ID: uc010ohd.1_intron_4_0_chr1_32792679_f
GENE: HDAC1(5)
chr1:32792629-32793186+


(1)
AGO2.ip 		(1)
AGO3.ip 		(10)
B-CELL 		(5)
BRAIN 		(4)
BREAST 		(20)
CELL-LINE 		(3)
CERVIX 		(1)
HEART 		(4)
HELA 		(7)
LIVER 		(2)
OTHER 		(15)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCTGGAACTGCTAAAGTATGCCTGCCTGGCCTTGTCTCTTGGAAGAGCACCTTAGGCCAGGTTCCCATTTCCCTCTTCCCCTGGGCTTGCCTCCCTAGTTTGCTTTTCCTACCGATGTGCTGGCTAGGATGTGCTCGGTGAGTGTCTCTGGCCATCATCTCCTTGATGGGGTCTTGGTTTGATCTGAGCCACGGCATGATCAGGGGCAGATGCTGCTCAGATCCTGCCTCCAGAGTGTCCCTGTGTGGCTGGAGTTGACCCTGGCTGTAGAGTAGGAAGATCGGACTTGGTCGGCTTGGTCAGGCCTCTGGAGACACCCGGCCGCTCTTCCACCTTCCTTCAGCCAGTTTCCACGTCTCTGGTGCTTAGAGATACCTGAGGGAGGCAGCCAGCCCGGTAAGCTGGGAGCTAGCGCCCTTGGCACGTCCCATCCCCAAAGAGCCCCCAGACCCCTGACCCCCTTCTGATCCTAGGTATCACCAGAGGGTGCTGTACATTGACATTGATATTCACCATGGTGACG
.............................................................................................................................................................................................................((((((((((((((.(((((..((((.((((..((((((...)))))).)))).))))(((.((...(((((.((..(((((........)))))..)).))..)))...))))).......))))))))))))))....)))))................................................................................................................................................................................................................
.........................................................................................................................................................................................................202...................................................................................................................................................352............................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189787SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038860(GSM458543)
MM426. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................................................................................................................................................................................................GCTTGGTCAGGCCTCTGGAG..................................................................................................................................................................................................................2017.007.00---7.00------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGACA.....................2116.006.002.002.00--2.00-----------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGTGCTGTACATTG........................1914.004.001.00-2.00---1.00---------------------------------------------------------------------
................ATGATATCGTCTTGGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.004.00-1.00----1.00--1.00-------------------------------------------1.00----------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGACATT...................2313.003.00-1.00----1.00-------------------------1.00-------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGAGGGTGCTGTACATTGACATT...................2613.003.003.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACATTGATATTCAAGA........203.000.00-----3.00----------------------------------------------------------------------
..............................................................................................................................................................................................................TCTTGGTTTGATCTGAGCCACGG.........................................................................................................................................................................................................................................................................................................................................2312.002.00-------------------2.00--------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGTGCTGTACATTGACATTGA.................2612.002.00----------2.00-----------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGTGCTGTACATTGA.......................2012.002.00--1.00---------------------------------1.00---------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGTGCTGTACATTGACA.....................2212.002.00--------------------------2.00-------------------------------------------------
...........................................................................................................................................................TGGCTAGGATGTGCTCGGTGAGTGT..........................................................................................................................................................................................................................................................................................................................................................................................2512.002.00----------------------------1.00-----------------------------1.00-----------------
...........................................................................................................................................................TGGCTAGGATGTGCTCGGTGAGTGTCTCTGG....................................................................................................................................................................................................................................................................................................................................................................................3112.002.00--------2.00-------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGAGGGTGCTGTACATTGACATT...................2712.002.00---------------------------------1.00-1.00----------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGAGGGTGCTGTACATTGACATTGAT................2912.002.00-------1.00-----------------------1.00--------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAGGGTGCTGTACATTGAC......................2212.002.001.00-----------------------1.00---------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGACATTG..................2412.002.001.00----------------1.00----------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTAGAGATACCTGAGGGAGGCAGCCAG...................................................................................................................................3112.002.00-------------------------2.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGTGCTGTACATTGACATT...................2412.002.00-1.00-------1.00------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................TTAGAGATACCTGAGGG.............................................................................................................................................1712.002.00----------------2.00-----------------------------------------------------------
...............AATGATATCGTCTTGGCCATCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00----2.00-----------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................AGGAAGATCGGACTTGGTCGGCTT..................................................................................................................................................................................................................................2411.001.00----------------------------------------------------------------------1.00-----
.................................ATCCTGGAACTGCTAAAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------
...................ATATCGTCTTGGCCATCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------1.00--------
..................GATATCGTCTTGGCCATCCTGGAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00--------------------------------------------------------------------1.00-------
...............................................................................................................................................................................................................................................................................................AGTTGACCCTGGCTGTAGAGTAGGAAGATCG................................................................................................................................................................................................................................................3111.001.00--------------------1.00-------------------------------------------------------
................ATGATATCGTCTTGGCCATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00-----------------------1.00----------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGAGGGTGCTGTACATTGA.......................2211.001.00-------------------------------------------1.00--------------------------------
................ATGATATCGTCTTGGCCATCCTGGAACTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00---------------------------------------------------------------------1.00------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGAGGGTGCTGTT.............................161.000.00----------------------------------1.00-----------------------------------------
................ATGATATCGTCTTGGGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-1.00--------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................CCCTGGCTGTAGAGTAGGA......................................................................................................................................................................................................................................................1911.001.00--------------------1.00-------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACATTGATATTCACGA........191.000.00-----1.00----------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAGGGTGCTGTACATT.........................1911.001.00----------------------------------------1.00-----------------------------------
................................................................................................................................................................................................................TTGGTTTGATCTGAGCCACGGCA.......................................................................................................................................................................................................................................................................................................................................2311.001.00-----------------------------------------------------------1.00----------------
...................................................................................................................................................................................................................................................................................................................TAGGAAGATCGGACTTGGTCGGC....................................................................................................................................................................................................................................2311.001.00------------------------------------------1.00---------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCCCCAGACCCCTGACCCCCTTCTGACCCT....................................................331.000.00-------1.00--------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................AAGATCGGACTTGGTCGGCTTG.................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------1.00--------------
....................................................................................................................................................................................................................................................................................................................................................................................CTTCAGCCAGTTTCCACGT.......................................................................................................................................................................1911.001.00----1.00-----------------------------------------------------------------------
..............CAATGATATCGTCTTGGCCATCCTGGAACTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00--------1.00-------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................TGTAGAGTAGGAAGATC.................................................................................................................................................................................................................................................1711.001.00---------1.00------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................GAGTAGGAAGATCGGACTTGGTCGGC....................................................................................................................................................................................................................................2611.001.00---------1.00------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGAGGGTGCTGTACATTGAC......................2311.001.00--------------------------------------1.00-------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGGCAGCCAGCAAT...............................................................................................................................181.000.00-----------------------------------------------------------------------1.00----
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGCTGTACATTGACATTGA.................2211.001.00-----------------1.00----------------------------------------------------------
............GTCAATGATATCGTCTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00---------------------------------------------------------------1.00------------
....................TATCGTCTTGGCCATCCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------1.00----------------------------------
..........................................................GCCTGGCCTTGTCTCTTGGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------------1.00-------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTATCACCAGAGGGTGCTGTA.............................2311.001.00-1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAGGGTGCTGTACATTGACA.....................2311.001.00-1.00--------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCCTTCTGATCTCAC..................................................191.000.00-----------------------------1.00----------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGATG.....................2111.001.00-1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................CTGGCTGTAGAGTAGGAAGATC.................................................................................................................................................................................................................................................2211.001.001.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGA.......................1911.001.00--1.00-------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGTGCTGTACATTGATA.....................2211.002.00----1.00-----------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTGCTGTACATTGAC......................1811.001.00--1.00-------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................GCCTCTGGAGACACCCGGCCGCTCTT..................................................................................................................................................................................................2611.001.00-1.00--------------------------------------------------------------------------
....................TATCGTCTTGGCCATCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------------1.00------------------------------------
......................TCGTCTTGGCCATCCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------1.00---------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTG........................1811.001.00----------------------------------------------------------------1.00-----------
...........................................................................................................................................................TGGCTAGGATGTGCTCG..................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00----------------------------------------------1.00-----------------------------
.............................................................................................................................................................................................................................................................................................................GTAGAGTAGGAAGATCG................................................................................................................................................................................................................................................1711.001.00---------------------------1.00------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................AGAGATACCTGAGGGAGGCAGCCAGCCCG...............................................................................................................................2911.001.00-----------1.00----------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................GATACCTGAGGGAGGCAGCCA....................................................................................................................................2111.001.00------------------------------------------------------------1.00---------------
................ATGATATCGTCTTGGCCATCCTGGAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00----------------------1.00-----------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGAAA.....................2111.001.00------1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGATACCTGAGGGAGG..........................................................................................................................................1911.001.00------------------------------------------------------------------1.00---------
...........................................................................................................................................................TGGCTAGGATGTGCTCGGTG...............................................................................................................................................................................................................................................................................................................................................................................................2011.001.001.00---------------------------------------------------------------------------
...........CGTCAATGATATCGTCTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--1.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................TTGACCCTGGCTGTAGAGTAGGAAGATC.................................................................................................................................................................................................................................................2811.001.00----------------------------------------------------1.00-----------------------
...............AATGATATCGTCTTGGCCATCCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00--------------------------------------------------------------1.00-------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCGCCCTTGGCACTGCG...............................................................................................191.000.00-------------1.00--------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................CCTGGCTGTAGAGTAGGAAGA...................................................................................................................................................................................................................................................2111.001.00------------------------------------------------1.00---------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGAC......................2011.001.001.00---------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGTGCTGTACATTGAAATT...................2411.002.00-1.00--------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................AGGAAGATCGGACTTGGT........................................................................................................................................................................................................................................1811.001.00-------------------------------------------------------1.00--------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................GCTTAGAGATACCTGAGGG.............................................................................................................................................1911.001.00------------------------------------------------------1.00---------------------
.......................................................................................................................................................................................................................................................................................................CTGGCTGTAGAGTAGGAAGATCGGACTTG..........................................................................................................................................................................................................................................2911.001.00------------------1.00---------------------------------------------------------
...................ATATCGTCTTGGCCATCCTGGAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................251.000.00--------1.00-------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGTGCTGTACATTGACATTGATA...............2611.001.00----------1.00-----------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGACATTGAT................2611.001.00--------------------------------------------------------1.00-------------------
...................................................................................................................................................................................................CCTTGATGGGGTCTTGGTT........................................................................................................................................................................................................................................................................................................................................................1911.001.001.00---------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCCCGGTAAGCTGGGAGCTAGCG.............................................................................................................2611.001.00-----------------------------------------------1.00----------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGCCCCCAGACG........................................................................161.000.00-------1.00--------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAGGGTGCTGTACATTGA.......................2111.001.001.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTTT.......................191.000.00--1.00-------------------------------------------------------------------------
...................ATATCGTCTTGGCCATCCTGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------1.00--------------------------------------
..........................................................................................................................................................................................................................................................................................................................................TTGGTCAGGCCTCTGGAG..................................................................................................................................................................................................................1811.001.00-------------------------------------------------1.00--------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGTGCTGTACATTGACATCG..................241.000.00------------1.00---------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................AGGAAGATCGGACTTGGTCGGCTTG.................................................................................................................................................................................................................................2511.001.001.00---------------------------------------------------------------------------
......................................................................................................................................................TGTGCTGGCTAGGATGTG......................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------------------1.00---------------------------------------------------
....................................................................................................................................................................................................................................................................................................................AGGAAGATCGGACTTGA.........................................................................................................................................................................................................................................1720.500.50---------------------------0.50------------------------------------------------
....................................................................................................................................................................................................................................................................................................................AGGAAGATCGGACTTG..........................................................................................................................................................................................................................................1620.500.50-------------------------------------------------------------------------0.50--
.....................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGGTGCTTAGA.........................................................................................................................................................1620.500.50------------------------------------------------------------------------0.50---
.....................................................................................................................................................................................................................................................................................................................................................................................................................GATACCTGAGGGAGGC.........................................................................................................................................1620.500.50--------------------------------------------------------------------------0.50-
.................................ATCCTGGAACTGCTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1630.330.33------------------------------------------------------------------------0.33---
....................................CTGGAACTGCTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1540.250.25---------------------------------------------------------------------------0.25

Antisense strand
GGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCTGGAACTGCTAAAGTATGCCTGCCTGGCCTTGTCTCTTGGAAGAGCACCTTAGGCCAGGTTCCCATTTCCCTCTTCCCCTGGGCTTGCCTCCCTAGTTTGCTTTTCCTACCGATGTGCTGGCTAGGATGTGCTCGGTGAGTGTCTCTGGCCATCATCTCCTTGATGGGGTCTTGGTTTGATCTGAGCCACGGCATGATCAGGGGCAGATGCTGCTCAGATCCTGCCTCCAGAGTGTCCCTGTGTGGCTGGAGTTGACCCTGGCTGTAGAGTAGGAAGATCGGACTTGGTCGGCTTGGTCAGGCCTCTGGAGACACCCGGCCGCTCTTCCACCTTCCTTCAGCCAGTTTCCACGTCTCTGGTGCTTAGAGATACCTGAGGGAGGCAGCCAGCCCGGTAAGCTGGGAGCTAGCGCCCTTGGCACGTCCCATCCCCAAAGAGCCCCCAGACCCCTGACCCCCTTCTGATCCTAGGTATCACCAGAGGGTGCTGTACATTGACATTGATATTCACCATGGTGACG
.............................................................................................................................................................................................................((((((((((((((.(((((..((((.((((..((((((...)))))).)))).))))(((.((...(((((.((..(((((........)))))..)).))..)))...))))).......))))))))))))))....)))))................................................................................................................................................................................................................
.........................................................................................................................................................................................................202...................................................................................................................................................352............................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189787SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189784SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM359208(GSM359208)
hepg2_bindASP_hl_2. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR207117(GSM721079)
Whole cell RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR040010(GSM532895)
G529N. (cervix)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189782SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR038861(GSM458544)
MM466. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR038860(GSM458543)
MM426. (cell line)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
......................................................................................TTAGGCCAGGTTCCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 184.000.00---------------2.00-------1.00-----------------------------------------1.00----------
.......................................................................................................................................................................................................ATCAAACCAAGACCCCATC.................................................................................................................................................................................................................................................................................................................................................... 1912.002.00---------------------2.00------------------------------------------------------
...............................................................................GAGCACCTTAGGCCACCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 191.000.00---------------------------------------------------------1.00------------------
............................................................................................CAGGTTCCCATTTCCCTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 201.000.00--------------1.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGACATTGATAGAAG........... 191.000.00--------------------------------------------------1.00-------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCCGGTAAGCTGGGACTTT................................................................................................................ 221.000.00-----------1.00----------------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTACCGGGCTGGCTGCCTCCCTC........................................................................................................................ 2611.001.00------------1.00---------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................CTTCCTTCAGCCAGTTCAC........................................................................................................................................................................... 191.000.00---------------------------------------------1.00------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAGGATCAGAAGGGGGT................................................. 1911.001.00------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCCAAAGAGCCCCTCAT.......................................................................... 201.000.00-------------1.00--------------------------------------------------------------
........................GTCTTGGCCATCCTGGATGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 211.000.00---------------------------------------------------1.00------------------------
..............................................................................................GGTTCCCATTTCCCTGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 191.000.00--------------1.00-------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................TTCCTTCAGCCAGTTTCC........................................................................................................................................................................... 181.000.00------------1.00---------------------------------------------------------------
.....................................................................................................................................................................................................................................................................CCTCCAGAGTGTCCCTGC....................................................................................................................................................................................................................................................................................... 181.000.00-------1.00--------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCTGTACATTGATTGG................... 191.000.00-----------1.00----------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................CGGCCGCTCTTCCACCTTCCTTCAC.................................................................................................................................................................................... 251.000.00----------------------1.00-----------------------------------------------------