ID: uc010owr.1_intron_12_0_chr1_114968292_r.3p
GENE: (2)
chr1:114968242-114968491-


(1)
AGO3.ip 		(1)
B-CELL 		(4)
BRAIN 		(3)
BREAST 		(7)
CELL-LINE 		(1)
CERVIX 		(1)
HELA 		(2)
LIVER 		(1)
OTHER 		(7)
SKIN

Sense strand
CTTTAAACTGACTCCATTCCCTGCTGTACTGTTGGAGCTTTGAGGTGCTGATAGTTGTCAGAGGAAAGAGGAAAACATGGTGATTACTCAACAAAGTAGATGATTTAGTTGATTATATGCAAATTCTCATTTTTTAAATTTTTCAGGTAATCTAGTAATAGAGAGTAAACCAGCTCCTGGTTATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGGACAAACCACATTAGTAAAACCCCTGGACAG
......................................................................................(((((((..(((.((((((.....)))))).)))......................................(((.(((((((((((...)))))).)))))))).))))).))..................................................
..................................................................................83...................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR189785SRR029130(GSM416759)
DLD2. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189782SRR343334DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
.......................................................................................TCAACAAAGTAGATGGTG.................................................................................................................................................181892.000.001451.00227.00202.0012.00---------------------------
.......................................................................................TCAACAAAGTAGATGGTGT................................................................................................................................................1981.000.0061.0012.005.003.00---------------------------
.......................................................................................TCAACAAAGTAGATGGTGA................................................................................................................................................1918.000.0016.002.00-----------------------------
.......................................................................................TCAACAAAGTAGATGGTA.................................................................................................................................................1814.000.007.001.004.002.00---------------------------
.......................................................................................TCAACAAAGTAGATGGGG.................................................................................................................................................187.000.004.003.00-----------------------------
........................................................................................................................................................................ACCAGCTCCTGGTTATACTCCTAA..........................................................2416.006.00----6.00--------------------------
.............................................................................................................................................................................................................................CAAACCACATTAGTAAAACATA.......224.000.00------1.00-3.00----------------------
....................................................AGTTGTCAGAGGAAACTGC...................................................................................................................................................................................192.000.00-----------1.00-------1.00-----------
.......................................................................................TCAACAAAGTAGATGGTAT................................................................................................................................................192.000.001.00--1.00---------------------------
.......................................................................................TCAACAAAGTAGATGATG.................................................................................................................................................182.000.00--2.00----------------------------
...............................TTGGAGCTTTGAGGTGCTGATAGTTGTCAG.............................................................................................................................................................................................3012.002.00-----2.00-------------------------
..................................................................................................................ATATGCAAATTCTCATTTTTTAA.................................................................................................................2311.001.00-------------1.00-----------------
.........................................GAGGTGCTGATAGTTGA................................................................................................................................................................................................171.000.00----------------1.00--------------
................................................................................................................................................................................................TGTTGTAGTTGGGCAAGTTCCTCC..................................2411.001.00-----------------------1.00-------
.......................................................................................TCAACAAAGTAGATGGCG.................................................................................................................................................181.000.00-1.00-----------------------------
.................TCCCTGCTGTACTGTTGGAGCTTTGAGGT............................................................................................................................................................................................................2911.001.00---------------1.00---------------
.......................................................................................................................................................................................................GTTGGGCAAGTTCCTCCAGGG..............................2111.001.00------------------1.00------------
............................................................................................................................................................................................CTAATGTTGTAGTTGGGCAA..........................................2011.001.001.00------------------------------
................TTCCCTGCTGTACTGTTGA.......................................................................................................................................................................................................................191.000.00--------------------1.00----------
..............CATTCCCTGCTGTACTGTTGGAGCTTTG................................................................................................................................................................................................................2811.001.00---------------------1.00---------
.........................GTACTGTTGGAGCTTTGAGGTGC..........................................................................................................................................................................................................2311.001.00------------1.00------------------
................TTCCCTGCTGTACTGTTGGAGC....................................................................................................................................................................................................................2211.001.00-----1.00-------------------------
...................................................................................................................TATGCAAATTCTCATTTTTT...................................................................................................................2011.001.00----------------------1.00--------
...............................................CTGATAGTTGTCAGAGGAAAGAGGAAAAC..............................................................................................................................................................................2911.001.00-----1.00-------------------------
.................................................................................GATTACTCAACAAAGTAGATGATTTAGTTG...........................................................................................................................................3011.001.00-----------------1.00-------------
............................................................................................AAAGTAGATGATTTATATT...........................................................................................................................................191.000.00-------1.00-----------------------
......................................................................................CTCAACAAAGTAGATGGTG.................................................................................................................................................191.000.001.00------------------------------
....................................................................AGGAAAACATGGTGATTACTCAA...............................................................................................................................................................2311.001.00------------------------1.00------
..............................................................................................................................................................................................AATGTTGTAGTTGGGCAAGTT.......................................2111.001.00----------------------------1.00--
................................................................................................................................................................................................TGTTGTAGTTGGGCAAGTTCCTCCAGGGAC............................3011.001.00-----1.00-------------------------
....................CTGCTGTACTGTTGGAGCTTTGAGGTGCTCTG......................................................................................................................................................................................................321.000.00--------------1.00----------------
.......................................................................AAAACATGGTGATTATTG.................................................................................................................................................................181.000.00---------1.00---------------------
..................................................................................................................................................................................................TTGTAGTTGGGCAAGTTC......................................1811.001.00-------------------------1.00-----
.......................................................................................TCAACAAAGTAGATGATGTAT..............................................................................................................................................211.000.00---1.00---------------------------
...............................................................................................................................................................................................ATGTTGTAGTTGGGCAAG.........................................1811.001.00---------1.00---------------------
.......................................................................................TCAACAAAGTAGATGGTTT................................................................................................................................................191.000.001.00------------------------------
................................................................................................................................................................................................TGTTGTAGTTGGGCAAGTT.......................................1911.001.00---------------------------1.00---
.......................................................................................TCAACAAAGTAGATGGAG.................................................................................................................................................181.000.001.00------------------------------
.......................................................................................TCAACAAAGTAGATGTGTA................................................................................................................................................191.000.001.00------------------------------
............................................................................................................................................................................................CTAATGTTGTAGTTGGGCAAGTTC......................................2411.001.00--------------------------1.00----
................................TGGAGCTTTGAGGTGC..........................................................................................................................................................................................................1620.500.50-----------------------------0.50-
.................................................GATAGTTGTCAGAGGA.........................................................................................................................................................................................1640.250.25------------------------------0.25

Antisense strand
CTTTAAACTGACTCCATTCCCTGCTGTACTGTTGGAGCTTTGAGGTGCTGATAGTTGTCAGAGGAAAGAGGAAAACATGGTGATTACTCAACAAAGTAGATGATTTAGTTGATTATATGCAAATTCTCATTTTTTAAATTTTTCAGGTAATCTAGTAATAGAGAGTAAACCAGCTCCTGGTTATACTCCTAATGTTGTAGTTGGGCAAGTTCCTCCAGGGACAAACCACATTAGTAAAACCCCTGGACAG
......................................................................................(((((((..(((.((((((.....)))))).)))......................................(((.(((((((((((...)))))).)))))))).))))).))..................................................
..................................................................................83...................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR189785SRR029130(GSM416759)
DLD2. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189782SRR343334DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040012(GSM532897)
G648N. (cervix)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................................................................................GACAAACCACATTAGTCA............. 185.000.00--2.00---3.00------------------------
......................................TTTGAGGTGCTGATACTCG................................................................................................................................................................................................. 191.000.00----------1.00--------------------
................................................................................................................................................AGGTAATCTAGTAATTT......................................................................................... 171.000.00-------1.00-----------------------
........................................................................................................................................................................................................................AGGGACAAACCACATATA................ 181.000.00----------1.00--------------------
................................................................................................................................................AGGTAATCTAGTAATAGAT....................................................................................... 191.000.00-------1.00-----------------------
.............................................................................................................................................................................................TAATGTTGTAGTTGGATA........................................... 181.000.00---------1.00---------------------