| (1) B-CELL | (8) CELL-LINE | (1) OTHER | (1) UTERUS | (1) XRN.ip |
| AGACATATGTAAATGGAAAACATATTTTGGAAATCACAGTATTACGTCATGTAAGTGGATGGGTGCTATAATATAAGAAACTGTTCGACTTTGGATAAGTCATTTAATTTCTTTGAGTTCTGGTTTTCTCTATAAGATAAGGGTGTTGAAGCAGATTAAGGACTTTTTCATTTCAAAAATTCTTTTTCCTATTAATTGCTTTCTTGTGCAAAGACAAAAGTTACATTTATATGAATCAGTACCTGAAGAG ..........................................................................(((((....((.((...((((.(((((.((((((((((((((..(((.....(((.....)))...)))..)))))).))))))))))))).))))..)).))..))))).................................................................. .........................................................................74..................................................................................................................190.......................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR343334 | SRR343335 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR029126(GSM416755) 143B. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................AACTGTTCGACTTTGGG........................................................................................................................................................... | 17 | 109.00 | 0.00 | - | - | 101.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................AAACTGTTCGACTTTGGG........................................................................................................................................................... | 18 | 38.00 | 0.00 | - | - | 21.00 | 10.00 | 7.00 | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................ACTTTTTCATTTCAAAAATTCTTTT................................................................ | 25 | 1 | 3.00 | 3.00 | - | - | - | - | - | 2.00 | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................AACTGTTCGACTTTGGGATC........................................................................................................................................................ | 20 | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | |
| .............................................................................AAACTGTTCGACTTTGGGATC........................................................................................................................................................ | 21 | 2.00 | 0.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................AAGATAAGGGTGTTGAAGCTC................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| .................................................................................................................................................................ACTTTTTCATTTCAAAAATTCTTTC................................................................ | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................CAGATTAAGGACTTTAGTT................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .................................................................................................................................................................ACTTTTTCATTTCAAAAATTCTTCT................................................................ | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...................................................................................................................................................GAAGCAGATTAAGGACTTTTTCA................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................TTTAATTTCTTTGAGTTCTGGTTTTCCCC....................................................................................................................... | 29 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ATTCTTTTTCCTATTATATA.................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ...................................................................................................TCATTTAATTTCTTTGAGTTCTGGTC............................................................................................................................. | 26 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .................................................................................................................................................................ACTTTTTCATTTCAAAAATTCCTTT................................................................ | 25 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .............................................................................AAACTGTTCGACTTTGGGA.......................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .................................................................................................AGTCATTTAATTTCTTTGAGTTCTGGTTTTCTC........................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| AGACATATGTAAATGGAAAACATATTTTGGAAATCACAGTATTACGTCATGTAAGTGGATGGGTGCTATAATATAAGAAACTGTTCGACTTTGGATAAGTCATTTAATTTCTTTGAGTTCTGGTTTTCTCTATAAGATAAGGGTGTTGAAGCAGATTAAGGACTTTTTCATTTCAAAAATTCTTTTTCCTATTAATTGCTTTCTTGTGCAAAGACAAAAGTTACATTTATATGAATCAGTACCTGAAGAG ..........................................................................(((((....((.((...((((.(((((.((((((((((((((..(((.....(((.....)))...)))..)))))).))))))))))))).))))..)).))..))))).................................................................. .........................................................................74..................................................................................................................190.......................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR343334 | SRR343335 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR207116(GSM721078) Nuclear RNA. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex) | SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR094131(GSM651907) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR029126(GSM416755) 143B. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................AGTGGATGGGTGCTAATG................................................................................................................................................................................... | 18 | 1121.00 | 0.00 | 549.00 | 572.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTGGATGGGTGCTAATGA.................................................................................................................................................................................. | 19 | 81.00 | 0.00 | 47.00 | 34.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTGGATGGGTGCTAATGT.................................................................................................................................................................................. | 19 | 48.00 | 0.00 | 25.00 | 23.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTGGATGGGTGCTAACG................................................................................................................................................................................... | 18 | 16.00 | 0.00 | 12.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTGGATGGGTGCTAACGA.................................................................................................................................................................................. | 19 | 3.00 | 0.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTGGATGGGTGCTATATG.................................................................................................................................................................................. | 19 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................AGATAAGGGTGTTGAAAG.................................................................................................. | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTGGATGGGTGCTAAGG................................................................................................................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................CATTTCAAAAATTCTGCT................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .....................................................AGTGGATGGGTGCTAGTG................................................................................................................................................................................... | 18 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTGGATGGGTGCTAACGT.................................................................................................................................................................................. | 19 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................AGTGGATGGGTGCTAATGC.................................................................................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |