ID: uc010pvi.1_intron_4_0_chr1_226059754_r.3p
GENE: TMEM63A(2)
chr1:226059704-226059953-


(1)
B-CELL 		(1)
BRAIN 		(2)
BREAST 		(8)
CELL-LINE 		(3)
CERVIX 		(1)
HELA 		(3)
LIVER 		(2)
OTHER 		(1)
SKIN 		(1)
UTERUS

Sense strand
TACCATGCCTGGGAATGGTCATTGTCCTTGTCTCTATCTTTCACAGAGTGAGTTATATTTTGTCCCAGCCATCGAGGGCTGGTAGCTTTGGTTCTGAGCTCCAAGAGGCAGCAAAATACTGGATGTGATCTTTTTGACTTGTTTGGCTTTTTTTTTTTTCTAAGAATTATCTGTCATTTTTTTTCTTTTTGTGTCTCTAGCGAGTCCAGATTTCAGAGATTGTCATCGACTTCCTCCTCAGGTCAACAAG
...............................................................................................(((((....(((....((((((((.....)))....))))).)))....))))).....................................................................................................
..............................................................................................95........................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532883(GSM532883)
G871N. (cervix)		SRR189783SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040039(GSM532924)
G531T. (cervix)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR040035(GSM532920)
G001T. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTTTGG.....................................................................................235.000.002.003.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTGG.......................................................................................214.000.001.003.00----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCGG........................................................................................212.000.002.00-----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTGGC.........................................................................................202.000.001.001.00----------------------
...................CATTGTCCTTGTCTCGGTC....................................................................................................................................................................................................................192.000.00--1.00-----------------1.00---
...................CATTGTCCTTGTCTCGGT.....................................................................................................................................................................................................................182.000.00-------------1.00---1.00------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCGGT.......................................................................................212.000.00-2.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTGGTC.....................................................................................232.000.002.00-----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTGGTC........................................................................................202.000.002.00-----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTGGTT.....................................................................................232.000.00-2.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTGGAG.....................................................................................231.000.00-1.00----------------------
...............................................................................................................................................TGGCTTTTTTTTTTTTCTAGGT.....................................................................................221.000.001.00-----------------------
..........................................................................................................................................TTGTTTGGCTTTTTTTTTCC............................................................................................201.000.001.00-----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCTGG.......................................................................................221.000.001.00-----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTGGC......................................................................................221.000.001.00-----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTTGGC.....................................................................................231.000.00-1.00----------------------
........................................................................................................................................................................ATCTGTCATTTTTTTTCTTTTTGTG.........................................................2511.001.001.00-----------------------
...............................................................................................................................................TGGCTTTTTTTTTTTTCTGGGG.....................................................................................221.000.001.00-----------------------
..........................................................................................................................................TTGTTTGGCTTTTTTTTTGG............................................................................................201.000.00-1.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCGG........................................................................................201.000.00-1.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTTGGT.....................................................................................231.000.00-1.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTGGCC.....................................................................................231.000.00-1.00----------------------
....................ATTGTCCTTGTCTCTGG.....................................................................................................................................................................................................................171.000.00---------------1.00--------
.............................................................................................................................................TTTGGCTTTTTTTTTTTGGAC........................................................................................211.000.001.00-----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCCGGC......................................................................................221.000.001.00-----------------------
...............................................................................................................................................TGGCTTTTTTTTTTTTCTGTG......................................................................................211.000.00-1.00----------------------
..................................................................................................................................................CTTTTTTTTTTTTCTAACGG....................................................................................201.000.00------1.00-----------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCTAAATT....................................................................................251.000.001.00-----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTGGCC........................................................................................211.000.00-1.00----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCTTTCG.....................................................................................241.000.001.00-----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCTCTTA.....................................................................................241.000.00-1.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCGCTG......................................................................................221.000.00-1.00----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCTTGG......................................................................................231.000.00-1.00----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTGGG.........................................................................................201.000.00-1.00----------------------
...................CATTGTCCTTGTCTCGG......................................................................................................................................................................................................................171.000.00---------------------1.00--
.............................................................................................................................................................................................................................GTCATCGACTTCCTCGGT...........181.000.00----------1.00-------------
..............................................................................................................................................TTGGCTTTTTTTTTTTGGTA........................................................................................201.000.001.00-----------------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCCCC.......................................................................................221.000.00-1.00----------------------
...................................................................................................TCCAAGAGGCAGCAAAAT.....................................................................................................................................1811.001.00-------------------1.00----
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTTCAC.....................................................................................231.000.001.00-----------------------
................................................................................................................................................GGCTTTTTTTTTTTTCTGCAG.....................................................................................211.000.001.00-----------------------
......................................................................................................................................................................................................................AGAGATTGTCATCGACTTCCT...............2111.001.00---1.00--------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTGCCG.....................................................................................231.000.00-1.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTGCGG........................................................................................201.000.001.00-----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTTGTA.....................................................................................231.000.001.00-----------------------
.....................................................................CATCGAGGGCTGGTAGCTCTG................................................................................................................................................................211.000.00-----------1.00------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTGGT......................................................................................221.000.001.00-----------------------
................................................................................................................AAAATACTGGATGTGATGGA......................................................................................................................201.000.00---1.00--------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTGCTC........................................................................................201.000.001.00-----------------------
..........................................................................................................................................TTGTTTGGCTTTTTTTGAG.............................................................................................191.000.001.00-----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTATCAG....................................................................................241.000.00-1.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTTGGG.....................................................................................231.000.00-1.00----------------------
.........................................................................................................................................CTTGTTTGGCTTTTTTTTTTG............................................................................................211.000.00-1.00----------------------
.................................................................................................................................................GCTTTTTTTTTTTTCGATC......................................................................................191.000.00----------------------1.00-
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTTGAC.....................................................................................231.000.00-1.00----------------------
...........................................................................................................................................TGTTTGGCTTTTTTTTTTTTCG.........................................................................................221.000.001.00-----------------------
........................................................................................................................................ACTTGTTTGGCTTTTTTTTTTTTCC.........................................................................................251.000.00-1.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTATT......................................................................................221.000.001.00-----------------------
..............................................................................................................................................................................................................CAGATTTCAGAGATTGTCATCGACTTC.................2711.001.00------------1.00-----------
...................CATTGTCCTTGTCTCGGTG....................................................................................................................................................................................................................191.000.00--1.00---------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCCTGG......................................................................................221.000.00-1.00----------------------
...........................................................................................................................................................................................................GTCCAGATTTCAGAGTTAG............................191.000.00----------------1.00-------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCGGA.......................................................................................221.000.001.00-----------------------
...............................................................................................................................................................................................................AGATTTCAGAGATTGTCATCGACTTCAA...............281.000.00--------1.00---------------
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCTGGC......................................................................................231.000.00-1.00----------------------
..............................................................................................................................................TTGGCTTTTTTTTTTTTCTCGG......................................................................................221.000.001.00-----------------------
........................................................................................................................................ACTTGTTTGGCTTTTTTTTTTCTC..........................................................................................241.000.001.00-----------------------
...............................................................................................................................................TGGCTTTTTTTTTTTTCGGTC......................................................................................211.000.001.00-----------------------
........................................................................................................................................ACTTGTTTGGCTTTTTTTTTTTTTCC........................................................................................261.000.001.00-----------------------
...............................................................................................................................................TGGCTTTTTTTTTTTTCTAAG......................................................................................2120.500.500.50-----------------------

Antisense strand
TACCATGCCTGGGAATGGTCATTGTCCTTGTCTCTATCTTTCACAGAGTGAGTTATATTTTGTCCCAGCCATCGAGGGCTGGTAGCTTTGGTTCTGAGCTCCAAGAGGCAGCAAAATACTGGATGTGATCTTTTTGACTTGTTTGGCTTTTTTTTTTTTCTAAGAATTATCTGTCATTTTTTTTCTTTTTGTGTCTCTAGCGAGTCCAGATTTCAGAGATTGTCATCGACTTCCTCCTCAGGTCAACAAG
...............................................................................................(((((....(((....((((((((.....)))....))))).)))....))))).....................................................................................................
..............................................................................................95........................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532883(GSM532883)
G871N. (cervix)		SRR189783SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040039(GSM532924)
G531T. (cervix)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR040035(GSM532920)
G001T. (cervix)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577743(Rovira)
total RNA. (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
.........................................................................................................................................................................TCTGTCATTTTTTTTCGAGA............................................................. 201.000.00--------------1.00---------
...................AAGATAGAGACAAGGACAATG.................................................................................................................................................................................................................. 2111.001.00-----1.00------------------
......................................................................................................AAGAGGCAGCAAAATACC.................................................................................................................................. 181.000.00------------------1.00-----
.............................................................................................................................................TTTGGCTTTTTTTTTTTTCGAC....................................................................................... 221.000.00----1.00-------------------
.......................................TTCACAGAGTGAGTTATGC................................................................................................................................................................................................ 191.000.00-------1.00----------------
..............................................................................................................................................................................................................................TCATCGACTTCCTCCTAA.......... 181.000.00---------1.00--------------
..............................................................................................................................................................................................................CAATCTCTGAAATCTG............................ 1660.170.17-----------------------0.17