ID: uc010otv.1_intron_5_0_chr1_95369081_r.5p
GENE: (1)
chr1:95390989-95391238-


(1)
AGO2.ip
(2)
BRAIN
(5)
BREAST
(10)
CELL-LINE
(3)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(3)
LIVER
(2)
OTHER
(46)
SKIN

Sense strand
ACATCCCGGGGCTGCGGGGGTAGGCGGTGTGAAGCGAATTATGTAAAGAGGTAATGAAGCGCACCGTTGTCAAACCCCAAGGGAGAGTTGTGGCTCTTGTCTCCCGCTGTTAGTCTGCACATCATACTGTCTTTGAAGCAAGGAGTTGATTTTAGTCTATGTATCTAAAGTTGAAATGTTTAGGTCCTTTACCTTTTCAAACGTGTTGCCCGTATTAGACAACAGTTTGCTAACAATTTTTTTAGAGAGC
.................................................................................................................((((.((((.......((((((...)))))).((((((((((.........)))))))))).)))).))))..................................................................
.................................................................................................................114..............................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR040028(GSM532913)
G026N. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................................TGAAATGTTTAGGTCCACTA...........................................................20222.500.50-3.504.000.501.000.50--1.00-1.001.501.00--0.50--0.500.500.50-1.00-------1.00---------------0.50--0.50-0.50---0.500.500.500.500.500.50------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCACT............................................................19213.500.50-1.500.500.500.501.00--0.500.500.50-0.501.500.50---0.50--1.00-----------------------0.50-0.500.50-0.50--0.500.50------0.500.50----------
...........................................................................................................................................................................TGAAATGTTTAGGTCCTCTAG..........................................................217.000.006.00--------1.00---------------------------------------------------------------
.........................................................................................................................................................................GTTGAAATGTTTAGGAC................................................................176.000.00----1.00------------1.00--------1.00-1.001.00-------1.00-----------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTC................................................................1575.575.57-0.71--0.290.14--------0.860.43-0.140.140.570.57------------------------0.290.140.14------------------0.290.140.140.140.140.140.14
...........................................................................................................................................................................TGAAATGTTTAGGTCCTCTTG..........................................................212.000.001.00--------------------------------1.00---------------------------------------
.....................................................................................................................CACATCATACTGTCTTTGAAGCAAGGAG.........................................................................................................2811.001.00--------------------------------------1.00----------------------------------
..........................................................................................................................................................................TTGAAATGTTTAGGTCCTCT............................................................201.000.00-------------------------------1.00-----------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCAC.............................................................1821.000.50---0.50-0.50-------------------------------------------------------------------
......................................................................................................................ACATCATACTGTCTTGTT..................................................................................................................181.000.00----------------1.00--------------------------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCTAT............................................................191.000.00---------------------------1.00---------------------------------------------
........................................................AAGCGCACCGTTGTCAAACCC.............................................................................................................................................................................2111.001.00----------------------------------------1.00--------------------------------
................................................................CGTTGTCAAACCCCAAGGGAGAGTTGTGGCT...........................................................................................................................................................3111.001.00--------------------------------1.00----------------------------------------
..........................................................................................TGGCTCTTGTCTCCCGCTGTTAGT........................................................................................................................................2411.001.00------------------------------------------1.00------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCAA.............................................................1821.000.50---0.50---------------------0.50-----------------------------------------------
...................................................................................................................................TTTGAAGCAAGGAGTTGA.....................................................................................................1811.001.00------1.00------------------------------------------------------------------
......................GGCGGTGTGAAGCGAATTATGTAAAGAG........................................................................................................................................................................................................2811.001.00-------------------------------------------1.00-----------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCTCTCG..........................................................211.000.001.00------------------------------------------------------------------------
..........................................................................................TGGCTCTTGTCTCCCGCTGTTAGTCCGCA...................................................................................................................................291.000.00------------------------------------1.00------------------------------------
............TGCGGGGGTAGGCGGTGT............................................................................................................................................................................................................................1811.001.00-----------------------1.00-------------------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCTTTTGT.........................................................221.000.001.00------------------------------------------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCAATA...........................................................2020.500.50----------------------------------------------------0.50--------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCC...............................................................1620.500.50-0.50-----------------------------------------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCATTT...........................................................2020.500.50---0.50---------------------------------------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCATTA...........................................................2020.500.50-------------------------0.50-----------------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCCCCT............................................................1920.500.50---------------------------------------------------------------0.50---------
...........................................................................................................................................................................TGAAATGTTTAGGTCCAAA............................................................1920.500.50---0.50---------------------------------------------------------------------
............TGCGGGGGTAGGCGG...............................................................................................................................................................................................................................1530.330.33-----------------------------------------------------------------0.33-------
............TGCGGGGGTAGGCGGGCGG...........................................................................................................................................................................................................................1930.330.33----------------------------------------------------------------0.33--------
..........................................................................................................................................................................TTGAAATGTTTAGGTC................................................................1640.250.25---------------0.25---------------------------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCAAGT............................................................1970.145.57---0.14---------------------------------------------------------------------
...........................................................................................................................................................................TGAAATGTTTAGGTCAACT............................................................1970.145.570.14------------------------------------------------------------------------

Antisense strand
ACATCCCGGGGCTGCGGGGGTAGGCGGTGTGAAGCGAATTATGTAAAGAGGTAATGAAGCGCACCGTTGTCAAACCCCAAGGGAGAGTTGTGGCTCTTGTCTCCCGCTGTTAGTCTGCACATCATACTGTCTTTGAAGCAAGGAGTTGATTTTAGTCTATGTATCTAAAGTTGAAATGTTTAGGTCCTTTACCTTTTCAAACGTGTTGCCCGTATTAGACAACAGTTTGCTAACAATTTTTTTAGAGAGC
.................................................................................................................((((.((((.......((((((...)))))).((((((((((.........)))))))))).)))).))))..................................................................
.................................................................................................................114..............................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR040028(GSM532913)
G026N. (cervix)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577739(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040019(GSM532904)
G701T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR040027(GSM532912)
G220T. (cervix)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.........................................TGTAAAGAGGTAATGGTGA.............................................................................................................................................................................................. 192.000.00-------2.00-----------------------------------------------------------------
.......................................................................................................................................................................................GTCCTTTACCTTTTCGTTC................................................ 191.000.00--------------------------------------------1.00----------------------------
.............GCGGGGGTAGGCGGTGGTGG......................................................................................................................................................................................................................... 201.000.00----------------------------------1.00--------------------------------------
......................................................................................................................................................................................GGTCCTTTACCTTTTCAAAGAG.............................................. 221.000.00-----------------------------------1.00-------------------------------------
.............GCGGGGGTAGGCGGTGGG........................................................................................................................................................................................................................... 181.000.00---------------------------------------1.00---------------------------------
...........................................................................................................................................................................................................TGTTGCCCGTATTAGAA.............................. 171.000.00------------------------1.00------------------------------------------------
.......................................................................................................................CATCATACTGTCTTTATTA................................................................................................................ 191.000.00-----------------------------------------1.00-------------------------------
.........................................TGTAAAGAGGTAATGGT................................................................................................................................................................................................ 171.000.00------1.00------------------------------------------------------------------
...........................................................................................................................................CTAAAATCAACTCCTT............................................................................................... 1660.170.17----------------0.17--------------------------------------------------------