ID: uc010pki.1_intron_3_0_chr1_161179386_f
GENE: (4)
chr1:161179336-161179696+


(2)
AGO2.ip 		(1)
AGO3.ip 		(5)
B-CELL 		(3)
BRAIN 		(10)
BREAST 		(23)
CELL-LINE 		(3)
CERVIX 		(5)
HEART 		(3)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(3)
OTHER 		(24)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
ACCTTGGGGCCATGACCCCTTTCTTCTGGCTGTTTGAAGAAAGGGAGAAGGTAAGAGTGGGAGGAAAGGATAGGAATAGGGAAGGAAGTGCAGGAAGTAGAGAAGGTATAAAGGAGACAGGAGATTAAAAGAAGAGAGAGAACATGGGAGAACATTTAGAGGGGGAAGGTATGTTTAACTTGGGTTATATTTGTAGAAACTATATCATGAGGGGTTGGTTGGGCACAAGAAGGCAGAAAGTGGGGGAGTAGGCCATCATAGGACCTGGGGGCCTGGGACTTTGACACTAATTCCCAGCACGTTCTATGAAGATGTTTGAGTTCTACGAGCGAGTGTCTGGAGCCCGAATGCATGCTGCTTA
...............................................................................................................................................................................................................................................(((.((((((.((...(((.((..(((((....))))).)).)))..)).))))))..))).............................................................
...............................................................................................................................................................................................................................................240....................................................................311................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189786SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR343336SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343337SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189783SRR189782SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................................................................................................................................................................................................................................................TTCCCAGCACGTTCTATGAAGT.................................................22120.003.00--1.00-----------------------2.001.001.00-2.00-----2.001.00-2.001.00--------------------1.00--1.00-----1.00-----1.00--1.00----1.00-1.00-------------
.........................CTGGCTGTTTGAAGAAAGGG............................................................................................................................................................................................................................................................................................................................20113.0013.0011.00----1.00-----------------------------------------------------------------------------------1.00----------
..................................................................................................................................................................................................................................................................................................TTCCCAGCACGTTCTATGAAGA.................................................2218.008.00----5.00---------3.00-------------------------------------------------------------------------------------
..........................TGGCTGTTTGAAGAAAGGG............................................................................................................................................................................................................................................................................................................................1918.008.008.00---------------------------------------------------------------------------------------------------
..........................TGGCTGTTTGAAGAAAGGGAG..........................................................................................................................................................................................................................................................................................................................2114.004.00----------1.00------------------------------2.00---------------------------------1.00------------------------
..........................TGGCTGTTTGAAGAAAGGGAGA.........................................................................................................................................................................................................................................................................................................................2214.004.00-------------------1.00---------1.00-----------------------------------1.00--------------------------1.00-------
..................................................................................................................................................................................................................................................................................................TTCCCAGCACGTTCTATGAAG..................................................2113.003.00---------1.00------------------------------------1.00--------------------------------------1.00--------------
...........................................................................................................................................................................................................................................................................................................................................AGTGTCTGGAGCCCGAATGCAT........2213.003.00-1.00-----2.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................GCGAGTGTCTGGAGCCCGAATGCATG.......2613.003.00--1.00---2.00---------------------------------------------------------------------------------------------
..........................TGGCTGTTTGAAGAAAGGGA...........................................................................................................................................................................................................................................................................................................................2013.003.00-------------------1.00------------------1.00----------1.00--------------------------------------------------
..........................TGGCTGTTTGAAGAAAGGGAGAAGA......................................................................................................................................................................................................................................................................................................................252.000.00-----------------------------------1.00------------1.00---------------------------------------------------
.......................TTCTGGCTGTTTGAAGAAAGGGAG..........................................................................................................................................................................................................................................................................................................................2412.002.00-------------------------------------------1.00--------------------------------------1.00-----------------
....................................................................................................................................................................................................................................................GGAGTAGGCCATCATAGGACCTGG.............................................................................................2412.002.00-----2.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................ACGAGCGAGTGTCTGGAGCCCGA..............2312.002.00---1.00----------------------------1.00-------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................AGTGTCTGGAGCCCGAATGCATG.......2312.002.00--------------------------------------------1.00--------------1.00----------------------------------------
.........................CTGGCTGTTTGAAGAAAG..............................................................................................................................................................................................................................................................................................................................1812.002.00----------------1.00---------------------------------------------------1.00-------------------------------
..........................................................................................................................................................................................................................................................................................................................TTTGAGTTCTACGAGCGAGTGTCTGG.....................2612.002.00------------2.00---------------------------------------------------------------------------------------
.........................CTGGCTGTTTGAAGAAAGGGAG..........................................................................................................................................................................................................................................................................................................................2212.002.00-----1.00----------------1.00-----------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................CTACGAGCGAGTGTCTGG.....................1811.001.00---------------------------------1.00------------------------------------------------------------------
.........................................................................GAATAGGGAAGGAAGTGCAGGAAGTAGAGA..................................................................................................................................................................................................................................................................3011.001.00-------------------------------1.00--------------------------------------------------------------------
..........................................GGGAGAAGGTAAGAGTG..............................................................................................................................................................................................................................................................................................................1711.001.00--------------------------------------1.00-------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................CGAGTGTCTGGAGCCCGAATGCATA.......251.000.00-1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................TTTGTAGAAACTATATCATGAGGGGTT.................................................................................................................................................2711.001.00-------------------------------------------------------------------------1.00--------------------------
.......................................................................................................................................................................................................................................................................................................................................................CCGAATGCATGCTGCCATC191.000.00---------------------------------------------------------1.00------------------------------------------
.........................................................................................GCAGGAAGTAGAGAAGGT..............................................................................................................................................................................................................................................................1821.001.00-------1.00--------------------------------------------------------------------------------------------
................................TTTGAAGAAAGGGAGAAG.......................................................................................................................................................................................................................................................................................................................1811.001.00--------1.00-------------------------------------------------------------------------------------------
................................................................................................................................AAGAAGAGAGAGAACATGGGAGAA.................................................................................................................................................................................................................2411.001.00------1.00---------------------------------------------------------------------------------------------
........................TCTGGCTGTTTGAAGAAAGGGAGAAGATGT...................................................................................................................................................................................................................................................................................................................3011.001.00----------1.00-----------------------------------------------------------------------------------------
....................TTCTTCTGGCTGTTTGAAGAAAGGGAGAAGATG....................................................................................................................................................................................................................................................................................................................331.000.00-------------------------------1.00--------------------------------------------------------------------
.......................TTCTGGCTGTTTGAAGAAAGGGAGAAGA......................................................................................................................................................................................................................................................................................................................2811.001.00------------------1.00---------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................ACGAGCGAGTGTCTGGAGCCCGAATGCA.........2811.001.00--1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................TATATTTGTAGAAACTATATCATGAGGGG...................................................................................................................................................2911.001.00------------------------------------------1.00---------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TTCCCAGCACGTTCTATG.....................................................1821.001.00-------------------------------------------------------------------------------------------------0.500.50-
.....................................................................................................................................................................................................................................................................................................................................CGAGCGAGTGTCTGGAGC..................1811.001.00----------------------------------1.00-----------------------------------------------------------------
..................................................................................AGGAAGTGCAGGAAGTAGAA...................................................................................................................................................................................................................................................................201.000.00----------------------------------------------------------------------------------------1.00-----------
...............................GTTTGAAGAAAGGGAGAAGATG....................................................................................................................................................................................................................................................................................................................221.000.00--------1.00-------------------------------------------------------------------------------------------
...........................................................................................AGGAAGTAGAGAAGGCTCC...........................................................................................................................................................................................................................................................191.000.00-------------------------------------------------------------------1.00--------------------------------
.........................................................................................................................................................................................................................................................................TGGGGGCCTGGGACTGACG.............................................................................191.000.00-------------------------------------1.00--------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................ACGAGCGAGTGTCTGGAGCC.................2011.001.00------------------------------------------------------1.00---------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................TCTGGAGCCCGAATGC..........1611.001.00-----------1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................GTCTGGAGCCCGAATGCATGCTGCTCAT281.000.00---------------------1.00------------------------------------------------------------------------------
........................TCTGGCTGTTTGAAGAAAGGGAGAAG.......................................................................................................................................................................................................................................................................................................................2611.001.00-----1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................AGTGTCTGGAGCCCGAATGCATGCTGCTT.2911.001.00--------------------------------------------------------------1.00-------------------------------------
.........................CTGGCTGTTTGAAGAAAGGGA...........................................................................................................................................................................................................................................................................................................................2111.001.00-------1.00--------------------------------------------------------------------------------------------
.....................................................................................................GAAGGTATAAAGGAGACAGGAGATTAAA........................................................................................................................................................................................................................................2811.001.00----------------------------------------1.00-----------------------------------------------------------
.........................................................................................GCAGGAAGTAGAGAAGGTATAAAGGAGACAGG................................................................................................................................................................................................................................................3211.001.00------------------------------------------------------------------------------------------1.00---------
.....................TCTTCTGGCTGTTTGAAGAAAGGGA...........................................................................................................................................................................................................................................................................................................................2511.001.00----------------------------------------------------1.00-----------------------------------------------
.........................CTGGCTGTTTGAAGAAAGGGAGAAG.......................................................................................................................................................................................................................................................................................................................2511.001.00----------------------------1.00-----------------------------------------------------------------------
......................CTTCTGGCTGTTTGAAGAAAGG.............................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------------------------------1.00----------------------------------------------
.............................................................................................................................................................................................................................................................CATCATAGGACCTGGGGGCCTGGGACT.................................................................................2711.001.00---------------------------------------------------------------------------------------------1.00------
.............................................................................................................................................................................................................................................................CATCATAGGACCTGGGGGCCTGGA....................................................................................241.000.00---------------------------------------------------------------------------------------1.00------------
.........................CTGGCTGTTTGAAGAAAGGGAGA.........................................................................................................................................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------1.00----------------------------
.................................................................................................................................................................................................................................................................................................................................................TGGAGCCCGAATGCATGCTGCCC.231.000.00---1.00------------------------------------------------------------------------------------------------
..................................................GTAAGAGTGGGAGGAAAAAA...................................................................................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------1.00----------------------
.................................................................................................................................................................................................................................................................................................................................................TGGAGCCCGAATGCATGCT.....1911.001.00-------------1.00--------------------------------------------------------------------------------------
............................................................................................................................................................TAGAGGGGGAAGGTAATTG..........................................................................................................................................................................................191.000.00------------------------------------------------------------------1.00---------------------------------
..........................TGGCTGTTTGAAGAAAGG.............................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------------------------------1.00-----
.........................CTGGCTGTTTGAAGAAA...............................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------1.00------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TTTGAGTTCTACGAGCG..............................1711.001.00--1.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................GTGGGGGAGTAGGCCATTGCC.....................................................................................................211.000.00-----------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................AGCGAGTGTCTGGAGCCCGA..............2011.001.00----------------------1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................AGCCCGAATGCATGCTGCTCAT221.000.00---------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................TGTCTGGAGCCCGAATGCATGCTGCTCA281.000.00---1.00------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................CTGGAGCCCGAATGCATGCTGCTCAT261.000.00---1.00------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................GCGAGTGTCTGGAGCCCGAATGGA.........241.000.00------1.00---------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................TCCCAGCACGTTCTATGAAGA.................................................2111.001.00----------1.00-----------------------------------------------------------------------------------------
........................TCTGGCTGTTTGAAGAAAGG.............................................................................................................................................................................................................................................................................................................................2011.001.00---------------1.00------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................CGAGTGTCTGGAGCCCGAATGCATG.......2511.001.00-1.00--------------------------------------------------------------------------------------------------
..........................TGGCTGTTTGAAGAAAGGAGA..........................................................................................................................................................................................................................................................................................................................2111.001.00------------1.00---------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................AGTTCTACGAGCGAGTGTCT.......................2011.001.00-1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................AGAAGAGAGAGAACATGGGAGAACAA..............................................................................................................................................................................................................261.000.00-----------------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................AAGATGTTTGAGTTCTACGAGCGAGTG..........................2711.001.00---------1.00------------------------------------------------------------------------------------------
.......GGCCATGACCCCTTTCTTCT..............................................................................................................................................................................................................................................................................................................................................2011.001.00--1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................................................AACTTGGGTTATATTTGTAGAAACT................................................................................................................................................................2511.001.00-----------1.00----------------------------------------------------------------------------------------
................................TTTGAAGAAAGGGAGAAGGT.....................................................................................................................................................................................................................................................................................................................2011.001.00---------------------------1.00------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TTCCCAGCACGTTCTATGAAGTT................................................2311.003.00--------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................TGTCTGGAGCCCGAATGCATGC......2211.001.00--------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................AGCGAGTGTCTGGAGCA.................171.000.00---------------------------------------------------1.00------------------------------------------------
..........................TGGCTGTTTGAAGAAAGGGAGAAGATG....................................................................................................................................................................................................................................................................................................................271.000.00-----------------------------------1.00----------------------------------------------------------------
.........................CTGGCTGTTTGAAGAAAGAG............................................................................................................................................................................................................................................................................................................................2011.002.001.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TTCCCAGCACGTTCTATGAAC..................................................2111.001.00--------------------------------------------------------1.00-------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................TGTCTGGAGCCCGAATGC..........1811.001.00--------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................................................................................................................................................GGGGGCCTGGGACTTTGA.............................................................................1811.001.00---------1.00------------------------------------------------------------------------------------------
.........................CTGGCTGTTTGAAGAAAGGGAGAAGATGT...................................................................................................................................................................................................................................................................................................................2911.001.00---------------------------------------------------------------------------------1.00------------------
..................................................GTAAGAGTGGGAGGA........................................................................................................................................................................................................................................................................................................1501.001.00-------------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TTCCCAGCACGTTCTATGAAGC.................................................2211.003.00---1.00------------------------------------------------------------------------------------------------
.....................................................AGAGTGGGAGGAAAGGACTGC...............................................................................................................................................................................................................................................................................................211.000.00--------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TTCCCAGCACGTTCTATGAA...................................................2011.001.00------------------------------------------------------------------------------1.00---------------------
.......................................................................................................................................................................................................................................................................................................................................AGCGAGTGTCTGGAGCCCGAATGCATG.......2711.001.00------1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................GTGTCTGGAGCCCGAATGCATGCTGC...2611.001.00---------------------------------------------------------------1.00------------------------------------
........................TCTGGCTGTTTGAAGAAAGGGAGAAGATG....................................................................................................................................................................................................................................................................................................................2911.001.00-1.00--------------------------------------------------------------------------------------------------
.......................TTCTGGCTGTTTGAAGAAAGGGAGAAGATG....................................................................................................................................................................................................................................................................................................................3011.001.00-------------------------1.00--------------------------------------------------------------------------
..............ACCCCTTTCTTCTGGCTGTTTGAAG..................................................................................................................................................................................................................................................................................................................................2511.001.00-----------1.00----------------------------------------------------------------------------------------
.........................CTGGCTGTTTGAAGAAAGGGAGAAGAT.....................................................................................................................................................................................................................................................................................................................2711.001.00----------------1.00-----------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................GATGTTTGAGTTCTACGAGCGAGTGTCTGGAG...................3211.001.00---------------------------------------------------------------------1.00------------------------------
...............................................................................................................................................................................................................................................................................................................................................TCTGGAGCCCGAATGCAT........1811.001.00--------------------------------------------------------------------------------1.00-------------------
.............................................................................................................................................................................................................................................................CATCATAGGACCTGGGG...........................................................................................1711.001.00------------------------------------------------------------1.00---------------------------------------
...........................................................................................AGGAAGTAGAGAAGGTAAA...........................................................................................................................................................................................................................................................191.000.00-------------1.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................GTCTGGAGCCCGAATGCAT........1911.001.00---------------------------------------------1.00------------------------------------------------------
..........................TGGCTGTTTGAAGAAAGGGAGACGAC.....................................................................................................................................................................................................................................................................................................................2611.004.00---------------1.00------------------------------------------------------------------------------------
........................................................................................TGCAGGAAGTAGAGAAGGTTT............................................................................................................................................................................................................................................................211.000.00-----------------------------1.00----------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................AGCGAGTGTCTGGAGCCCGAATGCATGCT.....2911.001.00--1.00-------------------------------------------------------------------------------------------------
.......................TTCTGGCTGTTTGAAGAAAGGGAGAAG.......................................................................................................................................................................................................................................................................................................................2711.001.00------------------1.00---------------------------------------------------------------------------------
.........................CTGGCTGTTTGAAGAAAGGGGG..........................................................................................................................................................................................................................................................................................................................2211.0013.00-----------------------1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................ATCATAGGACCTGGGGGCCTGT.....................................................................................221.000.00--------------------------------------------------------------------------1.00-------------------------
.......................................................................AGGAATAGGGAAGGAGCC................................................................................................................................................................................................................................................................................181.000.00--------------------1.00-------------------------------------------------------------------------------
.......................TTCTGGCTGTTTGAAGAAAGGGAGGA........................................................................................................................................................................................................................................................................................................................2611.002.00---------------1.00------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................GAGTGTCTGGAGCCCGAATGCATG.......2411.001.00-1.00--------------------------------------------------------------------------------------------------
...TTGGGGCCATGACCCCTTTCTT................................................................................................................................................................................................................................................................................................................................................2211.001.00-1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................CATCATAGGACCTGGGGGC.........................................................................................1911.001.00-----------------------------------------------------------------------------------1.00----------------
.....................................................................................................................................................................................................................................AAGGCAGAAAGTGGGTGA..................................................................................................................181.000.00-----------------------------------------------1.00----------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................ACGAGCGAGTGTCTGGAGCCC................2111.001.00-------------------------------------------------------1.00--------------------------------------------
................................................................................................................................................................................................................................................................................................................................................CTGGAGCCCGAATGCATG.......1811.001.00-------------1.00--------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................TGGAGCCCGAATGCATGCTGCTT.2311.001.00---1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................ACGAGCGAGTGTCTGGAGCCCGAA.............2411.001.00-------------------------------------------------------------------------------------------1.00--------
..........................TGGCTGTTTGAAGAAA...............................................................................................................................................................................................................................................................................................................................1630.330.33---------------------------------------------------------------------------------------------------0.33
.......................................................................................................................................................................................................................................................................................................................................AGCGAGTGTCTGGAG...................1550.200.20--0.20-------------------------------------------------------------------------------------------------

Antisense strand
ACCTTGGGGCCATGACCCCTTTCTTCTGGCTGTTTGAAGAAAGGGAGAAGGTAAGAGTGGGAGGAAAGGATAGGAATAGGGAAGGAAGTGCAGGAAGTAGAGAAGGTATAAAGGAGACAGGAGATTAAAAGAAGAGAGAGAACATGGGAGAACATTTAGAGGGGGAAGGTATGTTTAACTTGGGTTATATTTGTAGAAACTATATCATGAGGGGTTGGTTGGGCACAAGAAGGCAGAAAGTGGGGGAGTAGGCCATCATAGGACCTGGGGGCCTGGGACTTTGACACTAATTCCCAGCACGTTCTATGAAGATGTTTGAGTTCTACGAGCGAGTGTCTGGAGCCCGAATGCATGCTGCTTA
...............................................................................................................................................................................................................................................(((.((((((.((...(((.((..(((((....))))).)).)))..)).))))))..))).............................................................
...............................................................................................................................................................................................................................................240....................................................................311................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189786SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR029128(GSM416757)
H520. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR343336SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040009(GSM532894)
G727T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR040039(GSM532924)
G531T. (cervix)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343337SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189783SRR189782SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................CCTATCCTTTCCTCCCACTCTTACCT............................................................................................................................................................................................................................................................................................... 2612.002.00------------------------2.00---------------------------------------------------------------------------
....................................................................................GAAGTGCAGGAAGTAGAG................................................................................................................................................................................................................................................................... 182.000.00----------------------------------------------------------1.00------------------------------------1.00----
.....................................................................................AAGTGCAGGAAGTAGTGTG................................................................................................................................................................................................................................................................. 191.000.00-----------------1.00----------------------------------------------------------------------------------
..........................................................................................CAGGAAGTAGAGAAGGTTACG.......................................................................................................................................................................................................................................................... 211.000.00----------------------------------1.00-----------------------------------------------------------------
...........................................................GGAGGAAAGGATAGGAATCT.......................................................................................................................................................................................................................................................................................... 201.000.00------------------------------------------------------------------------1.00---------------------------
..........................................................................AATAGGGAAGGAAGTTCT............................................................................................................................................................................................................................................................................. 181.000.00------------------------------------------------------------------------------------------------1.00---
............TGACCCCTTTCTTCTGAG........................................................................................................................................................................................................................................................................................................................................... 181.000.00-1.00--------------------------------------------------------------------------------------------------