ID: uc010pvj.1_intron_4_0_chr1_226109345_r.5p
GENE: (3)
chr1:226109704-226109953-


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(1)
AGO3.ip
(17)
B-CELL
(6)
BRAIN
(21)
BREAST
(49)
CELL-LINE
(5)
CERVIX
(3)
FIBROBLAST
(5)
HEART
(2)
HELA
(1)
KIDNEY
(4)
LIVER
(4)
OTHER
(28)
SKIN
(1)
UTERUS
(1)
XRN.ip

Sense strand
ACATCGTGGTCTCCTGTGCGGCTGGTGTCACCATCAGCTCTGTGGAGAAGGTGCCCATCTCAGCCCTGATGCCCCTTGTGTGAGGGGAGGGTTGACCCACGAATGGCAGCTAATGGGTGGGTGCTGGTGGGAGCCGTGCCCTGGCCACTCATTCGGCTCTCTCCCTCACCCTAGAAGCTGATGGCATTCCAGCCAGCCCCCAAAGTGATTCGCTGCATGACCAACACACCTGTGGTAGTGCAGGAAGGCG
..................................................................................................................(((((((....((.((((((((.((....))........)))))))).)))))))))...............................................................................
...............................................................................................................112...............................................................178......................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189787DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR037936(GSM510474)
293cand1. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189783SRR189785SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM339994(GSM339994)
hues6. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR191462(GSM715572)
1genomic small RNA (size selected RNA from to. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR343336SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335TAX577579(Rovira)
total RNA. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
GSM339996(GSM339996)
hues6Neuron. (cell line)
SRR191530(GSM715640)
132genomic small RNA (size selected RNA from . (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029131(GSM416760)
MCF7. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAG............................................................................221147.00147.0033.0022.005.00-3.00-6.003.002.001.003.00--1.00--2.004.00---2.004.00--4.003.00--1.003.002.00-3.001.00-2.003.00--1.002.00-1.001.00-2.00-1.001.001.00-2.00---1.002.001.001.00----1.00-1.00---1.001.00-1.00--------1.00--1.00--------1.00-1.00-----------1.00---1.001.00--1.00-------------------1.00---1.00--1.00--1.00--------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTG................................................................................................................22133.0033.001.001.00-6.003.00-1.00----2.002.00--4.00--1.005.001.00---1.00---1.00----------2.00--------------------------------------------------------------1.00--------1.00-------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGT...............................................................................................................23132.0033.00---7.004.00-3.00-----6.00---------1.003.00-1.00-1.00----------1.00--------------------------------------1.00-----1.00--------------------------1.00-------------1.00--1.00---------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAGT...........................................................................23127.00147.00-5.00-2.00------3.00--1.001.00--------------1.001.00----------------2.00---2.00------1.00------1.00---------------------1.00-----1.00------------1.00------------1.00--1.00---------1.00------------------1.00---
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAGA...........................................................................23126.0026.001.002.003.00---1.002.00------2.00-2.002.00---2.00----------1.00-----1.00-----------1.00-------------1.001.00--------1.00---------------1.00------------------1.00-----------------------1.00---------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGA...............................................................................................................23123.0033.001.00-10.00-1.00--1.003.00-------1.00---1.00---1.00--------------1.00--------------------------1.00-1.00-------1.00------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGT.................................................................................................................21121.0021.001.00--1.003.00--2.003.00--2.00------1.00--------1.002.00---------1.00------------------------1.00-----------1.00---------------------1.00--------------------------------------------------1.00------
...................................................................................................................GGTGGGTGCTGGTGGGAGCC...................................................................................................................20115.0015.00-----15.00-----------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAT............................................................................22111.002.005.00--------1.00----------------------1.00-------------------------------------------------------------------1.00---------------------------------1.00--------------1.001.00----
....................................................................................................................GTGGGTGCTGGTGGGAGCCG..................................................................................................................20111.0011.001.002.00-1.00--------------2.00----------------------------------2.00------------------1.00--------------------------1.00--------------------------------------1.00----------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCG..................................................................................................................2119.009.00-3.00---------------------2.00--1.00-1.00----------------1.00-------------1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCTCTCTCCCTCACCCTAGA...........................................................................2219.009.00--7.00----1.00--------------------------------1.00------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCTCTCTCCCTCACCCTAGT...........................................................................2217.003.00-------------------------------------------------------------------------------1.00---------------------------1.00------1.00---1.00----------1.00------------1.00-1.00----------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCT..............................................................................2016.006.001.00------------3.00----------------------------------------1.00-----------------------1.00----------------------------------------------------------------------------
.....................................................................................................................TGGGTGCTGGTGGGAGCCGT.................................................................................................................2015.005.00-----------1.00--------2.00---2.00----------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACC................................................................................1814.004.00--4.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGC....................................................................................................................1914.004.00---3.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGTT..............................................................................................................2414.0033.00-----------1.00------------------------------------------1.001.00-----------------------------------------------------------------1.00---------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAA............................................................................2214.002.001.00----------------------------------2.00---------------------------------------------------------------------------------------1.00-------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGTTA.............................................................................................................2514.0033.00--------------4.00--------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAAAAT..................................................................................................................204.000.00---4.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTGT...............................................................................................................243.000.00---------------------------------------------------------------------------------1.00-------1.00---------------------------------------------------1.00-------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGT.................................................................................................................2213.003.00---------------------------1.00-----------------------------------1.00-----------------------------------------------------------------------1.00-------------------
...........................................................................................................................................................GCTCTCTCCCTCACCCTAG............................................................................1913.003.00--------3.00--------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCCAG............................................................................2213.002.00---------2.00-------------------1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTT................................................................................................................2213.0021.00----------------1.00-1.00--------------------------------------------------------------------------------------------------------------------------------1.00-------
.....................................................................................................................TGGGTGCTGGTGGGAGCCGTGC...............................................................................................................2213.003.00-2.00--1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCTCTCTCCCTCACCCTAG............................................................................2113.003.001.00--------1.00---------------------------------------------------------1.00---------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGA....................................................................................................................192.000.00--------------------1.00---1.00----------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................ATTCGGCTCTCTCCCG....................................................................................162.000.00----------------------------------2.00------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAC............................................................................2212.002.00---------1.00-----------------------------------------------------------------------------------------------------------1.00-------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTAA...............................................................................................................2312.0021.00---------------------------1.00---------------------------------------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCC...............................................................................1912.002.00--2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTA.............................................................................2112.002.001.00-----------------------------------------------1.00----------------------------------------------------------------------------------------------------------
..ATCGTGGTCTCCTGTGCGGCTGG.................................................................................................................................................................................................................................2312.002.00-------------------------------------------------------------2.00---------------------------------------------------------------------------------------------
............................................................................................................................................................CTCTCTCCCTCACCCTAG............................................................................1812.002.00--------------------------------1.00--------------------------------------------------------------1.00-----------------------------------------------------------
......................................................................................................................GGGTGCTGGTGGGAGCCG..................................................................................................................1822.002.00---------------------------------------------------------------------1.50-----------------------------------------------------------------------------------0.50-
....................................................................................................................GTGGGTGCTGGTGGGAGCCGA.................................................................................................................2112.0011.00---------------------------------------------1.00--------------1.00----------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGC...............................................................................................................2312.002.00--------------------------------------------------------1.00-----1.00--------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................TGTGGTAGTGCAGGAAGGCG2011.001.00-----------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
......................................................................................................................................................................................................................................TGTGGTAGTGCAGGAAGGC.1911.001.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTTTT...........................................................................2311.006.00----------------------------------------------------------------------------------------------------------------------------------1.00------------------------
...........................................................................................................................................................................................................AGTGATTCGCTGCATGACCTT..........................211.000.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCAAG............................................................................2211.002.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGC....................................................................................................................1811.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................AGTGATTCGCTGCATGACCA...........................2011.001.00-------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTA................................................................................................................2211.0021.00--------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................CCCCAAAGTGATTCGCTGCATGACCAAC.........................2811.001.00--------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGA.................................................................................................................2211.009.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTATT...........................................................................2311.002.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTCAA..............................................................................................................2411.0021.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
.CATCGTGGTCTCCTGTGCGGCTGG.................................................................................................................................................................................................................................2411.001.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................GGGTGGGTGCTGGTGGGAGCCGT.................................................................................................................2311.001.00-------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGAAAA.................................................................................................................221.000.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCAG.............................................................................2111.002.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.......GGTCTCCTGTGCGGCGTTG................................................................................................................................................................................................................................191.000.00------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTAA...............................................................................................................2411.003.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................AATGGGTGGGTGCTGGTGGGAGC....................................................................................................................2311.001.00-----------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTAT...............................................................................................................2411.003.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCTTAT............................................................................2211.004.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................ATGGGTGGGTGCTGGTGGGAGCCG..................................................................................................................2411.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..............TGTGCGGCTGGTGTCACCATC.......................................................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------------------------------------------1.00----------------------------------
..............................................................................................................TAATGGGTGGGTGCTGGTGGGAGCCG..................................................................................................................2611.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTAAT..............................................................................................................2511.003.00-------------------------------------------------------------------------------------------------------1.00---------------------------------------------------
........................................................................................................................................................................................................CAAAGTGATTCGCTGCATGACCA...........................2311.001.00--------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
..............................................................................................................................................................................................................GATTCGCTGCATGACCAACACAC.....................2311.001.00-----------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
..............................CCATCAGCTCTGTGGAGAAGA.......................................................................................................................................................................................................211.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGTAA.............................................................................................................2511.0033.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................................TTCGGCTCTCTCCCTCACCCTAG............................................................................2311.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...............................CATCAGCTCTGTGGAGAAG........................................................................................................................................................................................................1911.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................CTTGTGTGAGGGGAGGGTTGA...........................................................................................................................................................2111.001.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGAAGA..............................................................................................................2411.0011.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
......................TGGTGTCACCATCAGCTCTGTGGAGAAGAAG.....................................................................................................................................................................................................311.000.00----------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................TCCCTCACCCTAGAAGCTCACG...................................................................221.000.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................GGCTCTCTCCCTCACCCTAGTT..........................................................................221.000.00----------------------------------------1.00------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................CGGCTCTCTCCCTCACCCTAGAT..........................................................................2311.009.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCCA.............................................................................2111.002.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTTAA..............................................................................................................2411.0021.00--------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTGA...............................................................................................................241.000.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTTA...............................................................................................................2311.0021.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................TCAGCTCTGTGGAGAAGGT......................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................GGGTGGGTGCTGGTGGGGGGT...................................................................................................................211.000.00---------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCA...............................................................................1911.004.00-----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................TAATGGGTGGGTGCTGGTGGGAGCCGTTT...............................................................................................................291.000.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTT................................................................................................................2311.003.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCCAGT...........................................................................2311.002.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
......................................................................................................................GGGTGCTGGTGGGAGCCGTGC...............................................................................................................2111.001.00-------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
..........................................................................................................................................................................................................AAGTGATTCGCTGCATGACCAACA........................2411.001.00------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
..................CGGCTGGTGTCACCATCAG.....................................................................................................................................................................................................................1911.001.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGTGGGTGCTGGTGGGAGCCGTCAT..............................................................................................................2511.003.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AAGTGATTCGCTGCATGACCAACACACC....................2811.001.00-----------------------------------------------------------------------------------------------------------------------------------------1.00-----------------
....................................................................................................................GTGGGTGCTGGTGGGAGCCGTGTG..............................................................................................................2411.0033.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCGGCTCTCTCCCTCACCCTAGAA..........................................................................2411.001.00----------------------------------------------------------------------------------------1.00------------------------------------------------------------------
.....................................................................................................................TGGGTGCTGGTGGGAGCCGTG................................................................................................................2111.001.00------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
................................................................................................................ATGGGTGGGTGCTGGTGGGAGCCGTGT...............................................................................................................271.000.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................GTGGGTGCTGGTGGGAG.....................................................................................................................1730.670.67--------------------------0.67--------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................GGTGCTGGTGGGAGCCG..................................................................................................................1720.500.50-----------------------------------------0.50-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................TGGGTGCTGGTGGGAGC....................................................................................................................1750.200.20----------------------------------------------------------------------------------------------------------------------------------------------------------0.20
..............................................................................................................................................................CTCTCCCTCACCCTAG............................................................................1660.170.17-0.17---------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
ACATCGTGGTCTCCTGTGCGGCTGGTGTCACCATCAGCTCTGTGGAGAAGGTGCCCATCTCAGCCCTGATGCCCCTTGTGTGAGGGGAGGGTTGACCCACGAATGGCAGCTAATGGGTGGGTGCTGGTGGGAGCCGTGCCCTGGCCACTCATTCGGCTCTCTCCCTCACCCTAGAAGCTGATGGCATTCCAGCCAGCCCCCAAAGTGATTCGCTGCATGACCAACACACCTGTGGTAGTGCAGGAAGGCG
..................................................................................................................(((((((....((.((((((((.((....))........)))))))).)))))))))...............................................................................
...............................................................................................................112...............................................................178......................................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189787DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR037936(GSM510474)
293cand1. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR189783SRR189785SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
GSM339995(GSM339995)
hues6NP. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
GSM339994(GSM339994)
hues6. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR191462(GSM715572)
1genomic small RNA (size selected RNA from to. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
TAX577746(Rovira)
total RNA. (breast)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR343336SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
TAX577739(Rovira)
total RNA. (breast)
SRR191620(GSM715730)
167genomic small RNA (size selected RNA from . (breast)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335TAX577579(Rovira)
total RNA. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
GSM339996(GSM339996)
hues6Neuron. (cell line)
SRR191530(GSM715640)
132genomic small RNA (size selected RNA from . (breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM541796(GSM541796)
undifferentiated human embryonic stem cells. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191585(GSM715695)
196genomic small RNA (size selected RNA from . (breast)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR029131(GSM416760)
MCF7. (cell line)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR029125(GSM416754)
U2OS. (cell line)
SRR040015(GSM532900)
G623T. (cervix)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
...........................................................................................TTGACCCACGAATGGTGG............................................................................................................................................. 181.000.00--------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................................................CCAGCCAGCCCCCAACGGG........................................... 191.000.00------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................CCAGCCAGCCCCCAACGGA........................................... 191.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................AGGGCTGAGATGGGCACC....................................................................................................................................................................................... 1821.001.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
..........................................................................................................................................................GGCTCTCTCCCTCACCACAG............................................................................ 201.000.00--------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
.......................................................................................................................................................................................................................CATGACCAACACACCTCTT................ 191.000.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.......................CAGAGCTGATGGTGACACC................................................................................................................................................................................................................ 1911.001.00------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
..........................GTCACCATCAGCTCTCGC.............................................................................................................................................................................................................. 181.000.00-------------------------------------------------------------------------------------------1.00---------------------------------------------------------------
.................................................CAGGGCTGAGATGGGCACC...................................................................................................................................................................................... 1920.500.50--------------------------------------------------------------------------------------------------------------------------------------------------------0.50--