ID: uc010oyy.1_intron_0_0_chr1_145575405_f.3p
GENE: PIAS3(1)
chr1:145577862-145578111+


(3)
B-CELL
(3)
BRAIN
(8)
BREAST
(7)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(7)
LIVER
(2)
OTHER
(1)
RRP40.ip
(2)
SKIN
(4)
UTERUS

Sense strand
ACCTGATGGTTGCTAAAGTGGGACTGAGATGTCCCTTTGGATAGGTCGACTACCTGGCAGTAATCCACTAGCTGCGAAGCATCATCTTTCCCATCAGTGCTGGAGAGAAAGGCACTGCCCACCTGGTAGCTCAGCCCATGTCTTGGCAGGGCAGGCCTGTGCAAGGGAGGATGCTCAAGCTTCTCTGTTTTTCTCCACAGCACATGGTGATGAGTTTCCGGGTGTCTGAGCTCCAGGTGCTTCTTGGCTT
..............................................................................................(((((((.........)))))))..(((..(((.((((.(((........))).))))..))).))).........................................................................................
..............................................................................................95...................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787SRR189782SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577740(Rovira)
total RNA. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR343334SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR040036(GSM532921)
G243N. (cervix)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
...................................................................................................CTGGAGAGAAAGGCAGTTC....................................................................................................................................1922.000.003.006.001.002.006.00---2.002.00-----------------------------------
....................................................................................................TGGAGAGAAAGGCACTTCCT..................................................................................................................................2020.000.001.001.00-1.005.00-1.00-----2.00---1.00----1.00-1.001.00-1.00-------1.001.00---1.001.00----
....................................................................................................TGGAGAGAAAGGCACTTCC...................................................................................................................................1920.000.008.00-10.00---1.00---1.00----------------------------------
...................................................................................................CTGGAGAGAAAGGCAGTT.....................................................................................................................................1815.000.001.001.00-5.00-----3.00--1.00-----1.001.00------------1.00--------1.00---
....................................................................................................TGGAGAGAAAGGCACCTGA...................................................................................................................................199.000.00-----4.001.001.00-------------------1.00--------1.00-1.00------
....................................................................................................TGGAGAGAAAGGCACTGCCTGA................................................................................................................................228.000.00-----5.001.00--------1.00-------------1.00---------------
....................................................................................................TGGAGAGAAAGGCACTGCCTG.................................................................................................................................217.000.00------3.001.00------1.00-------------1.00-1.00--------------
....................................................................................................TGGAGAGAAAGGCACTTC....................................................................................................................................184.000.00---2.00----1.00----------------------------------1.00-
...................................................................................................CTGGAGAGAAAGGCAGGTC....................................................................................................................................193.000.00-1.00------2.00------------------------------------
....................................................................................................TGGAGAGAAAGGCACTCCTG..................................................................................................................................203.000.00-------3.00-------------------------------------
...................................................................................................CTGGAGAGAAAGGCAGTTT....................................................................................................................................193.000.00-1.00-----------------------1.00------------------1.00
....................................TTGGATAGGTCGACTACCTGGCA...............................................................................................................................................................................................2313.003.00-----------3.00---------------------------------
....................................................................................................TGGAGAGAAAGGCACTTCGT..................................................................................................................................201.000.00--------------------1.00------------------------
....................................................................................................TGGAGAGAAAGGCACATCC...................................................................................................................................191.000.00--1.00------------------------------------------
....................................................................................................TGGAGAGAAAGGCACTCCT...................................................................................................................................191.000.00-------1.00-------------------------------------
...................................................................................................CTGGAGAGAAAGGCACTTCCT..................................................................................................................................211.000.00-1.00-------------------------------------------
....................................................................................................TGGAGAGAAAGGCACTGCCTGTT...............................................................................................................................231.000.00---------------1.00-----------------------------
....................................................................................................TGGAGAGAAAGGCACTTCCG..................................................................................................................................201.000.00-------------1.00-------------------------------
....................................................................................................TGGAGAGAAAGGCACACCC...................................................................................................................................191.000.00----------------1.00----------------------------
...................................................................................................CTGGAGAGAAAGGCAGATA....................................................................................................................................191.000.00---1.00-----------------------------------------
....................................................................................................TGGAGAGAAAGGCACTGCCCGA................................................................................................................................221.000.00-----1.00---------------------------------------
...................................................................................................CTGGAGAGAAAGGCAGTTG....................................................................................................................................191.000.00---1.00-----------------------------------------
....................................................................................................TGGAGAGAAAGGCACTT.....................................................................................................................................171.000.00-1.00-------------------------------------------
....................................................................................................TGGAGAGAAAGGCACTGCCCCA................................................................................................................................221.000.00----------1.00----------------------------------
....................................................................................................TGGAGAGAAAGGCACTTGA...................................................................................................................................191.000.00--------------1.00------------------------------
....................................................................................................TGGAGAGAAAGGCACTGCGTGA................................................................................................................................221.000.00-------------------------------------1.00-------
................................................................................................GTGCTGGAGAGAAAGGGTA.......................................................................................................................................191.000.00-------------------------------1.00-------------
....................................................................................................TGGAGAGAAAGGCACAACC...................................................................................................................................191.000.00-----1.00---------------------------------------
.............................................................................................................................................CTTGGCAGGGCAGGCAAAA..........................................................................................191.000.00-----------------1.00---------------------------
....................................................................................................TGGAGAGAAAGGCACCCTG...................................................................................................................................191.000.00-------1.00-------------------------------------
..........................................................................................................................................................................................................CATGGTGATGAGTTTCCGGGTGTCTGA.....................2711.001.00------------------------------------------1.00--
....................................................................................................TGGAGAGAAAGGCACCTC....................................................................................................................................181.000.00-------------1.00-------------------------------
....................................................................................................TGGAGAGAAAGGCACTGCCTGAA...............................................................................................................................231.000.00----------1.00----------------------------------
....................................................................................................TGGAGAGAAAGGCACTTTGT..................................................................................................................................201.000.00------1.00--------------------------------------
....................................................................................................TGGAGAGAAAGGCACTGCCGGA................................................................................................................................221.000.00---------------------------------1.00-----------
..............................................................................................................................................................GTGCAAGGGAGGATGCT...........................................................................1720.500.50----0.50----------------------------------------
....................................................................................................TGGAGAGAAAGGCACTG.....................................................................................................................................1720.500.50-------0.50-------------------------------------

Antisense strand
ACCTGATGGTTGCTAAAGTGGGACTGAGATGTCCCTTTGGATAGGTCGACTACCTGGCAGTAATCCACTAGCTGCGAAGCATCATCTTTCCCATCAGTGCTGGAGAGAAAGGCACTGCCCACCTGGTAGCTCAGCCCATGTCTTGGCAGGGCAGGCCTGTGCAAGGGAGGATGCTCAAGCTTCTCTGTTTTTCTCCACAGCACATGGTGATGAGTTTCCGGGTGTCTGAGCTCCAGGTGCTTCTTGGCTT
..............................................................................................(((((((.........)))))))..(((..(((.((((.(((........))).))))..))).))).........................................................................................
..............................................................................................95...................................................................164....................................................................................
SizePerfect hitTotal NormPerfect NormSRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189787SRR189782SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577740(Rovira)
total RNA. (breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
TAX577741(Rovira)
total RNA. (breast)
SRR343334SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
GSM532876(GSM532876)
G547T. (cervix)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR040036(GSM532921)
G243N. (cervix)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
.......................................................................................................GGGCAGTGCCTTTCTCT.................................................................................................................................. 1711.001.00----------------------1.00----------------------