ID: uc010oyo.1_intron_4_0_chr1_145337102_f.3p
GENE: (5)
chr1:145337611-145337860+


(10)
B-CELL 		(5)
BRAIN 		(12)
BREAST 		(20)
CELL-LINE 		(3)
CERVIX 		(1)
FIBROBLAST 		(4)
HEART 		(2)
HELA 		(11)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(17)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
GGGGATATTTCACCCTTGGTTCTGAGATGTAAACCAAAGAATATCATGACCAGCTTTCAGGCCTCCTGAAGTATATCTCTCACATTGTCCTGTTCTCATGCTGAGGAGCCTGAGATCCCTGTGTGGGGATTAGACAGTGGACTGTTATGGGTGTAGGTGAATTGGCTTATTTTGTCTGTCCCTGTCTGAATGTATTGCAGGAATTAAAAAGGACCAAGAAGAGGAAGAAGACCAAGGCCCACCATGCCCC
...................................................................................................................(((((....)))))((((((((.((((..........((((((......)))))).......)))))))))))).............................................................
...................................................................................................................116.................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343336SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577740(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM532888(GSM532888)
G761T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM532883(GSM532883)
G871N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR343337SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
............................................................................................................................GGGGATTAGACAGTGGACTGTTATGGGTGTAGGTGAATTGGCTTATTTTGTCTGTCCCTGTCTGAATGTATTGCAGTTT...............................................7915.000.00--15.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACCAAGAAGAGGAAGAAGACCAAGA.............256.000.00-3.00-----------------------------------------1.00--------------------1.001.00------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGATC........................205.000.00---5.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GAAGAGGAAGAAGACCTGCT.............205.000.00--------------4.00----------------------------------------------------------------------1.00----
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAAGAC............295.000.005.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAAGACCATC..............284.000.00---4.00--------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AATTAAAAAGGACCAAGAAGAGGAT........................254.000.00-4.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAT.....................244.000.00--------------------4.00---------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGT...................264.000.00-2.00--1.00-------------------------------------------------------1.00-----------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGT......................234.000.004.00-----------------------------------------------------------------------------------------
.........................................................................................................................TGTGGGGATTAGACAGTGGACTGTTATGGGTGTAGGTGAATTGGCTTATTTTGTCTGTCCCTGTCTGAATGTATTGCAGA.................................................803.000.00--------------------------3.00---------------------------------------------------------------
..........................................................................................................................................................................................................ATTAAAAAGGACCAAGAAGAGGATT.......................253.000.00----2.00---1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGATA.................243.000.001.00----1.001.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................AATTAAAAAGGACCAAGAAGAGGATT.......................263.000.00-3.00----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GAAGAGGAAGAAGACCAAGGTTT..........232.000.00--------------------------------------------2.00---------------------------------------------
.........................................................................................................................................TGGACTGTTATGGGTGTAGGTGAATTCTG....................................................................................292.000.00------------------2.00-----------------------------------------------------------------------
......................................................................................................................................CAGTGGACTGTTATGGGTGTAGGTGAATTCTG....................................................................................322.000.00---------------2.00--------------------------------------------------------------------------
........................................................................................................................GTGTGGGGATTAGACAGTGGAA............................................................................................................222.000.00-------2.00----------------------------------------------------------------------------------
..................................................................................................................................................................................TCCCTGTCTGAATGTATTGCAGA.................................................232.000.00----1.00-----------------------------1.00-------------------------------------------------------
...........................................................................................................................TGGGGATTAGACAGTGGACTGTTACGG....................................................................................................272.000.00------------------------------2.00-----------------------------------------------------------
..........................................................................................................................................................................................................ATTAAAAAGGACCAAGAAGAGGATTT......................262.000.00------------1.00-------------------------------------------------------1.00---------------------
..........................................................................................................................................................................................................ATTAAAAAGGACCAAGAAGAGATC........................242.000.00---2.00--------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGAAGAA..................262.000.00------2.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGATT.......................222.000.00-1.00-------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGAGGAAGAAGACCAAGGCCCCCCA......252.000.002.00-----------------------------------------------------------------------------------------
...............................................................................................................GAGATCCCTGTGTGGGGATTAGACAGTAGA.............................................................................................................302.000.00------------------1.00----------------1.00------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGATA.................282.000.00-----1.00-------------1.00----------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGTA.....................242.000.00-1.00-----------1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................ATTAAAAAGGACCAAGAAGAGGAAGAT.....................272.000.00--------1.00-------1.00-------------------------------------------------------------------------
..............................................................................................................................................TGTTATGGGTGTAGGTGAATTTGCT...................................................................................252.000.00------------------------1.00----------------1.00------------------------------------------------
......................................................................................................................................................................................................................CAAGAAGAGGAAGAAGACCAAGACC...........252.000.00-------2.00----------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAATA...................232.000.00-----1.001.00-----------------------------------------------------------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGAAGACCAAGACC...........332.000.00-----------1.00------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................................AGAAGAGGAAGAAGACCAAGGCA...........232.000.00---------1.00--1.00-----------------------------------------------------------------------------
....................................................................................................................................................................................................................ACCAAGAAGAGGAAGAAGTT..................202.000.00----2.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACCAAGAAGAGGAAGAAGT...................192.000.00--------1.00----------------------------------------------1.00----------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGACCAAGACC...........342.000.00---------------------1.00-------1.00------------------------------------------------------------
...........................................................................................................................................GACTGTTATGGGTGTAGGG............................................................................................192.000.00-------------1.00---------------------------1.00------------------------------------------------
.......................................................................................................................................AGTGGACTGTTATGGGTGTAGGTGT..........................................................................................252.000.00-------2.00----------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAAAA.............282.000.00----------------------------------------------------------------------1.00-----------1.00-------
.....................................................................................................................................................................................................................CCAAGAAGAGGAAGAAGACCAAGA.............242.000.00----------------------------1.00----------1.00--------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGACAT......................202.000.00-----------------------------------------------1.00---------------------1.00--------------------
.............................................................................................................................................................................................................................AGGAAGAAGACCAAGGCCGA.........202.000.002.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGACCAAGGTT...........341.000.00-------------------------------------------------------------------------------1.00----------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAAGGCCAAAA.......341.000.00---------------------------------------------1.00--------------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGAAGACA.................261.000.00---------------------------1.00--------------------------------------------------------------
.........................................................................................................................................................................................................AATTAAAAAGGACCAAGAAGAGGAAGAAGACA.................321.000.00------------------------------------1.00-----------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAATAA..................271.000.00-------------------------------------1.00----------------------------------------------------
...........................................................................................................................................................................TTGTCTGTCCCTGTCTGAATGTATTGCAAA.................................................301.000.00---------------------------1.00--------------------------------------------------------------
.................................................................................................ATGCTGAGGAGCCTGAGATCCCCG.................................................................................................................................241.000.00----------------------------------------1.00-------------------------------------------------
............................................................................................................................................................................................................TAAAAAGGACCAAGAAGAGGAAGAAGACCAAGAC............341.000.00------------------1.00-----------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGACCAAGGT............331.000.00----1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCAAGAAGAGGAAGAAGATC.................201.000.00-----------------------------------------------------------------------1.00------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGAAGACCAAGA.............311.000.00----------------------------------1.00-------------------------------------------------------
..........................................................................................................................................................................................................................AAGAGGAAGAAGACCAAGGCCCACCATGCAA.311.000.00--------1.00---------------------------------------------------------------------------------
........................................................................................................................................GTGGACTGTTATGGGTGTATG.............................................................................................211.000.00--------------------------------------------------------1.00---------------------------------
.............................................................................................................................................................................................................................AGGAAGAAGACCAAGGCCCACCC......231.000.001.00-----------------------------------------------------------------------------------------
..................................................................................................................................................ATGGGTGTAGGTGAATTGGTTTA.................................................................................231.000.00-------------1.00----------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAAGGCAC..........311.000.00-----------1.00------------------------------------------------------------------------------
..............................................................................................................................................................................TCTGTCCCTGTCTGAATGTATTGCAGGCTTC.............................................311.000.00------------------------------1.00-----------------------------------------------------------
.......................................................................................................................................AGTGGACTGTTATGGGTGTAGGGG...........................................................................................241.000.00-----1.00------------------------------------------------------------------------------------
...............................................................................................................................................GTTATGGGTGTAGGTGAATTGGGT...................................................................................241.000.00------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................................AATTAAAAAGGACCAAGAAGAGGATTT......................271.000.00--------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGATT....................221.000.001.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACAAAA..............271.000.00---------------------1.00--------------------------------------------------------------------
....................................................................................................................CCCTGTGTGGGGATTAGAGAGT................................................................................................................221.000.00------1.00-----------------------------------------------------------------------------------
...................................................................................................................................................TGGGTGTAGGTGAATTGGAAA..................................................................................211.000.00--------------------------------------1.00---------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGAAC.................241.000.001.00-----------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGAAGAGGAAGAAGACCAAGGCCA..........241.000.001.00-----------------------------------------------------------------------------------------
................................................................................CACATTGTCCTGTTCTCATA......................................................................................................................................................201.000.00----------------------------------------------1.00-------------------------------------------
........................................................................................................................................................................ATTTTGTCTGTCCCTGTCTGAATGTATTTCAG..................................................321.000.00---------------------------------------------------------------------------1.00--------------
............................................................................................................................................................................................................TAAAAAGGACCAAGAAGT............................181.000.00-------------------------1.00----------------------------------------------------------------
.......................................................................................................................................AGTGGACTGTTATGGGTGTAGGGGAA.........................................................................................261.000.00------1.00-----------------------------------------------------------------------------------
.......................................................................................................AGGAGCCTGAGATCCCTGTGTGGGGAC........................................................................................................................271.000.00-----------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................................................ACCAAGAAGAGGAAGAAGACCAAGACC...........271.000.00----------1.00-------------------------------------------------------------------------------
.........................................................................................................................................................................................................AATTAAAAAGGACCAAGAAGAGGAAGTT.....................281.000.00-------------------------------------1.00----------------------------------------------------
.....................................................................................................................................................................................CTGTCTGAATGTATTGCAA..................................................191.000.00-------------------------------1.00----------------------------------------------------------
...................................................................................................................................................TGGGTGTAGGTGAATTGGCATA.................................................................................221.000.00------------1.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAGGAA.....................221.000.00---------------------------------------------------1.00--------------------------------------
...................................................................................................................................................................................CCCTGTCTGAATGTATTGCAGA.................................................221.000.00-----------------------------------------------------------1.00------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGAAGACCAAGACCC..........341.000.00-----------------------------1.00------------------------------------------------------------
..........................................................................................................................................................................................................ATTAAAAAGGACCAAGAAGAGGAAGAAGACT.................311.000.00----1.00-------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGGAAGAAGACCAAGGGCCA.........201.000.001.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAC...............261.000.00-----------------------------------------------------1.00------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAT........................211.000.00-------------------------------------------------------------------1.00----------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAAGACCAAGT.............291.000.00-----------1.00------------------------------------------------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGAAGATA.................261.000.001.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGGAAGAAGACCAAGTCCT..........191.000.001.00-----------------------------------------------------------------------------------------
..................................................................................................................................TAGACAGTGGACTGTTATGGGGGTA...............................................................................................251.000.00----------------------------1.00-------------------------------------------------------------
.......................................................................................................................................................................TATTTTGTCTGTCCCTGTCGAA.............................................................221.000.00--------------------------------------------------------------------------------1.00---------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGAAAA................251.000.001.00-----------------------------------------------------------------------------------------
................................................................................................................................................TTATGGGTGTAGGTGAATTGAC....................................................................................221.000.00---------------------------------------1.00--------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAAGACA.................251.000.00----1.00-------------------------------------------------------------------------------------
............................................................................................................................GGGGATTAGACAGTGGACTGTTATGGGCGTA...............................................................................................311.000.00-----------------------1.00------------------------------------------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGT......................221.000.00------------1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGATT.......................181.000.00---------1.00--------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGTT..................271.000.00----1.00-------------------------------------------------------------------------------------
..............................................................................................................................GGATTAGACAGTGGACTGTTACGGG...................................................................................................251.000.00-----------1.00------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGAAGAA...............261.000.001.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGATC.................281.000.00------1.00-----------------------------------------------------------------------------------
.........................................................................................................................TGTGGGGATTAGACAGTGGACCG..........................................................................................................231.000.00-----------------1.00------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACATC...............261.000.00---1.00--------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAAGACC...........301.000.00----------1.00-------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGAA..................271.000.00----------------1.00-------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCAAGAAGAGGAAGAAGATG.................201.000.00----------------------------1.00-------------------------------------------------------------
...........................................................................................................................................GACTGTTATGGGTGTAGGTGAATTGGCTTCTT...............................................................................321.000.00-----------------------1.00------------------------------------------------------------------
..........................................................................................................................................................................................................ATTAAAAAGGACCAAGAAGAGGAAGAAGAT..................301.000.00----------------1.00-------------------------------------------------------------------------
...........................................................................................................................TGGGGATTAGACAGTGGACTGTTATT.....................................................................................................261.000.00------------------------------------------1.00-----------------------------------------------
...........................................................................................................................................................................................GAATGTATTGCAGGAATTAAAAAAA......................................251.000.00------------------------------------------------1.00-----------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGATA....................221.000.00-1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAA....................251.000.00----------------------1.00-------------------------------------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGAAGT...................241.000.00--------------------------------1.00---------------------------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGAAGACCG................271.000.00---------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................CCCTGTCTGAATGTATTGCAGAA................................................231.000.00-------------------------------------------------1.00----------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGATA....................231.000.00-------------------1.00----------------------------------------------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGAAGT...................251.000.00------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................TGGACTGTTATGGGTGGAGG.............................................................................................201.000.00-------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGAAGACCAAAAAA...........331.000.00---------------------1.00--------------------------------------------------------------------
............................................................................................................................................................................................................TAAAAAGGACCAAGAAGGGG..........................201.000.00-----1.00------------------------------------------------------------------------------------
............................................................................................................................................................................................................................GAGGAAGAAGACCAAGGCCA..........201.000.00-----1.00------------------------------------------------------------------------------------
.....................................................................................................TGAGGAGCCTGAGATCCGACG................................................................................................................................211.000.00---------------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................................................GGACCAAGAAGAGGAAGAAGACAA................241.000.001.00-----------------------------------------------------------------------------------------
............................................................................................................................GGGGATTAGACAGTGGACTGTTATGGGGGCA...............................................................................................311.000.00-----------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAAGA.............281.000.001.00-----------------------------------------------------------------------------------------
...................................................................................................................................AGACAGTGGACTGTTACGGG...................................................................................................201.000.00-----------------------------------1.00------------------------------------------------------
.............................................................................................................................................................................................................................AGGAAGAAGACCAAGGCGCG.........201.000.001.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAATT...................261.000.00-------------------1.00----------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACA.................241.000.001.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................TTAAAAAGGACCAAGAAGAGGAAGGG.....................261.000.001.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGAACA................251.000.001.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGAAGACCAATG.............301.000.00---------------1.00--------------------------------------------------------------------------
....................................................................................................................................GACAGTGGACTGTTATGGGTGTAGAAA...........................................................................................271.000.00--------------------------------------------------------------------------1.00---------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGAAGAA..................251.000.001.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAAAA...................231.000.00-1.00----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAA....................211.000.00--------------------------------------1.00---------------------------------------------------
..........................................................................................................................................................................................................ATTAAAAAGGACCAAGAAGAGGAT........................241.000.00---------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................................................................TTAAAAAGGACCAAGAAGAGGAAGAAGACCAAGA.............341.000.00-------------------------------------------------------------1.00----------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAAGACT.................251.000.00---------1.00--------------------------------------------------------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGATT.......................211.000.00-----1.00------------------------------------------------------------------------------------
........................................................................................................................................GTGGACTGTTATGGGTGC................................................................................................181.000.00-------------1.00----------------------------------------------------------------------------
...............................................................................................................................................GTTATGGGTGTAGGTGAATTGGA....................................................................................231.000.00-------1.00----------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGATT.......................191.000.00-------------------1.00----------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAAGAA............291.000.001.00-----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGAGGAAGAAGACCAAGGT............191.000.00----------------------1.00-------------------------------------------------------------------
....................................................................................................................................................................................................................ACCAAGAAGAGGAAGAACA...................191.000.00---------------------------------------------------------1.00--------------------------------
........................................................................................................................................GTGGACTGTTATGGGTGA................................................................................................181.000.00-----------------------------------------------------------------------------------1.00------
.............................................ATGACCAGCTTTCAGGCCCCTG.......................................................................................................................................................................................221.000.00-----------------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGAAGAAC.................261.000.00-----1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGACCAAGGCT...........341.000.00---------------------------1.00--------------------------------------------------------------
...........................................................................................................................................................................................................TTAAAAAGGACCAAGAAGAGGAAGAAGAG..................291.000.001.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AATTAAAAAGGACCAAGAAGAGGAAGT......................271.000.00--------------------------------1.00---------------------------------------------------------
....................................................................................................................................................................................................................ACCAAGAAGAGGAAGAAGACCAAGGT............261.000.00--------1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACAA................251.000.001.00-----------------------------------------------------------------------------------------
.............................................................................................................................GGGATTAGACAGTGGACTGTTATGGGTGTAGGAAAA.........................................................................................361.000.00----------------------------------------------------------------------------1.00-------------
....................................................................................................................................GACAGTGGACTGTTACGG....................................................................................................181.000.00------------------------------------------------------------------------------1.00-----------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGACCAAGA.............321.000.00--------------------------------------------------------------------------------------1.00---
...........................................................................................................................................................................................................TTAAAAAGGACCAAGAAAA............................191.000.00----------------------------------------------------------1.00-------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGAAGATCA................281.000.00-----1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGACCAAGAC............331.000.00--------1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGATT....................211.000.00---------1.00--------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGTTT....................251.000.00----1.00-------------------------------------------------------------------------------------
............CCCTTGGTTCTGAGAAA.............................................................................................................................................................................................................................171.000.00-------------------------------------------------------------------------1.00----------------
......................................................................................................................................................................................TGTCTGAATGTATTGTAG..................................................181.000.00--------------------------------------------------1.00---------------------------------------
.................................................................................................................................TTAGACAGTGGACTGTTACGGG...................................................................................................221.000.00----------1.00-------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAAGATCA................261.000.001.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................ATTAAAAAGGACCAAGAAGAGGAAGATTT...................291.000.00----------------1.00-------------------------------------------------------------------------
.........................................................................................................................................................................................................AATTAAAAAGGACCAAGAAGAGGAAGAT.....................281.000.00----------------------1.00-------------------------------------------------------------------
........................................................................................................................................................................................................................AGAAGAGGAAGAAGACCAAGGGC...........231.000.00-----1.00------------------------------------------------------------------------------------
...............................................................................................................................................................................CTGTCCCTGTCTGAATGTATTGA....................................................231.000.00---------------------------------------------------------------1.00--------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAAGACCAAGGCA...........341.000.00------------------------------------------------------1.00-----------------------------------
............................................................................................................................................................................................................TAAAAAGGACCAAGAAGAGGAAGAAGACCAAGA.............331.000.00-----------------------------1.00------------------------------------------------------------
......................................................................................................................................CAGTGGACTGTTATGGTG..................................................................................................181.000.00---------------1.00--------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGAGCA................251.000.001.00-----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AAGAGGAAGAAGACCAAGGCCCATA.......251.000.00-----1.00------------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAAC....................221.000.00--------------------------------------------------------------1.00---------------------------
............................................................................................................................................................................................................TAAAAAGGACCAAGAAGAGGAAGAAGT...................271.000.00----1.00-------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGAAGAGGAAGAAGACCAAGGCAA..........241.000.00-1.00----------------------------------------------------------------------------------------
...........................................................................................................................TGGGGATTAGACAGTGGACTGTC........................................................................................................231.000.00-----------------1.00------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGAAGAATA...................261.000.00-1.00----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGATC.................241.000.00------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................................................................................ACCAAGAAGAGGAAGAAGACCAAGGCCCACCATGT...351.000.00-----------------------------------------------------------------------------1.00------------
...........................................................................................................................TGGGGATTAGACAGTGGACTGCTA.......................................................................................................241.000.00----------------------------------------1.00-------------------------------------------------
...............................................................................................................................................................................CTGTCCCTGTCTGAAAAAA........................................................191.000.00------------------------------------------------------------------------1.00-----------------
.................................................................................................................................................................................................................AGGACCAAGAAGAGGAAGAAGACCAAGGT............291.000.00-----1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AAAAAGGACCAAGAAGAGGC.........................201.000.00----------------------------------------------------------------------------------------1.00-
.....................................................................................................................................ACAGTGGACTGTTATGGGTGTAGAA............................................................................................251.000.00-------------------------------1.00----------------------------------------------------------
.............................................................................................................................................................................................................................AGGAAGAAGACCAAGGCTCAC........211.000.00------------------------1.00-----------------------------------------------------------------
........................................................................................................................................................................................................GAATTAAAAAGGACCAAGAAA.............................211.000.00----------------------------------------------------1.00-------------------------------------
...............................................................................................................................................................................................................AAAGGACCAAGAAGAGGAAGAAGACCAAGA.............301.000.00----------1.00-------------------------------------------------------------------------------
.........................................................................................................................................TGGACTGTTATGGGTGTAGGC............................................................................................211.000.00-------------------------------------------1.00----------------------------------------------
...........................................................................................................................TGGGGATTAGACAGTGGACTGTTATGAAA..................................................................................................291.000.00-------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................................................................AAAAGGACCAAGAAGAGGAAGAAGACCAAGAC............321.000.00-----------1.00------------------------------------------------------------------------------
.......................................................................................................................................AGTGGACTGTTATGGGC..................................................................................................171.000.00---------------------------------------------------------------------------------1.00--------
..................................................................................................................................................................................................................GGACCAAGAAGAGGAAGAAGACCAAGAC............281.000.00------------------------------------------------------------------1.00-----------------------
................................................................................................................................................................................................................AAGGACCAAGAAGAGGAAGAAGACCAAAA.............291.000.00------------------------------------------1.00-----------------------------------------------
....................................................................................................................................................GGGTGTAGGTGAATTTTT....................................................................................181.000.00---------------------------------------------------------------------------------------1.00--
.............................................................................................................................................................................GTCTGTCCCTGTCTGAATGTATTTCAG..................................................271.000.00------------------------------------------------------------------------------------1.00-----
.............................................................................................................................................................................................................................AGGAAGAAGACCAAGGCCCACCATGTT..271.000.00----------1.00-------------------------------------------------------------------------------
....................TCTGAGATGTAAACCAAAGAATATCATGACC.......................................................................................................................................................................................................3160.170.17----------0.17-------------------------------------------------------------------------------
......................TGAGATGTAAACCAAAGAATATCATGACCAGC....................................................................................................................................................................................................3260.170.17----------0.17-------------------------------------------------------------------------------
..................GTTCTGAGATGTAAACCA......................................................................................................................................................................................................................1870.140.14-----------------------------------------------------------------------------------------0.14

Antisense strand
GGGGATATTTCACCCTTGGTTCTGAGATGTAAACCAAAGAATATCATGACCAGCTTTCAGGCCTCCTGAAGTATATCTCTCACATTGTCCTGTTCTCATGCTGAGGAGCCTGAGATCCCTGTGTGGGGATTAGACAGTGGACTGTTATGGGTGTAGGTGAATTGGCTTATTTTGTCTGTCCCTGTCTGAATGTATTGCAGGAATTAAAAAGGACCAAGAAGAGGAAGAAGACCAAGGCCCACCATGCCCC
...................................................................................................................(((((....)))))((((((((.((((..........((((((......)))))).......)))))))))))).............................................................
...................................................................................................................116.................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		TAX577739(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343336SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		TAX577740(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		TAX577746(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM532888(GSM532888)
G761T. (cervix)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM532883(GSM532883)
G871N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		GSM956925PazD5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR343337SRR553574(SRX182780)
source: Heart. (Heart)		TAX577743(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)