ID: uc010oog.1_intron_1_0_chr1_55130914_f.5p
GENE: HEATR8(2)
chr1:55130864-55131113+


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(2)
AGO2.ip
(8)
B-CELL
(15)
BRAIN
(19)
BREAST
(27)
CELL-LINE
(8)
CERVIX
(1)
FIBROBLAST
(5)
HEART
(2)
HELA
(4)
LIVER
(2)
OTHER
(5)
SKIN
(4)
UTERUS

Sense strand
GCCTGGTGAAGGTGCCAGAGAAGACAGAAGGTGGCAACAACATGGCTCTGGTATGCCTCCTGCCCAACCCCTAGCTGACTGTGCTGGGATACTTCCATCCTGCCAACCCCCTACCCCCCAGCCCAGCAGCCTCCGCATTCCCCATGCCTCTGCCCAGCTCTCCTTTTCTCCATAACATTCATTGCCGTCTGATGTGCCATATGCTTTGTTTATTCATCTTCTTTCTTGTTCATCTCCTCCACAAGGACAT
.......................................................................................................................(((...((((.....((((.....))))..))))...)))...............(((.(((........)))))).......................................................
...................................................................................................................116.................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189787SRR189786SRR189785SRR343335SRR343334SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR343337SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR040018(GSM532903)
G701N. (cervix)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040040(GSM532925)
G612N. (cervix)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR040030(GSM532915)
G013N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR343336SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577742(Rovira)
total RNA. (breast)
SRR040038(GSM532923)
G531N. (cervix)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR040012(GSM532897)
G648N. (cervix)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR038862(GSM458545)
MM472. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
.............................................................................................................................................................................AACATTCATTGCCGTCGGTG.........................................................201638.001.00169.00125.00133.0040.0044.0045.008.005.004.0011.002.002.001.002.002.001.004.003.001.001.00--1.00-2.001.003.00----1.001.00-1.00-1.001.001.002.00---2.00----1.00--1.001.00-1.001.002.00-1.00---------1.00-1.00--1.00--------1.00--1.001.00----1.00---1.00-1.00--1.00--------
.............................................................................................................................................................................AACATTCATTGCCGTCGGGG.........................................................20155.001.006.0023.007.003.00--2.001.00---1.00-2.00-------1.00-----1.00-1.00-1.001.00---------1.00--------------1.00------------------1.00-------------------------1.001.00-----
.............................................................................................................................................................................AACATTCATTGCCGTCGGT..........................................................19149.001.002.005.003.00----5.001.003.002.004.00---1.00--1.002.00---1.00----2.00--1.00-1.00---1.00--1.00------1.00--1.00----1.00-1.00--1.00--1.00--------1.00--1.00--1.001.00------------1.00-1.00------1.00-------
.............................................................................................................................................................................AACATTCATTGCCGTCGGCG.........................................................20128.001.006.0013.002.001.00--------1.00---------------------------1.00------1.001.001.00------------------------------------------------1.00----------
.............................................................................................................................................................................AACATTCATTGCCGTCGG...........................................................18120.001.00-1.006.002.001.00-1.002.002.00--------------1.00---1.00------1.00-----------------------------------------------------1.00----1.00---------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGTT.........................................................20117.001.002.003.00-----1.00----1.00------1.001.00-1.00----1.00-1.001.00----1.00------1.00------1.00------------------------1.00----------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCG............................................................17111.001.001.001.00-4.001.00-3.00---------------------------------------------------------1.00--------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGTA.........................................................20111.001.003.001.001.001.00--1.00---2.00----1.00----1.00----------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGAG.........................................................2018.001.002.003.001.00-1.00---------------------------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGG..........................................................1916.001.00-1.00----1.001.00-----1.00-------1.001.00--------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGGGTT.......................................................226.000.00--6.00----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................ACATTCATTGCCGTCGGTG.........................................................196.000.002.002.001.001.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................TCTCCTTTTCTCCATAACATAG......................................................................225.000.004.00--1.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGA..........................................................1915.001.00----------1.00----1.00-------------------------1.00----------1.001.00-------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGTG.........................................................204.000.00---1.00--2.00-1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGTGG........................................................214.000.00-1.00------2.00------------------------------------------------------------------------1.00---------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCAGTG.........................................................2013.001.001.00---1.00------------------------------------------------------------------1.00-------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGC..........................................................1913.001.00-2.00----------------------------------------------------------------------------------------1.00------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGTTG........................................................212.000.00--------------1.00-----1.00----------------------------------------------------------------------------------------
........................................................................AGCTGACTGTGCTGGGATACTTCCAT........................................................................................................................................................2612.002.00----------2.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGCT.........................................................2012.001.00------------1.00------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGTGG.........................................................2012.001.00--------1.00------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGATG.........................................................2012.001.00-1.00----------------------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGCTA.........................................................2012.001.00--------------1.00---------------1.00------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGTTG.........................................................2012.001.00--------1.00-------------------1.00--------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCCGTG.........................................................2012.001.00--2.00----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGCG.........................................................202.000.00---1.00-------1.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGTC.........................................................2012.001.00-----------------------1.00------------------------------1.00------------------------------------------------------
..............................................................................................................................................................................ACATTCATTGCCGTCGGT..........................................................182.000.00---------------------1.001.00--------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTTGGG..........................................................1921.500.50--1.50----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CTCTCCTTTTCTCCATAGG..........................................................................191.000.00-----------------------------------------------------------------------------1.00-------------------------------
.....GTGAAGGTGCCAGAGCCC...................................................................................................................................................................................................................................181.000.00---------------------------------------------1.00---------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCCGCT.........................................................2011.001.00-------------------------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTACCG........................................................2111.001.00--------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGTGGG.......................................................221.000.00-1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGCA..........................................................1911.001.00-1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGC...........................................................1811.001.00--------------1.00----------------------------------------------------------------------------------------------
........................................................................................................................GCCCAGCAGCCTCCGGGAA...............................................................................................................191.000.00-----------------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGAGGG.......................................................221.000.00-1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCT............................................................1711.001.00-----------------------------------------------------------------------------------------1.00-------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGTTT.........................................................2011.001.001.00------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGCTG.........................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGCC.........................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGAT.........................................................2011.001.00-----------1.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGAAG.........................................................2011.001.00--------------------------------------------------1.00----------------------------------------------------------
.............................................................................ACTGTGCTGGGATACAAA...........................................................................................................................................................181.000.00------------------1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCCAGG.........................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGTGT.........................................................2011.001.001.00------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCATTG.........................................................2011.001.001.00------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGGC.........................................................2011.001.00---------------1.00---------------------------------------------------------------------------------------------
.........................AGAAGGTGGCAACAAAC................................................................................................................................................................................................................171.000.00--------------------------------------------1.00----------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCCGGT.........................................................2011.001.00-----------------------------1.00-------------------------------------------------------------------------------
.................................................................................................................CCCCCCAGCCCAGCAGCCTCCGCATTC..............................................................................................................2711.001.00------------1.00------------------------------------------------------------------------------------------------
............................................................................................................................................................................TAACATTCATTGCCGTCGGCG.........................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................ACATTCATTGCCGTCGGAG.........................................................191.000.001.00------------------------------------------------------------------------------------------------------------
........AAGGTGCCAGAGAAGACGCGC.............................................................................................................................................................................................................................211.000.00--------------------------------------------1.00----------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGAA.........................................................2011.001.00--------------------------------------1.00----------------------------------------------------------------------
.........................................................................GCTGACTGTGCTGGGATACTTCT..........................................................................................................................................................231.000.00----------1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGTATC.......................................................221.000.00------1.00------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGA...........................................................1811.001.00------------------------1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCCGCG.........................................................2011.001.00--1.00----------------------------------------------------------------------------------------------------------
..........................................................................CTGACTGTGCTGGGATACTTCT..........................................................................................................................................................221.000.00-------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGTGTT.......................................................221.000.00--1.00----------------------------------------------------------------------------------------------------------
...TGGTGAAGGTGCCAGAGAAGACAGA..............................................................................................................................................................................................................................2511.001.00-----------------------------------------------------1.00-------------------------------------------------------
.......................................ACATGGCTCTGGTATGCCTCC..............................................................................................................................................................................................2111.001.00----------1.00--------------------------------------------------------------------------------------------------
........................................................................AGCTGACTGTGCTGGGATACTTC...........................................................................................................................................................2311.001.00----------1.00--------------------------------------------------------------------------------------------------
.............................................................................................................CCTACCCCCCAGCCCCGTC..........................................................................................................................191.000.00------------------------------------------------------------------------------------------------1.00------------
.............................................................................................................................................................................AACATTCATTGCCGTCTGT..........................................................191.000.00-----------------------------------------------------------------------------------1.00-------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGGT.........................................................2011.001.00--1.00----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTC.............................................................1611.001.00-1.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TCATCTCCTCCACAAGTGA..191.000.00------------------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGCT..........................................................1911.001.00-----------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................................TAACATTCATTGCCGTCTGTGGG.......................................................231.000.00-1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGGGA.........................................................2011.001.00-1.00-----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCCGT..........................................................1911.001.00------------------1.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCGAT..........................................................1911.001.00-------------------------------------------------------------------1.00-----------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCTTGTA........................................................2111.001.00--------1.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTCCATG.........................................................2011.001.00-----------1.00-------------------------------------------------------------------------------------------------
.............................................................................................................................................................................AACATTCATTGCCGTAGCT..........................................................1920.500.50---------------------------------------------------------------------------------------------------------0.50---
.............................................................................................................................................................................AACATTCATTGCCGT..............................................................1520.500.50------0.50------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................TGCCGTCTGATGTGC.....................................................1530.330.33----------------------------------------------------------------------------------------------------------0.33--
...........................................................................................................................................CCCCATGCCTCTGCCC...............................................................................................1690.110.11------------------------------------------------------------------------------------------------------------0.11

Antisense strand
GCCTGGTGAAGGTGCCAGAGAAGACAGAAGGTGGCAACAACATGGCTCTGGTATGCCTCCTGCCCAACCCCTAGCTGACTGTGCTGGGATACTTCCATCCTGCCAACCCCCTACCCCCCAGCCCAGCAGCCTCCGCATTCCCCATGCCTCTGCCCAGCTCTCCTTTTCTCCATAACATTCATTGCCGTCTGATGTGCCATATGCTTTGTTTATTCATCTTCTTTCTTGTTCATCTCCTCCACAAGGACAT
.......................................................................................................................(((...((((.....((((.....))))..))))...)))...............(((.(((........)))))).......................................................
...................................................................................................................116.................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR189787SRR189786SRR189785SRR343335SRR343334SRR189782GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577579(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577589(Rovira)
total RNA. (breast)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR343337SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR040018(GSM532903)
G701N. (cervix)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040040(GSM532925)
G612N. (cervix)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR040030(GSM532915)
G013N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR040011(GSM532896)
G529T. (cervix)
SRR343336SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
TAX577742(Rovira)
total RNA. (breast)
SRR040038(GSM532923)
G531N. (cervix)
SRR191415(GSM715525)
33genomic small RNA (size selected RNA from t. (breast)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR040012(GSM532897)
G648N. (cervix)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
TAX577453(Rovira)
total RNA. (breast)
SRR038862(GSM458545)
MM472. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................................CAACCCCCTACCCCCTAA................................................................................................................................. 182.000.00-------------------------------------------------------------1.00----------------------1.00------------------------
...........................................................................................................................................CCCCATGCCTCTGCCCAGATG.......................................................................................... 212.000.00----------------------------------------------2.00--------------------------------------------------------------
.......................................................................................................CAACCCCCTACCCCCTATA................................................................................................................................ 191.000.00---------------------------------------------------1.00---------------------------------------------------------
.......................................................................................................................................................................................................................ATCTTCTTTCTTGTTCAA................. 181.000.00-----------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................CAACCCCCTACCCCCTGTG................................................................................................................................ 191.000.00---------------------------------------------1.00---------------------------------------------------------------
................................................................................................................................................TGCCTCTGCCCAGCTCCAG....................................................................................... 191.000.00---------------------------------------------------------------------------------------1.00---------------------
...................................................................................................CTGCCAACCCCCTACAATA.................................................................................................................................... 191.000.00----------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................CAACCCCCTACCCCCTATG................................................................................................................................ 191.000.00---------------------------------------------------------------------1.00---------------------------------------
......................................................................................................CCAACCCCCTACCCCCAAT................................................................................................................................. 191.000.00---------------------------------------------------------------------------------------------------1.00---------
............................................................................................................CCCTACCCCCCAGCCTGGT........................................................................................................................... 191.000.00---------------------------------1.00---------------------------------------------------------------------------
........AAGGTGCCAGAGAAGAGTC............................................................................................................................................................................................................................... 191.000.00--------------------------------------------------------------1.00----------------------------------------------
......................................................................................................CCAACCCCCTACCCCCTTGG................................................................................................................................ 201.000.00-----------------------------------------------------------1.00-------------------------------------------------
.................................GGCATACCAGAGCCATGTTGTTGC................................................................................................................................................................................................. 2411.001.00-----------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................CAACCCCCTACCCCCTAT................................................................................................................................. 181.000.00--------------------------------------------------------------------------------1.00----------------------------
.....................................................................................................GCCAACCCCCTACCCGGG................................................................................................................................... 181.000.00-----------------------------------------------------------------1.00-------------------------------------------
...................................................................................................CTGCCAACCCCCTACAACA.................................................................................................................................... 191.000.00------------------------------------1.00------------------------------------------------------------------------
......................................................................................................CCAACCCCCTACCCCCAAAG................................................................................................................................ 201.000.00------1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................CCCCATGCCTCTGCCCACTG........................................................................................... 201.000.00------1.00------------------------------------------------------------------------------------------------------
......................................................................................................CCAACCCCCTACCCCAAT.................................................................................................................................. 181.000.00------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................CCCAGCAGCCTCCGCGC................................................................................................................ 171.000.00------------1.00------------------------------------------------------------------------------------------------
...................................................................................................................CCCCAGCCCAGCAGCAGGA.................................................................................................................... 191.000.00--------------------1.00----------------------------------------------------------------------------------------
..............................................................................................CCATCCTGCCAACCCCTGAG........................................................................................................................................ 201.000.00--------------------------------------------------------------------------------------------------------1.00----
..............................................AGGAGGCATACCAGA............................................................................................................................................................................................. 1530.330.33-----------------------------------------------------------------------------------------------------------0.33-