ID: uc010our.1_intron_2_0_chr1_104258641_f.3p
GENE: AMY2A(3)
chr1:104260413-104260662+


(1)
AGO2.ip
(1)
BRAIN
(3)
BREAST
(6)
CELL-LINE
(1)
LIVER
(2)
OTHER
(1)
TESTES

Sense strand
ATATGCCAGAAGAAAACCAGAGGATAGAGAGATGATAAAGACCCAGTAAAGGGCTATAAACATTAATGAAGGCATTGGATTCTAGATAAAGTCACTGAATGCAGAGACACAAGTAACAGGATTGGTTGGGTTTGGTGTAAAGGAGAAGGAAGAGGTAAATACATGCATAGTAAAATTTGGCTTTTTCCCCCCTACTTAAGGATGTTAATGATTGGGTTGGGCCACCAAATAATAATGGAGTAATTAAAGA
..................................................................................................(((((.((((.(((.(((.....))).))).)))).((((....................)))).)))))..................................................................................
.................................................................................................98....................................................................168................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR029128(GSM416757)
H520. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
SRR037936(GSM510474)
293cand1. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR029130(GSM416759)
DLD2. (cell line)
......................................................................................................AGAGACACAAGTAACTCA..................................................................................................................................1832.000.0021.00-4.003.00-3.00----1.00-----
.....................................................................................................CAGAGACACAAGTAACTCA..................................................................................................................................198.000.005.00-1.001.00-1.00----------
......................................................................................................AGAGACACAAGTAACTC...................................................................................................................................175.000.00-5.00--------------
.................................................................................................................................................AAGGAAGAGGTAAATCTTG......................................................................................191.000.00-------1.00--------
............................................................................................................................................AGGAGAAGGAAGAGGTGAAG..........................................................................................201.000.00-----------1.00----
...............................................................................................................................................................................TTTGGCTTTTTCCCCCCTTTT......................................................211.000.00---------1.00------
......................................................................................................AGAGACACAAGTAACACA..................................................................................................................................181.000.00-1.00--------------
............................................................................................................................................AGGAGAAGGAAGAGGTATGTG.........................................................................................211.000.00--------1.00-------
...................................................................................................TGCAGAGACACAAGTAACTCAA.................................................................................................................................221.000.00-1.00--------------
...................................................................................................TGCAGAGACACAAGTAACTCA..................................................................................................................................211.000.00--1.00-------------
......................................................................................................AGAGACACAAGTAACTCAA.................................................................................................................................191.000.00---1.00------------
....................................................................................................GCAGAGACACAAGTAACTCA..................................................................................................................................201.000.00---1.00------------
..............................................................................................................................................................................................................AATGATTGGGTTGGGCAGCT........................201.000.00------1.00---------
..............................................TAAAGGGCTATAAACATTAATGAAGGC.................................................................................................................................................................................2720.500.50------------0.50---
......................................................................................................................................................................................................................................AATAATGGAGTAATTAAA..1840.250.25-------------0.25--
..................................................................................TAGATAAAGTCACTGAATGCAGAGA...............................................................................................................................................2550.200.20------------0.20---
.........................................................................................................................................................................................................ATGTTAATGATTGGGTTGGGC............................2160.170.17--------------0.17-

Antisense strand
ATATGCCAGAAGAAAACCAGAGGATAGAGAGATGATAAAGACCCAGTAAAGGGCTATAAACATTAATGAAGGCATTGGATTCTAGATAAAGTCACTGAATGCAGAGACACAAGTAACAGGATTGGTTGGGTTTGGTGTAAAGGAGAAGGAAGAGGTAAATACATGCATAGTAAAATTTGGCTTTTTCCCCCCTACTTAAGGATGTTAATGATTGGGTTGGGCCACCAAATAATAATGGAGTAATTAAAGA
..................................................................................................(((((.((((.(((.(((.....))).))).)))).((((....................)))).)))))..................................................................................
.................................................................................................98....................................................................168................................................................................
SizePerfect hitTotal NormPerfect NormSRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189782SRR029128(GSM416757)
H520. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR553576(SRX182782)
source: Testis. (testes)
SRR037936(GSM510474)
293cand1. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR029130(GSM416759)
DLD2. (cell line)
...................................................................................................TGCAGAGACACAAGTAACATC.................................................................................................................................. 214.000.00----4.00-----------
....................................................................................................GCAGAGACACAAGTAACG.................................................................................................................................... 181.000.001.00---------------
...................................................................................................GTTACTTGTGTCTCTGCA..................................................................................................................................... 1860.670.670.50--------------0.17