAATTGGTTCAAATATGCAAGCTGTTTTAAGGTTACTGGAATTTGTTTGAATCAGGCATGGTAAGACATGCAGACGGG
..............................................................................................................(((....(((.((((((((....((........)).)))))))).)))...)))......................................................................................
.....................................................................................................102...............................................................168................................................................................
SizePerfect hitTotal NormPerfect NormSRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		TAX577740(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR191496(GSM715606)
162genomic small RNA (size selected RNA from . (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
.............................................................................................................................................AACTGGAATCTGACAGATTTGGT......................................................................................23142.0042.00-1.004.001.001.004.00-1.00---3.003.001.002.00--1.002.00--1.002.00-2.002.00--------1.001.00---1.00-1.001.00-1.001.001.00-----1.00---1.00--1.00---
..............................................................................................................................................ACTGGAATCTGACAGATTTGGT......................................................................................22135.0035.00-1.007.00---5.00-2.00------2.00---2.00---2.00------1.001.001.001.00--1.001.00-----------1.00-1.00-1.001.00---1.00-1.001.001.00
..............................................................................................................................................ACTGGAATCTGACAGATTTG........................................................................................2014.004.00-----1.00-2.00------------------1.00------------------------------------
.........................TGATACCAAGTCAAAGATGTCAAAGGC......................................................................................................................................................................................................274.000.002.00--2.00-----------------------------------------------------------
.............................................................................................................................................AACTGGAATCTGACAGATTTG........................................................................................2114.004.00-------------1.00--2.00------------1.00---------------------------------
..................TTATTACTGATACCAAGTCAAAGATGTC............................................................................................................................................................................................................2813.003.00-1.00-1.00----------------1.00------------------------------------------
.............................................................................................................................................AACTGGAATCTGACAGATTTGGA......................................................................................2312.002.00--------1.00----------------------------------------------1.00-------
.............................................................................................................................................AACTGGAATCTGACAGATTTGG.......................................................................................2212.002.00-------------1.00------------------------------------1.00------------
....................ATTACTGATACCAAGTCAAAGATG..............................................................................................................................................................................................................2412.002.00----2.00----------------------------------------------------------
..........................GATACCAAGTCAAAGATGTCAAAGGCA.....................................................................................................................................................................................................272.000.00---1.00-----1.00-----------------------------------------------------
........................CTGATACCAAGTCAAAGATGTCA...........................................................................................................................................................................................................2312.002.00-1.00-1.00-----------------------------------------------------------
......................TACTGATACCAAGTCAAAGATGTCAAAGGC......................................................................................................................................................................................................302.000.00-1.00--1.00----------------------------------------------------------
.........................TGATACCAAGTCAAAGATGTC............................................................................................................................................................................................................2112.002.002.00--------------------------------------------------------------
......................TACTGATACCAAGTCAAAGATGT.............................................................................................................................................................................................................2312.002.00---1.00-----1.00-----------------------------------------------------
..........................GATACCAAGTCAAAGATGTC............................................................................................................................................................................................................2012.002.00-1.00-1.00-----------------------------------------------------------
........................CTGATACCAAGTCAAAGATGTC............................................................................................................................................................................................................2212.002.001.001.00-------------------------------------------------------------
..............................................................................................................................................ACTGGAATCTGACAGATTTGG.......................................................................................2112.002.00----------------------------1.00------------------1.00---------------
.......................ACTGATACCAAGTCAAAGATGTC............................................................................................................................................................................................................2312.002.002.00--------------------------------------------------------------
......................TACTGATACCAAGTCAAAGATGTCA...........................................................................................................................................................................................................2512.002.001.00---1.00----------------------------------------------------------
.......................ACTGATACCAAGTCAAAGATATC............................................................................................................................................................................................................2311.001.00---1.00-----------------------------------------------------------
..........................................................................................................ATTGACTTTTTTTTTTTCTGG...........................................................................................................................211.000.00----------1.00----------------------------------------------------
.............................................................................................................................................AACTGGAATCTGACAGATTTCGCT.....................................................................................2411.001.00--------------1.00------------------------------------------------
.................................AGTCAAAGATGTCAAAGGCAG....................................................................................................................................................................................................211.000.00---1.00-----------------------------------------------------------
.............TTTCCTTATTACTGATACCA.........................................................................................................................................................................................................................2011.001.001.00--------------------------------------------------------------
..........................GATACCAAGTCAAAGATGTCAAAGGC......................................................................................................................................................................................................261.000.00-1.00-------------------------------------------------------------
.............................................................................................................................................AACTGGAATCTGACAGATTTGGTA.....................................................................................2411.001.00--------1.00------------------------------------------------------
...................TATTACTGATACCAAGTCAAAGATG..............................................................................................................................................................................................................2511.001.001.00--------------------------------------------------------------
..........................................................................................................ATTGACTTTTTTTTTTTCGGG...........................................................................................................................211.000.00----------1.00----------------------------------------------------
................................AAGTCAAAGATGTCAAAGGCAG....................................................................................................................................................................................................221.000.001.00--------------------------------------------------------------
..........................GATACCAAGTCAAAGATGTCAAAGGCAG....................................................................................................................................................................................................281.000.00---------1.00-----------------------------------------------------
......ATATGTCTTTCCTTATTACTGATACCAAGTC.....................................................................................................................................................................................................................3111.001.001.00--------------------------------------------------------------
......ATATGTCTTTCCTTATTACTGATACC..........................................................................................................................................................................................................................2611.001.00----1.00----------------------------------------------------------
......................TACTGATACCAAGTCAAAGATGTCAAAG........................................................................................................................................................................................................2811.001.00-1.00-------------------------------------------------------------
.............................................................................................................................................AACTGGAATCTGACAGATTTGGG......................................................................................2311.002.00--1.00------------------------------------------------------------
..AACAATATGTCTTTCCTTATT...................................................................................................................................................................................................................................2111.001.001.00--------------------------------------------------------------
...........................ATACCAAGTCAAAGATGTCA...........................................................................................................................................................................................................2011.001.001.00--------------------------------------------------------------
.............................................................................................................................................AACTGGAATCTGACAGATTTGGTT.....................................................................................2411.0042.00------------------------------------------------1.00--------------
...............................................................................GAAAATATCTGAATGTGACTTTCATG.................................................................................................................................................2611.001.001.00--------------------------------------------------------------
.............................................................................................................................................AACTGGAATCTGACAGATTT.........................................................................................2011.001.00---------------------------------------------------------1.00-----
....................ATTACTGATACCAAGTCAAAGATGTCAAAGGC......................................................................................................................................................................................................321.000.00-1.00-------------------------------------------------------------
.......................ACTGATACCAAGTCAAAGATGTCA...........................................................................................................................................................................................................2411.001.00---------1.00-----------------------------------------------------
..........................................................................................................ATTGACTTTTTTTTTTGAT.............................................................................................................................191.000.00-------------------------------------------1.00-------------------
.............................................................................................................................................AACTGGAATCTGACAGATTTGGTG.....................................................................................2411.0042.00---------------------1.00-----------------------------------------
........................CTGATACCAAGTCAAAGATGTCAAAGGC......................................................................................................................................................................................................281.000.001.00--------------------------------------------------------------
...........................................................................................................................................................................................TGCAAGCTGTTTTAAACTA............................................191.000.00----------------------------------------1.00----------------------
......................TACTGATACCAAGTCAAAGATG..............................................................................................................................................................................................................2211.001.00---------------1.00-----------------------------------------------
....................ATTACTGATACCAAGTCAAAGATGTC............................................................................................................................................................................................................2611.001.00-1.00-------------------------------------------------------------
.............................ACCAAGTCAAAGATGTC............................................................................................................................................................................................................1711.001.00---1.00-----------------------------------------------------------
.......................................................................................................TGAATTGACTTTTTTTTTGAG..............................................................................................................................211.000.00----------1.00----------------------------------------------------
.....................TTACTGATACCAAGTCAAAGATGTCAAAGGC......................................................................................................................................................................................................311.000.00-1.00-------------------------------------------------------------
.................................AGTCAAAGATGTCAAAGGCAGC...................................................................................................................................................................................................221.000.00--------------------1.00------------------------------------------
.......................ACTGATACCAAGTCAAAGAT...............................................................................................................................................................................................................2011.001.001.00--------------------------------------------------------------
...............................................................................................................................................CTGGAATCTGACAGATTTGGT......................................................................................2111.001.00-------1.00-------------------------------------------------------
...............................................................................................................................TTTCGAAGATTTGTAAA..........................................................................................................171.000.00-----------------1.00---------------------------------------------
...........TCTTTCCTTATTACTGATACCAAGTCAAA..................................................................................................................................................................................................................2911.001.00-1.00-------------------------------------------------------------
..........................................................................................................ATTGACTTTTTTTTTTTAG.............................................................................................................................1950.200.20----------0.20----------------------------------------------------
.....AATATGTCTTTCCTTAT....................................................................................................................................................................................................................................1780.120.12---0.12-----------------------------------------------------------
.......................ACTGATACCAAGTCA....................................................................................................................................................................................................................1590.110.11---0.11-----------------------------------------------------------

Antisense strand
TCAACAATATGTCTTTCCTTATTACTGATACCAAGTCAAAGATGTCAAAGGTATTACTATAAACTGTTTCACTGTTCTGGAAAATATCTGAATGTGACTTTCATGAATTGACTTTTTTTTTTTAGATTTTCGAAGATTTGTAACTGGAATCTGACAGATTTGGTAATGTTATAAATTGGTTCAAATATGCAAGCTGTTTTAAGGTTACTGGAATTTGTTTGAATCAGGCATGGTAAGACATGCAGACGGG
..............................................................................................................(((....(((.((((((((....((........)).)))))))).)))...)))......................................................................................
.....................................................................................................102...............................................................168................................................................................
SizePerfect hitTotal NormPerfect NormSRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		TAX577740(Rovira)
total RNA. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR191599(GSM715709)
89genomic small RNA (size selected RNA from t. (breast)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		TAX577579(Rovira)
total RNA. (breast)		SRR191496(GSM715606)
162genomic small RNA (size selected RNA from . (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
................................................................................................................TTTTTTTTTTTAGATTTTTAAA.................................................................................................................... 221.000.00--------------------------------------1.00------------------------
...........................................................................................................................................................................................TGCAAGCTGTTTTAAATAA............................................ 191.000.00---------------------------1.00-----------------------------------
.....................................AAAGATGTCAAAGGTATCTG................................................................................................................................................................................................. 201.000.00-----1.00---------------------------------------------------------