ID: uc010osi.1_intron_1_0_chr1_87333786_r.3p
GENE: (4)
chr1:87333736-87333985-


(1)
AGO2.ip 		(1)
AGO3.ip 		(3)
B-CELL 		(2)
BRAIN 		(7)
BREAST 		(22)
CELL-LINE 		(1)
CERVIX 		(8)
HEART 		(3)
HELA 		(6)
LIVER 		(2)
OTHER 		(14)
SKIN 		(1)
XRN.ip

Sense strand
TAATTTGAAACAATTAGTGTCTTAAAATATTGGAGAATATGGTATGTCTCTCCATTTATCCACAGATGTTTAAATTTTCTTAGTTTTTTCATATAGGATATAATGTTTGATTTGTTGTTTATTTCCACTTTTATATTAATCTTTTTAGCTAGCTTGGATTTGGAAGTGAACTACTGAATCTTTTTTTCTTTTTTTATAAGCTTTTGTTAGGAGTGATAAACCCAAACTGTTCAGAGGACTGCAAATCAAG
............................................................................................................(((((((.(((((((((((..((((..(((..((....)).)))..))))..))))))))))).)).)))))......................................................................
........................................................................................................105............................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		GSM532886(GSM532886)
G850T. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTTGGT...................................................2311.000.0011.00---------------------------------------------------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACTGCAAATCA..2619.009.00-3.004.00---------2.00---------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTGGT....................................................228.000.007.00---1.00-----------------------------------------------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACTGCA.......2116.006.00-1.002.00------1.001.00-----1.00-----------------------------------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACTGCAAATC...2515.005.00-3.00------1.00------1.00------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTGGTT....................................................225.000.005.00---------------------------------------------------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACT..........1815.005.00--------------4.00-------------------------------------------1.00-----------
................................................................................................................................................................................................................................AACTGTTCAGAGGACTGCAAATC...2315.005.00--3.00----------------------2.00--------------------------------------------
...........................................................................................................................................................................................................................ACCCAAACTGTTCAGAGGACTGCAA......2515.005.00-1.004.00-------------------------------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTGCA.......2014.004.00-1.00---1.00----1.00-----1.00-----------------------------------------------------
.............................................................................................................ATTTGTTGTTTATTTCCAC..........................................................................................................................1914.004.00---4.00------------------------------------------------------------------
..................................................................................................................................................................................................................................CTGTTCAGAGGACTGCAAA.....1914.004.00------2.00---------------2.00-----------------------------------------------
.............................................................................................................................................................................................................................CCAAACTGTTCAGAGGACT..........1913.003.00-------------------3.00--------------------------------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACTGCAA......2213.003.00-1.00------1.00----------------------------------------1.00--------------------
.................................................................................................................................................................................................................................ACTGTTCAGAGGACTGCAAA.....2013.003.00------1.00----------------------1.00-----1.00----------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTG.........1813.003.00------1.00----1.00---------------------------------------------1.00------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTGCAAATCA..2513.003.00-----1.001.00--------1.00------------------------------------------------------
...........................................................................................................................................................................................................................ACCCAAACTGTTCAGAGGAC...........2013.003.00-----------------3.00----------------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTGCAAA.....2213.003.00------1.00----2.00----------------------------------------------------------
.........................................................................................................................................................................................................................................GAGGACTGCAAATCAAGTA193.000.00------1.00---1.00-------------1.00---------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACT..........1712.002.00-1.00------------------------------------------------1.00-------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACTGC........2012.002.00------1.00--------------------1.00------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTTGGC...................................................232.000.002.00---------------------------------------------------------------------
................................................................................................................................................................................................................................AACTGTTCAGAGGACTGCAA......2012.002.00-1.001.00-------------------------------------------------------------------
........................................................................................................................................TAATCTTTTTAGCTAGCTTGGATTCGG.......................................................................................272.000.002.00---------------------------------------------------------------------
........................................................................................................................................................................AACTACTGAATCTTTTTTTCTTTTT.........................................................2512.002.00---2.00------------------------------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTGC........1912.002.00--------1.00-1.00-----------------------------------------------------------
......................................................................................................ATGTTTGATTTGTTGTTTATTTCCA...........................................................................................................................2512.002.00----2.00-----------------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTGGTT...................................................232.000.002.00---------------------------------------------------------------------
...............................................................................................................................................................................................................TAGGAGTGATAAACCCAAACTGTTCAGAGGACT..........3312.002.00------------------2.00---------------------------------------------------
....................................................................................................TAATGTTTGATTTGTTGTTTATTTCCACT.........................................................................................................................2912.002.00----2.00-----------------------------------------------------------------
.......................................................................................................................................................................................................................................CAGAGGACTGCAAATCAAGTA212.000.00--2.00-------------------------------------------------------------------
....................................................................................................TAATGTTTGATTTGTTGTTTATTTCCA...........................................................................................................................2712.002.002.00---------------------------------------------------------------------
.........................................................................................................TTTGATTTGTTGTTTATTTCCAC..........................................................................................................................2312.002.00---2.00------------------------------------------------------------------
.................................................................................................................................................................................................................................ACTGTTCAGAGGACTGCA.......1812.002.00---------------------2.00------------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTGCAA......2112.002.00-1.00----1.00---------------------------------------------------------------
..........................................................................................................................................................................................................................AACCCAAACTGTTCAGAGG.............1912.002.00-----2.00----------------------------------------------------------------
........................................................................................................................................................................................................................TAAACCCAAACTGTTCAGAGGACTGCAAA.....2911.001.00------------------------------------1.00---------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTTCG....................................................221.000.00-------1.00--------------------------------------------------------------
.................................................................................................................................................................................................................................ACTGTTCAGAGGACTGCAAATC...2211.001.00---------------1.00------------------------------------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACTGCAAAT....2411.001.00-----------1.00----------------------------------------------------------
...................................................................................................................................................................................................................AGTGATAAACCCAAACTGTTCAGAGGACTGCA.......3211.001.00------------1.00---------------------------------------------------------
..............................................................................................................................................................................TGAATCTTTTTTTCTTTTTTTTTTG...................................................251.000.00---1.00------------------------------------------------------------------
.........................................................................................................................................................TTGGATTTGGAAGTGAACTACTGA.........................................................................2411.001.00----------------------------------------------------------------1.00-----
..................................................................................................................................................................................TCTTTTTTTCTTTTTTTATATG..................................................221.000.00-------------1.00--------------------------------------------------------
......................................................................................................................................................................................................................GATAAACCCAAACTGTTCAGAGGAC...........2511.001.00--------------------------1.00-------------------------------------------
.......................................................................................................................................................................................................................ATAAACCCAAACTGTTCAGAGGAC...........2411.001.00--------------------------------------------------------1.00-------------
................................................................................................................................................................................................................................AACTGTTCAGAGGACTGCAAATCAA.2511.001.00-----------------------1.00----------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTGCAAATCAAGTA2911.001.00-1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................................ACTGTTCAGAGGACTGCAAATCAAGTATG291.000.00-------------------------------------1.00--------------------------------
................................................................................................................................................................................................................................AACTGTTCAGAGGACTGCAAA.....2111.001.00----------1.00-----------------------------------------------------------
..................................................................................................................................................................................................................................CTGTTCAGAGGACTGCAAATCAAGTAT271.000.00--------------------------------------------------------------1.00-------
...............AGTGTCTTAAAATATTGGAGAATATGGA...............................................................................................................................................................................................................281.000.00--------------------------------1.00-------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTCCC.......................................................191.000.00---------------------------------1.00------------------------------------
................................................................................................................................................................................................................................AACTGTTCAGAGGACTGCA.......1911.001.00-1.00--------------------------------------------------------------------
......................................................................................................ATGTTTGATTTGTTGTTTATTTCCACTTCTA.....................................................................................................................311.000.001.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................................TTCAGAGGACTGCAAATCAA.2011.001.00------------------------1.00---------------------------------------------
.........................................................................................................................................................................................................................AAACCCAAACTGTTCAGAGGA............2111.001.00-----1.00----------------------------------------------------------------
........................................................................................................................................................................................................................................AGAGGACTGCAAATCAAGT191.000.00--------------------1.00-------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTCG.......................................................191.000.00-------1.00--------------------------------------------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACTGAAC......221.000.00-----1.00----------------------------------------------------------------
.........................................................................................................................................................................................................................AAACCCAAACTGTTCAGAGGACTG.........2411.001.00---------------------------------------------1.00------------------------
............................ATTGGAGAATATGGTATGT...........................................................................................................................................................................................................1911.001.00------------------------------------------------1.00---------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTGGGT....................................................221.000.001.00---------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCCAAACTGTTCAGAGGACTG.........2311.001.00-----1.00----------------------------------------------------------------
...................................................................................................................................................................................................................................TGTTCAGAGGACTGCAAGGAC..211.000.00------------------------------------------------------------1.00---------
....................................................................................................................................................................................................................................GTTCAGAGGACTGCAAATC...1911.001.00------------1.00---------------------------------------------------------
.........................................................................................................................................................................................................................AAACCCAAACTGTTCAGAGGACTGCAAATC...3011.001.00----------------1.00-----------------------------------------------------
...............................................................................................................................................................................................................TAGGAGTGATAAACCCAAACTGTTCAGAGGAC...........3211.001.00------------------1.00---------------------------------------------------
..................................................................................................................................................................................................................................CTGTTCAGAGGACTGCAAATT...211.000.00------------------------------------------------------1.00---------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTGGTC...................................................231.000.001.00---------------------------------------------------------------------
.................................................................................................................................................................................ATCTTTTTTTCTTTTTTTCCAG...................................................221.000.00-------------1.00--------------------------------------------------------
........................................................................................................................................................CTTGGATTTGGAAGTAT.................................................................................171.000.00--------------------------------------1.00-------------------------------
.............................................................................................................................................................................................................GTTAGGAGTGATAAACCCAAACTGTTCAGAGGA............3311.001.00------------------------------1.00---------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTGGCT...................................................231.000.001.00---------------------------------------------------------------------
......................................................................................................................TTATTTCCACTTTTATATTAATCTTTCTAG......................................................................................................301.000.00-------------1.00--------------------------------------------------------
................................................................................................................................................................................................................................AACTGTTCAGAGGACTGCAAATCAAG2611.001.00---------------------------1.00------------------------------------------
....................................................................................................................................................................................TTTTTTTCTTTTTTTATACCAG................................................221.000.00----------------------------1.00-----------------------------------------
.................................................................................................................................................................................ATCTTTTTTTCTTTTTTTCTCT...................................................221.000.001.00---------------------------------------------------------------------
..........................................................................................................................................................TGGATTTGGAAGTGAACTACTGAAT.......................................................................2511.001.00--------1.00-------------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTCGGT......................................................201.000.001.00---------------------------------------------------------------------
.................................................................................................................................................................................ATCTTTTTTTCTTTTTTTATTTCG.................................................241.000.00----------------------------1.00-----------------------------------------
.........................................................................................................................................AATCTTTTTAGCTAGATTG..............................................................................................191.000.00----------------------------------------------1.00-----------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTAATTT..................................................241.000.001.00---------------------------------------------------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGACTGCAAATCAA.2711.001.00-1.00--------------------------------------------------------------------
.........................................................................................................................................................................ACTACTGAATCTTTTTTTCTTTTT.........................................................2411.001.00---1.00------------------------------------------------------------------
......................................................................................................................................................................................................................................TCAGAGGACTGCAAATCCTT201.000.00-------------------------------------------------------1.00--------------
.......................................................................................................................................................GCTTGGATTTGGAAGTGAACTA.............................................................................2211.001.00-----1.00----------------------------------------------------------------
......................................................................................................................TTATTTCCACTTTTATATTAATCTTTCTAT......................................................................................................301.000.00-------------1.00--------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTATAT......................................................201.000.00---1.00------------------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTTCTG...................................................231.000.001.00---------------------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTCTTG....................................................221.000.00-------1.00--------------------------------------------------------------
...................................................................................................................................................................................................................AGTGATAAACCCAAACTGT....................1911.001.00-------------------------------1.00--------------------------------------
............................................................................................................................................................................................................................CCCAAACTGTTCAGAGGACTGCAAATC...2711.001.00--------1.00-------------------------------------------------------------
...........................................................................................................................................................................................................................ACCCAAACTGTTCAGAGGACTGCAAATCAAG3111.001.00-----------------------------------------------------1.00----------------
.................................................................................................................................................................................................................................ACTGTTCAGAGGACTTGAC......191.000.00-----1.00----------------------------------------------------------------
......................................................................................................................TTATTTCCACTTTTATATTAATCTTTTAG.......................................................................................................291.000.00-------1.00--------------------------------------------------------------
.........................................................................................................................................................................................................................AAACCCAAACTGTTCAGAGGAC...........2211.001.00-----------1.00----------------------------------------------------------
.......................................................................................................................................................................................................................ATAAACCCAAACTGTTCAGAGGACTGC........2711.001.00-1.00--------------------------------------------------------------------
.......................................................................................................................................................................................................................ATAAACCCAAACTGTTCAGAGGA............2311.001.00-------------------------------------------1.00--------------------------
............................................................................................................................................................................................................TGTTAGGAGTGATAACCC............................181.000.00---------------------------------------------------------------1.00------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTTTCG...................................................231.000.00-------1.00--------------------------------------------------------------
................................................................................................................................................................................................................AGGAGTGATAAACCCAAACTGTTCAGAGGACTG.........3311.001.00-----------------------------1.00----------------------------------------
......................................................................................................ATGTTTGATTTGTTGTTTATTTCCACTCTTA.....................................................................................................................311.000.00----1.00-----------------------------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTGCAAATC...2411.001.00--------1.00-------------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTCTTG...................................................231.000.00-------1.00--------------------------------------------------------------
..................................................................................................................................................................................................................................CTGTTCAGAGGACTGCACA.....191.000.00----------------------------------1.00-----------------------------------
................................................................................................................................................................TGGAAGTGAACTACTGAATCT.....................................................................2111.001.00--------------------1.00-------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTATCAC..................................................241.000.00----1.00-----------------------------------------------------------------
.................................................................................................................................................................................ATCTTTTTTTCTTTTTTTCGAG...................................................221.000.001.00---------------------------------------------------------------------
..................................................................................................................................................AGCTAGCTTGGATTTGGAAGTG..................................................................................2211.001.00-----------------------------------------------------------1.00----------
........................................................................................................................................................................................................................................AGAGGACTGCAAATCAAGTA201.000.00-----------------------------------------------1.00----------------------
.................................................................................................................................................................................ATCTTTTTTTCTTTTTTGGAG....................................................211.000.001.00---------------------------------------------------------------------
........................................................................................................................................................................AACTACTGAATCTTTTTTTCTTTTTTTACAAG..................................................321.000.00---1.00------------------------------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTGCAAATCAAG2711.001.00----------------1.00-----------------------------------------------------
.......................................................................................................................................................................................................................ATAAACCCAAACTGTTCAGAGGACTG.........2611.001.00---------------------1.00------------------------------------------------
...............................................................................................................................................................................................................................AAACTGTTCAGAGGACTTCAA......2111.002.00--------------------------------------------1.00-------------------------
..............................................................................................................................................................................................................................CAAACTGTTCAGAGGAC...........1711.001.00-----------------------1.00----------------------------------------------
.........................................................................................................................................................................................................................................GAGGACTGCAAATCAAGTT191.000.00--------------------1.00-------------------------------------------------
......................................................................................................................................................................................TTTTTCTTTTTTTATAAGCTATG.............................................231.000.00---1.00------------------------------------------------------------------
.......................................................................................................................................................................................................................ATAAACCCAAACTGTTCAGAGG.............2211.001.00--------------------------1.00-------------------------------------------
.....................................................................................................................................................................................TTTTTTCTTTTTTTATACGT.................................................201.000.00---1.00------------------------------------------------------------------
..........................................................................................................................................................................................................................AACCCAAACTGTTCAGAGGACTGCAAA.....2711.001.00---------------1.00------------------------------------------------------
...........................................................................................................................................................................................................TTGTTAGGAGTGATAAACC............................1911.001.00---------------------------------------1.00------------------------------
..................................................................................................................................................................................................................................CTGTTCAGAGGACTGCAAATC...2111.001.00------------------------------------------1.00---------------------------
..........................................................................................................................................................................................................TTTGTTAGGAGTGATAAACCC...........................2111.001.00---------------------------------------------------1.00------------------
..................................................................................................................................................................................TCTTTTTTTCTTTTTTTATCTG..................................................221.000.00----1.00-----------------------------------------------------------------
...........................................................................................................................................................................................................................ACCCAAACTGTTCAGAGGACTGC........2311.001.00-----------------------------------------1.00----------------------------
....................................................................................................................................................................................TTTTTTTCTTTTTTTATAAACAG...............................................231.000.00-------------1.00--------------------------------------------------------
.................................................................................................................................................................................................................................ACTGTTCAGAGGACTGCAAACCA..2311.003.00----1.00-----------------------------------------------------------------
...............................................................................................................................................................TTGGAAGTGAACTACTGAATCTTTTTTTCT.............................................................3011.001.00----------------------------------------------------1.00-----------------
..........................................................................................................................................................................................................................................AGGACTGCAAATCAAGTAG191.000.00-1.00--------------------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTGGTA...................................................231.000.00----1.00-----------------------------------------------------------------
..........................................................................................................................................................................................................................AACCCAAACTGTTCAGAGGACTGC........2411.001.00--------1.00-------------------------------------------------------------
.....................................................................................................................TTTATTTCCACTTTTATATTAATCTTTTTAG......................................................................................................3111.001.00-------1.00--------------------------------------------------------------
................................................................................................................................................................................AATCTTTTTTTCTTTTTTTTTGG...................................................231.000.001.00---------------------------------------------------------------------
...................................................................................................................................................................................................................................TGTTCAGAGGACTGCAAA.....1820.500.50-----------------------------------------------------------------0.50----
...........................................................................................................................................................................................................TTGTTAGGAGTGATAAA..............................1720.500.50------------------------------------------------------------------0.50---
......................................................................................................................................................................................................................................TCAGAGGACTGCAAATCAA.1950.200.20-0.20--------------------------------------------------------------------
...................................................................................................................................................................................................................................TGTTCAGAGGACTGC........1550.200.20-------------------------------------------------------------------0.20--
....................CTTAAAATATTGGAGA......................................................................................................................................................................................................................1670.140.14--------------------------------------------------------------------0.14-

Antisense strand
TAATTTGAAACAATTAGTGTCTTAAAATATTGGAGAATATGGTATGTCTCTCCATTTATCCACAGATGTTTAAATTTTCTTAGTTTTTTCATATAGGATATAATGTTTGATTTGTTGTTTATTTCCACTTTTATATTAATCTTTTTAGCTAGCTTGGATTTGGAAGTGAACTACTGAATCTTTTTTTCTTTTTTTATAAGCTTTTGTTAGGAGTGATAAACCCAAACTGTTCAGAGGACTGCAAATCAAG
............................................................................................................(((((((.(((((((((((..((((..(((..((....)).)))..))))..))))))))))).)).)))))......................................................................
........................................................................................................105............................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		TAX577588(Rovira)
total RNA. (breast)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR029126(GSM416755)
143B. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)		GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		GSM532886(GSM532886)
G850T. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335
....................................................................................................................................................................................................................................GTTCAGAGGACTGCATCTG... 198.000.00-1.00-------3.001.00-1.00---------------------------1.00--------------------1.00--------
....................................................................................................................................................................................................................................GTTCAGAGGACTGCAATCTG.. 202.000.00---------2.00------------------------------------------------------------
.....................TTAAAATATTGGAGAATAG.................................................................................................................................................................................................................. 191.000.00-------1.00--------------------------------------------------------------
...........................................................................................................................................................................TACTGAATCTTTTTTCCAA............................................................ 191.000.00-----1.00----------------------------------------------------------------
..........TTTAAGACACTAATTG................................................................................................................................................................................................................................ 1670.140.14---------------------------------------------------------------------0.14