ID: uc010oqo.1_intron_2_0_chr1_70694239_f.3p
GENE: SRSF11(3)
chr1:70696040-70696289+


(2)
B-CELL 		(4)
BRAIN 		(1)
BREAST 		(21)
CELL-LINE 		(5)
CERVIX 		(4)
HEART 		(1)
HELA 		(8)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(13)
SKIN 		(1)
TESTES 		(2)
XRN.ip

Sense strand
TTCGGTGTTAGCTCTTGGTCAGTGTTTTAGAACAGTAGACATAGTCTACGGTAAGGAATAGTCTTAATTGGTAAAACTAAGATAGCTGAATTTGGAAGGAACTCTTAATAGTAATGGATTTGGGGATTTTTTAGGTTCCTTGGTTAATGTTTGTTTCTTTTGTCTGTTTCTTTTTCTTTCATTTCTACACATTCATGCAGTATTTCATGGTTCTATCAAAGCAGCAGTAAAAAAAATACTCTTGACGCAT
....................................................................................................................(((..(((((((.....)))))))..)))..................((((.............................))))..................................................
....................................................................................................................117........................................................................................208........................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189785DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037935(GSM510473)
293cand3. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040014(GSM532899)
G623N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
.........................................................................................................................GGGGATTTTTTAGGTAG................................................................................................................17164.000.00153.00---8.00-----------------1.00--------------1.00-----1.00------------------
......................................................................................................................................................................TTTCTTTTTCTTTCATTTCTACACATTCATG.....................................................31129.0029.00--15.009.00--3.00-----2.00-------------------------------------------------
.........................................................................................................................GGGGATTTTTTAGGTAGT...............................................................................................................1828.000.0020.00---8.00---------------------------------------------------------
....................................................................................................................................................................................ATTTCTACACATTCATGCAGTATT..............................................24117.0017.00----------11.00----6.00----------------------------------------------
..............................................................................AAGATAGCTGAATTTGGAAGG.......................................................................................................................................................21117.0017.00-8.00---9.00--------------------------------------------------------
............................................................................................................................................................................TTTCTTTCATTTCTACACATTCATG.....................................................25114.0014.00--4.007.00--1.00-----2.00-------------------------------------------------
...............................................................................AGATAGCTGAATTTGGAAGG.......................................................................................................................................................20110.0010.00-3.00---1.00-5.00------------1.00-----------------------------------------
..............................................................................AAGATAGCTGAATTTGGAAG........................................................................................................................................................2019.009.00-8.00-----1.00------------------------------------------------------
................................................................................................................................................................................TTTCATTTCTACACATTCATG.....................................................2118.008.00--4.003.00--1.00-------------------------------------------------------
...............................................................................AGATAGCTGAATTTGGAAG........................................................................................................................................................1917.007.00-4.00-----2.00-----------------1.00------------------------------------
.......................................................................................................................................................................TTCTTTTTCTTTCATTTCTACACATTCATG.....................................................3017.007.00--3.002.00--1.00------1.00------------------------------------------------
.........................................................................................................................GGGGATTTTTTAGGTAGTG..............................................................................................................196.000.00----6.00---------------------------------------------------------
..............................................................................AAGATAGCTGAATTTGGAAGGA......................................................................................................................................................2216.006.00-1.00---1.00---2.00-------------1.00--------------------------------1.00-----
......................................................................................................................................................................TTTCTTTTTCTTTCATTTCTACACATTCAT......................................................3015.005.00--2.003.00----------------------------------------------------------
.........................................................................................................................................................................CTTTTTCTTTCATTTCTACACATTCATG.....................................................2815.005.00--3.001.00--------1.00-------------------------------------------------
...........................................................................ACTAAGATAGCTGAATTTGGAAGGAA.....................................................................................................................................................2615.005.00-4.00---1.00--------------------------------------------------------
......................................................................................................................................................................TTTCTTTTTCTTTCATTTCTACACATTCACG.....................................................315.000.00------3.00-----2.00-------------------------------------------------
..............................................................................AAGATAGCTGAATTTGGAAGGAAC....................................................................................................................................................2414.004.00-2.00----------------------1.00----------------------------------1.00--
.............................................................................TAAGATAGCTGAATTTGGAAGG.......................................................................................................................................................2214.004.00-2.00---2.00--------------------------------------------------------
...................................................................................AGCTGAATTTGGAAGGAACTCTTAATAGTAATGGATTTGGGGATTTTTT......................................................................................................................4914.004.00-------------------4.00------------------------------------------
..............................................................................AAGATAGCTGAATTTGGAAGGAA.....................................................................................................................................................2314.004.00-1.00---2.00-1.00------------------------------------------------------
..................................................................................................................TGGATTTGGGGATTTTTTAGGTT.................................................................................................................2313.003.00---------3.00----------------------------------------------------
..........................................AGTCTACGGTAAGGAATAGT............................................................................................................................................................................................2013.003.00----3.00---------------------------------------------------------
.................................................................................ATAGCTGAATTTGGAAGG.......................................................................................................................................................1813.003.00-2.00-----1.00------------------------------------------------------
...........................................................................................................ATAGTAATGGATTTGGG..............................................................................................................................1723.003.003.00-------------------------------------------------------------
...........................................................................ACTAAGATAGCTGAATTTGGAAGG.......................................................................................................................................................2413.003.00-1.00--------------------------1.00-------------------1.00-------------
..............................................................................AAGATAGCTGAATTTGGA..........................................................................................................................................................1813.003.00-2.00---1.00--------------------------------------------------------
................................................................................GATAGCTGAATTTGGAAGG.......................................................................................................................................................1912.002.00-1.00------------------1.00-----------------------------------------
..............................................................................................GAAGGAACTCTTAATAGT..........................................................................................................................................1812.002.00---------1.00-------1.00--------------------------------------------
..................................................................................................................................................ATGTTTGTTTCTTTTGTCTGTTCCT...............................................................................2512.001.00-----------2.00--------------------------------------------------
..................................................................................................................................................................................................................TTCTATCAAAGCAGCAGTAAAAAAAATACCTTG.......332.000.00-------------2.00------------------------------------------------
........................................................................................................................................................................TCTTTTTCTTTCATTTCTACACATTCATG.....................................................2912.002.00---2.00----------------------------------------------------------
.........................................................................AAACTAAGATAGCTGAATTTGGAAGGAAGGCG.................................................................................................................................................322.000.00---------------------2.00----------------------------------------
.................................................................................ATAGCTGAATTTGGAAGGA......................................................................................................................................................1912.002.00-------1.00---------------1.00--------------------------------------
.............................................................................TAAGATAGCTGAATTTGGAAG........................................................................................................................................................2112.002.00-1.00---1.00--------------------------------------------------------
...................................................................................................................................TAGGTTCCTTGGTTAATGTTTGTTTC.............................................................................................2612.002.00--------2.00-----------------------------------------------------
..........................................................................AACTAAGATAGCTGAATTTGGAAGGAACTCTT................................................................................................................................................3212.002.00----------------2.00---------------------------------------------
....................................................AAGGAATAGTCTTAATTGG...................................................................................................................................................................................1912.002.00----2.00---------------------------------------------------------
............................................................................................................................................TGGTTAATGTTTGTTTCTTTTGTCTGTT..................................................................................2812.002.00-----------2.00--------------------------------------------------
..........................................................................AACTAAGATAGCTGAATTTGGAAGG.......................................................................................................................................................2512.002.00-2.00------------------------------------------------------------
................................................................................................................................TTTTAGGTTCCTTGGTTAATGTT...................................................................................................2312.002.00---------2.00----------------------------------------------------
........................................................................................................................................................................................................................CAAAGCAGCAGTAAAAAGAGT.............212.000.00---------------------------2.00----------------------------------
..........................................................................................................................GGGATTTTTTAGGTTGT...............................................................................................................172.000.002.00-------------------------------------------------------------
........................................................................................AATTTGGAAGGAACTCTTAATAGTAATGG.....................................................................................................................................2912.002.00--------------------------2.00-----------------------------------
..............................................................................AAGATAGCTGAATTTGGAAGGAACT...................................................................................................................................................2512.002.00-----1.00------------------1.00-------------------------------------
.....................................................................GGTAAAACTAAGATAGCTGAATTTGGAAGGAAC....................................................................................................................................................3312.002.00----------------2.00---------------------------------------------
...................................................................................AGCTGAATTTGGAAGGAACT...................................................................................................................................................2012.002.00------------------------------------1.00--------------1.00----------
....................................................................................GCTGAATTTGGAAGGAACTC..................................................................................................................................................2011.001.00---------------------------------------------------------1.00----
..............................................TACGGTAAGGAATAGTCTTA........................................................................................................................................................................................2011.001.00-----1.00--------------------------------------------------------
..............TTGGTCAGTGTTTTAGAACAGTAG....................................................................................................................................................................................................................2411.001.00--------------------------------------------------1.00-----------
................................................................................................................AATGGATTTGGGGATTTTTTAGGTA.................................................................................................................251.000.00---------1.00----------------------------------------------------
..........................................................................AACTAAGATAGCTGAATTTGGA..........................................................................................................................................................2211.001.00--------------------------------1.00-----------------------------
.........................................................................................................................GGGGATTTTTTAGGTAGAA..............................................................................................................191.000.00----------------------------------------------------1.00---------
...............................................................................AGATAGCTGAATTTGGAAGGAACTC..................................................................................................................................................2511.001.00--------1.00-----------------------------------------------------
.........................TTTAGAACAGTAGACATAGTCT...........................................................................................................................................................................................................2211.001.00---------------------------------------------1.00----------------
.................................................................................................................................................AATGTTTGTTTCTTTTGTCTGTTTCTTTCTT..........................................................................311.000.00--------1.00-----------------------------------------------------
....................................................................................................................................................................................................................................AAAAAAAATACTCTTGACG...1911.001.00----------------------1.00---------------------------------------
...............................................................................................................................................TTAATGTTTGTTTCTTTTGTCTGTCT.................................................................................261.000.00-----------1.00--------------------------------------------------
..................................................................................................................................................ATGTTTGTTTCTTTTGTCTGTT..................................................................................2211.001.00-------------------------------1.00------------------------------
.........................................................................................................................................................................................................................AAAGCAGCAGTAAAAAAAATA............2111.001.00-1.00------------------------------------------------------------
......................................................................................................................................................TTGTTTCTTTTGTCTGTTTCTTTTCC..........................................................................261.000.00-----------1.00--------------------------------------------------
........................................................................AAAACTAAGATAGCTGAATTTGGAAGG.......................................................................................................................................................2711.001.00----------------------------------------------------------1.00---
..............................................................................................................................................................................TCTTTCATTTCTACACATTCAT......................................................2211.001.00--1.00-----------------------------------------------------------
..............................................................................................GAAGGAACTCTTAATAGTAATG......................................................................................................................................2211.001.00-----------------1.00--------------------------------------------
................................................................................................................................................................................TTTCATTTCTACACATTCAT......................................................2011.001.00------1.00-------------------------------------------------------
................................................................................................................AATGGATTTGGGGATGGTA.......................................................................................................................191.000.00-1.00------------------------------------------------------------
............................................................................................................................................................................TTTCTTTCATTTCTACACATTCATT.....................................................251.000.00---1.00----------------------------------------------------------
..............................................................................................................................................GTTAATGTTTGTTTCTTTTGTCTG....................................................................................2411.001.00---------1.00----------------------------------------------------
.............................................................................................................................................................................TTCTTTCATTTCTACACATTCATG.....................................................2411.001.00------1.00-------------------------------------------------------
..........................................................................................................................................................................TTTTTCTTTCATTTCTACACATTCATG.....................................................2711.001.00---1.00----------------------------------------------------------
...............................................................................................................................................................................CTTTCATTTCTACACATTCAT......................................................2111.001.00------1.00-------------------------------------------------------
.......................................................................................................................................................................TTCTTTTTCTTTCATTTCTACACATTCACG.....................................................301.000.00------1.00-------------------------------------------------------
...............................................................................AGATAGCTGAATTTGGAAGGAA.....................................................................................................................................................2211.001.00-------------------------------------------------------------1.00
.................................................................................................................ATGGATTTGGGGATTTTTTAGGTTCC...............................................................................................................2611.001.00--------1.00-----------------------------------------------------
.........................................................................................................................GGGGATTTTTTAGGTAACA..............................................................................................................191.000.00---------------------------------1.00----------------------------
........................................................................................................................TGGGGATTTTTTAGGTTCCTTGGTT.........................................................................................................2511.001.00--------1.00-----------------------------------------------------
.................GTCAGTGTTTTAGAACAGTAG....................................................................................................................................................................................................................2111.001.00-----------------1.00--------------------------------------------
............................................................................................................................................................CTTTTGTCTGTTTCTTTTTCCTTC......................................................................241.000.00--------1.00-----------------------------------------------------
.........................................................................................................TAATAGTAATGGATTTGGG..............................................................................................................................1911.001.00---------1.00----------------------------------------------------
..................................................................................................................................................ATGTTTGTTTCTTTTGTCTGTTTCTTTTTCC.........................................................................311.000.00-----------1.00--------------------------------------------------
...........CTCTTGGTCAGTGTTTTAGAACAGTAG....................................................................................................................................................................................................................2711.001.00----1.00---------------------------------------------------------
............................AGAACAGTAGACATAGT.............................................................................................................................................................................................................1711.001.00-----------------1.00--------------------------------------------
..........................................................................................................................GGGATTTTTTAGGTTGGT..............................................................................................................181.000.00-----------------------------------------------1.00--------------
......................................................................................................................................................................TTTCTTTTTCTTTCATTTCTACACATTCAC......................................................301.000.00-------------1.00------------------------------------------------
.........................................................................................................................GGGGATTTTTTAGGTAAC...............................................................................................................181.000.00-------------------------------------------------1.00------------
..................................................................................................................................................ATGTTTGTTTCTTTTGTCTGTTTCTTTTCCT.........................................................................311.000.00--------1.00-----------------------------------------------------
...............................................................................AGATAGCTGAATTTGGAAGGAACTCTC................................................................................................................................................271.000.00-----------1.00--------------------------------------------------
..........................TTAGAACAGTAGACATAG..............................................................................................................................................................................................................1811.001.00------------------------------1.00-------------------------------
.......................................................................................................................................................................TTCTTTTTCTTTCATTTCTACACACATG.......................................................281.000.00--1.00-----------------------------------------------------------
........................................................................................................................................................................TCTTTTTCTTTCATTTCTACACATTCAC......................................................281.000.00------1.00-------------------------------------------------------
................................................................................................................................................................................TTTCATTTCTACACATTCATGCAG..................................................2411.001.00-------------1.00------------------------------------------------
.........................................................................................................................GGGGATTTTTTAGGTAGA...............................................................................................................181.000.00---------------------------------------1.00----------------------
.......................................................................TAAAACTAAGATAGCTGAATTTGGAAGGAAC....................................................................................................................................................3111.001.00-------------1.00------------------------------------------------
...............................................................................AGATAGCTGAATTTGGAAGGA......................................................................................................................................................2111.001.00-1.00------------------------------------------------------------
.............................................................................................................................................................TTTTGTCTGTTTCTTTTTCTTTCATTTCT................................................................2911.001.00--------1.00-----------------------------------------------------
..............................................................................AAGATAGCTGAATTTGGAAGGAACTC..................................................................................................................................................2611.001.00-----------------------------------------------------1.00--------
..........................TTAGAACAGTAGACATAGTCTACGGT......................................................................................................................................................................................................2611.001.00--------1.00-----------------------------------------------------
.......................................................................................GAATTTGGAAGGAACTCTT................................................................................................................................................1911.001.00------------------------------------------------------1.00-------
................................................................................................................AATGGATTTGGGGATTTTTTAG....................................................................................................................2211.001.00----1.00---------------------------------------------------------
...................................................................................................................................TAGGTTCCTTGGTTAATGTTTGTTTCTT...........................................................................................2811.001.00--------1.00-----------------------------------------------------
.................................................................................ATAGCTGAATTTGGAAGGAACTCTTAAT.............................................................................................................................................2811.001.00-----------------------------1.00--------------------------------
..............................................................................AAGATAGCTGAATTTGGAA.........................................................................................................................................................1911.001.00-----1.00--------------------------------------------------------
.............................................................................TAAGATAGCTGAATTTGGAAGGAA.....................................................................................................................................................2411.001.00-----1.00--------------------------------------------------------
.........................................................................................................TAATAGTAATGGATTTGGGGATTTT........................................................................................................................2511.001.00-----------------------------------------1.00--------------------
................................................................................GATAGCTGAATTTGGAAGGA......................................................................................................................................................2011.001.00-----1.00--------------------------------------------------------
............................................................................................TGGAAGGAACTCTTAATAGTAATGGATTTG................................................................................................................................3011.001.00--------------------------------------1.00-----------------------
............................................................................................................................................................................TTTCTTTCATTTCTACACATCCAT......................................................241.000.00--1.00-----------------------------------------------------------
..................................................................................................................................................................TCTGTTTCTTTTTCTTTCATTTCTACACATTCATG.....................................................3511.001.00---1.00----------------------------------------------------------
..........................................................................AACTAAGATAGCTGAATTTG............................................................................................................................................................2011.001.00-----1.00--------------------------------------------------------
..........................................................................................................AATAGTAATGGATTTGGGGATTTTTTAGGCTC................................................................................................................321.000.00-----------1.00--------------------------------------------------
..........................................................................................................................................................................TTTTTCTTTCATTTCTACACATTC........................................................2411.001.00-1.00------------------------------------------------------------
.....................................................................GGTAAAACTAAGATAGCTGAATTTGGAAGG.......................................................................................................................................................3011.001.00----------------1.00---------------------------------------------
............................................................................................TGGAAGGAACTCTTAATAGTAATG......................................................................................................................................2411.001.00-----------------------------------1.00--------------------------
.................................................................................ATAGCTGAATTTGGAAGGAACTCTTAACAG...........................................................................................................................................301.000.00-------------1.00------------------------------------------------
....................................................................................GCTGAATTTGGAAGGACC....................................................................................................................................................181.000.00-------------------------1.00------------------------------------
................................................................................GATAGCTGAATTTGGAAGGAACT...................................................................................................................................................2311.001.00----------------------------------------1.00---------------------
...................................................................................AGCTGAATTTGGAAGGAAC....................................................................................................................................................1920.500.50-0.50------------------------------------------------------------
.....................................................................................CTGAATTTGGAAGGAAC....................................................................................................................................................1720.500.50----------------------------0.50---------------------------------
.....................................................................................................................................................................................................................................AAAAAAATACTCTTGACG...1820.500.500.50-------------------------------------------------------------
........................TTTTAGAACAGTAGACA.................................................................................................................................................................................................................1720.500.50-----------------------------0.50--------------------------------
..........................TTAGAACAGTAGACAT................................................................................................................................................................................................................1630.330.33------------------------------0.33-------------------------------
.................................................................................................................................................................................................................GTTCTATCAAAGCAG..........................1530.330.33-----------------0.33--------------------------------------------

Antisense strand
TTCGGTGTTAGCTCTTGGTCAGTGTTTTAGAACAGTAGACATAGTCTACGGTAAGGAATAGTCTTAATTGGTAAAACTAAGATAGCTGAATTTGGAAGGAACTCTTAATAGTAATGGATTTGGGGATTTTTTAGGTTCCTTGGTTAATGTTTGTTTCTTTTGTCTGTTTCTTTTTCTTTCATTTCTACACATTCATGCAGTATTTCATGGTTCTATCAAAGCAGCAGTAAAAAAAATACTCTTGACGCAT
....................................................................................................................(((..(((((((.....)))))))..)))..................((((.............................))))..................................................
....................................................................................................................117........................................................................................208........................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189785DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037935(GSM510473)
293cand3. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040014(GSM532899)
G623N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040024(GSM532909)
G613N. (cervix)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		TAX577745(Rovira)
total RNA. (breast)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
............................................................................................................................................................................................ACATTCATGCAGTATATG............................................ 185.000.00--------------2.00---3.00-------------------------------------------
....................................AGACATAGTCTACGGTGC.................................................................................................................................................................................................... 182.000.00----------------------------------------------1.00--------1.00------
..................................................................................................................................................................................TCATTTCTACACATTCAGA..................................................... 191.000.00----------------------------------1.00---------------------------
..............................................................................................................................................................................TCTTTCATTTCTACACCC.......................................................... 181.000.00------------------------------------------------------------1.00-
...........................................................................................................................................................................................................................AGCAGCAGTAAAAAACTTG............ 191.000.00--------------1.00-----------------------------------------------
............................................................................................................................................................................................ACATTCATGCAGTATATA............................................ 181.000.00------------------1.00-------------------------------------------
........................................................................................................................................................................................................................CAAAGCAGCAGTAAAAACT............... 191.000.00--------------1.00-----------------------------------------------
.........................................................................................................................................................................................................................AAAGCAGCAGTAAAAATCT.............. 191.000.00--------------1.00-----------------------------------------------
.........................................................................................................................................................................................................................AAAGCAGCAGTAAAATTTG.............. 191.000.00--------------1.00-----------------------------------------------
.........................................................................................................................................................................CTTTTTCTTTCATTTGAGG.............................................................. 191.000.00------------------------------------------1.00-------------------
..........................................................................................................................GGGATTTTTTAGGTTAAAC............................................................................................................. 191.000.00--------------------------------------------1.00-----------------
........................................................................................................................................................................................................................TTTTACTGCTGCTTTG.................. 1630.330.33--------------0.33-----------------------------------------------
...................................................................................................................................................................................ATGAATGTGTAGAAATG...................................................... 1740.250.25-----------------0.25--------------------------------------------