ID: uc010oll.1_intron_4_0_chr1_45798507_r.3p
GENE: (2)
chr1:45798457-45798706-


(2)
AGO2.ip
(28)
B-CELL
(12)
BRAIN
(5)
BREAST
(21)
CELL-LINE
(1)
HEART
(6)
LIVER
(2)
OTHER
(5)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GGGTGGGTGTAGAGAAGGCTTCCTCTACCACCTTCACCCTTGACCTTGTCTCTTTCTGCCTGCCTGTGGCTATAGAAGTGGCCTACACTGCAGGACCTGGCCAGTGCTTCCCTGGAGGTGAGAGCCACCCTAGGGTAGGGGAAATAGGAACAATAGAGGGACTGACGGGTGATCTCTTTGACCTCTGATCCTACCCACAGGAGGTGAATCAACTCTGGGCTGGCCTGGGCTACTATTCTCGTGGCCGGCG
.................................................................................................................................................................(((..((((((((............))))..)))).)))..................................................
.....................................................................................................................................................150...............................................200................................................
SizePerfect hitTotal NormPerfect NormSRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
..........................................................................................................................................................AGAGGGACTGACGGGGGCA.............................................................................19398.000.6714.0014.006.001.002.003.005.00--5.002.002.003.00-2.002.00-1.002.002.00--3.00-3.00-2.002.001.002.00-2.00--1.002.001.00-1.001.00-1.00-------1.001.001.00---1.00-----1.00--1.00----1.001.00-1.001.00-------
..........................................................................................................................................................AGAGGGACTGACGGGGGC..............................................................................18338.000.67--1.002.005.002.003.00---2.002.00-3.001.00---1.00-2.001.00---3.001.001.00----1.00---1.00--1.00-------------1.00---1.00--1.00----1.00---------1.00-----
..........................................................................................................................................................AGAGGGACTGACGGGGG...............................................................................17319.000.67--2.002.001.001.00-7.00-----1.00-------1.00----------------------1.00-----------1.00------1.00--1.00--------------
.................................................................................................................................................................................TTGACCTCTGATCCTACCCACT...................................................227.000.00--------6.00-----------------------------------------------------1.00------------------
..........................................................................................................................................................AGAGGGACTGACGGGGAA..............................................................................1836.000.672.002.001.00------------1.00-----------------------------------------------------------------
.................................................................................................................................................................................TTGACCTCTGATCCTACCCACA...................................................2215.005.00----------------4.00-----------------------1.00----------------------------------------
............................................................................................................................................................AGGGACTGACGGGTGCAT............................................................................185.000.00---2.001.00-------1.00-----------------------------1.00--------------------------------------
.................................................................................CCTACACTGCAGGACCTGGCCAGTATC..............................................................................................................................................273.000.00-----------------------3.00---------------------------------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGCATT.............................................................................1932.000.67---2.00-----------------------------------------------------------------------------
.............................................................................................................................................................GGGACTGACGGGTGATCTCTTTGA.....................................................................2412.002.00---------------------------------2.00-----------------------------------------------
.............................................................................................................................................................GGGACTGACGGGTGATCTCTTTGACCTCTG...............................................................3011.001.00------------------------------1.00--------------------------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGGGTA.............................................................................1931.000.67-------------------1.00-------------------------------------------------------------
..........................................................................................................................................................................................................................................ATTCTCGTGGCCGGCTCCA191.000.00---------------1.00-----------------------------------------------------------------
.............................................................................................................................................................GGGACTGACGGGTGATC............................................................................1711.001.00---------------------1.00-----------------------------------------------------------
......................................................................................................................TGAGAGCCACCCTAGGGTAGGGGAAATAGGAAC...................................................................................................3311.001.00---------------------------------------------1.00-----------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGGCCG.............................................................................1931.000.67----------1.00----------------------------------------------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGGCAT.............................................................................1931.000.67-----------------------------------------------------------1.00---------------------
..........................................................................................................................................................AGAGGGACTGACGGGGGT..............................................................................1831.000.67---1.00-----------------------------------------------------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGGAC..............................................................................1831.000.67-----1.00---------------------------------------------------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGTGC..............................................................................181.000.00----------------------------------------------------1.00----------------------------
..................................................................................................................................................................................................................AACTCTGGGCTGGCCTGGGCTACTAT..............2611.001.00-------------------------------------------1.00-------------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGGGCG.............................................................................1931.000.67--------------------1.00------------------------------------------------------------
.......................................................................................................................................................................................TCTGATCCTACCCACAG..................................................1711.001.00------------------------------------------------1.00--------------------------------
.................................................................................................................................................................................TTGACCTCTGATCCTACCCACAG..................................................2311.001.00------------------------------------------------------1.00--------------------------
.GGTGGGTGTAGAGAAGTGCA.....................................................................................................................................................................................................................................201.000.00-------------------------------------1.00-------------------------------------------
.................................................................................................................................................AGGAACAATAGAGGGACTGACGGG.................................................................................2411.001.00-----------------------------------------------1.00---------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGGGG..............................................................................1831.000.67-----1.00---------------------------------------------------------------------------
................................................................................................................................................................................TTTGACCTCTGATCCTACCCACA...................................................2311.001.00-----------------------------------------------------------------------1.00---------
.....................................CCTTGACCTTGTCTCGGTC..................................................................................................................................................................................................191.000.00----------------------------1.00----------------------------------------------------
.........................................................................................................................................................TAGAGGGACTGACGGGTGA..............................................................................1911.001.00--------------------------------------1.00------------------------------------------
..................................................................................................................................................................................................................AACTCTGGGCTGGCCTGGGCTACT................2411.001.00-------------------------------------1.00-------------------------------------------
....................................................................................................................................GGGTAGGGGAAATAGGAAC...................................................................................................1911.001.00----------------------------------------------1.00----------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGGCA..............................................................................1831.000.67----------------------------------------------------------1.00----------------------
..........................................................................................................................................................AGAGGGACTGACGGGGGGA.............................................................................1931.000.67-----------------1.00---------------------------------------------------------------
..........................................................................GAAGTGGCCTACACTGCAGGACCTGGCCAGTG................................................................................................................................................3211.001.00------------------------------1.00--------------------------------------------------
..........................................................................................................................................................AGAGGGACTGACGGGGCCA.............................................................................1931.000.67-----------1.00---------------------------------------------------------------------
.....................................CCTTGACCTTGTCTCTTTATG................................................................................................................................................................................................211.000.00-------------------------------------------------------------------1.00-------------
..............................................................................................................................................................................TCTTTGACCTCTGATCCTACCCACAG..................................................2611.001.00--------------------------------1.00------------------------------------------------
............................................................................................................................................................AGGGACTGACGGGTGCATT...........................................................................191.000.00--------------1.00------------------------------------------------------------------
..........................................................................................................................................................AGAGGGACTGACGGG.................................................................................1530.670.67----------------------------------------------------------------------------0.330.33---
....GGGTGTAGAGAAGGC.......................................................................................................................................................................................................................................1590.110.11--------------------------------------------------------------------------------0.11

Antisense strand
GGGTGGGTGTAGAGAAGGCTTCCTCTACCACCTTCACCCTTGACCTTGTCTCTTTCTGCCTGCCTGTGGCTATAGAAGTGGCCTACACTGCAGGACCTGGCCAGTGCTTCCCTGGAGGTGAGAGCCACCCTAGGGTAGGGGAAATAGGAACAATAGAGGGACTGACGGGTGATCTCTTTGACCTCTGATCCTACCCACAGGAGGTGAATCAACTCTGGGCTGGCCTGGGCTACTATTCTCGTGGCCGGCG
.................................................................................................................................................................(((..((((((((............))))..)))).)))..................................................
.....................................................................................................................................................150...............................................200................................................
SizePerfect hitTotal NormPerfect NormSRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015362(GSM380327)
NaÌøve B Cell (Naive138). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
TAX577580(Rovira)
total RNA. (breast)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038861(GSM458544)
MM466. (cell line)
TAX577590(Rovira)
total RNA. (breast)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
.......................................................................................................................................................................................TCTGATCCTACCCACAAGT................................................ 191.000.00----------------------------------1.00----------------------------------------------
.......................................................................................................GTGCTTCCCTGGAGGGGC................................................................................................................................. 181.000.00--------------------------------------------------------------------1.00------------
...................................................CTTTCTGCCTGCCTGTT...................................................................................................................................................................................... 171.000.00-----------------1.00---------------------------------------------------------------
..............................................................................TGGCCTACACTGCAGTTAT......................................................................................................................................................... 191.000.00-----------------1.00---------------------------------------------------------------
..........................ACCACCTTCACCCTTGTG.............................................................................................................................................................................................................. 181.000.00--------------------------------------------------------------------------1.00------
.....................................................................................................................................TTCCTATTTCCCCTACC.................................................................................................... 1750.400.40------------------------------------------------------------------------------0.200.20-