ID: uc010nzg.1_intron_0_0_chr1_2980867_r.3p
GENE: FLJ42875(1)
chr1:2980817-2981066-


(1)
BRAIN 		(4)
BREAST 		(8)
CELL-LINE 		(5)
CERVIX 		(3)
HEART 		(2)
OTHER 		(11)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
GTCCCTTGCAGATGGGCAGCTTCCGGGGACCGGCTTGCACGATGCCGTGGCCACCCCAGTGGAGACCCTCTGCCCGGCTTTGTGTCCTGGCGTCCCCACCAGGGTGCCCAGCTCTCCTGCGCAGATGTCGGGAGTATCTGGATGCCCCATGGGCACTTCGAGGGCCCAATCCGGAGTTTTTTGTTTTGTTTTGTTTTAAGAGATTGAGACTGTGAACCTGAACTCCCTTGATCTCCTCCCGTTGGGCCCA
...................................................................................(((((((.((.((((...((((..((((..((((((.((....))))))))...))))..))))..)))).)).)).))))).(((..(((((.......)))))..))).........................................................
.............................................................................78........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM532890(GSM532890)
G576T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR343337SRR343334SRR343335SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCTGG..................................................2618.000.0017.001.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTTCGG..................................................2615.000.0012.003.00-------------------------------------
...............................GGCTTGCACGATGCCCC..........................................................................................................................................................................................................178.000.00--1.00--------1.00--1.00---1.00--1.00-1.001.00--------1.00-----
..................................................................................................................................................................................................................TGTGAACCTGAACTCTG.......................176.000.00-----2.001.00-1.00-1.00---------------------1.00------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTTCGGT.................................................273.000.001.002.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCA....................................................243.000.00-3.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCCGG..................................................263.000.00-3.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCTCT..................................................263.000.003.00--------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCTC...................................................253.000.00-3.00-------------------------------------
...........................................................................................................................................................................................................TTGAGACTGTGAACCTG..............................1712.002.00----2.00----------------------------------
...................................................................................................................................................................................................TTAAGAGATTGAGACTGTGAACCTGAACTC.........................3012.002.00--2.00------------------------------------
.............GGGCAGCTTCCGGGGAACCA.........................................................................................................................................................................................................................202.000.00-------1.00-----1.00-------------------------
....................................................................................................................................................................................................TAAGAGATTGAGACTGTGAACCTG..............................2412.002.00----1.001.00---------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTCTTC...................................................252.000.001.001.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCGAG..................................................262.000.002.00--------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCC....................................................242.000.001.001.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTTCTGG.................................................272.000.001.001.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTCTAC...................................................252.000.002.00--------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCGC...................................................252.000.001.001.00-------------------------------------
..............GGCAGCTTCCGGGGAACC..........................................................................................................................................................................................................................182.000.00-----------------1.00---------1.00-----------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTCGAG...................................................252.000.001.001.00-------------------------------------
........................................................................................................................................................................................................AGATTGAGACTGTGAACCT...............................1911.001.00---1.00-----------------------------------
................................................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTAACCG................................................261.000.001.00--------------------------------------
..............GGCAGCTTCCGGGGAACCA.........................................................................................................................................................................................................................191.000.00-------1.00-------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCGG...................................................251.000.001.00--------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTCC.....................................................231.000.00-1.00-------------------------------------
.............................................................................................................................................................................GAGTTTTTTGTTTTGTTTTGTTTCTGG..................................................271.000.00-1.00-------------------------------------
..................................................................................TGTCCTGGCGTCCCCACCCTCC..................................................................................................................................................221.000.00-1.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTTATTG.................................................271.000.00-1.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTTACTTC................................................281.000.001.00--------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTCCG....................................................241.000.00-1.00-------------------------------------
.................................................................................................................................................................................................TTTTAAGAGATTGAGACTGTGAACCTGCA............................291.000.00--1.00------------------------------------
.............GGGCAGCTTCCGGGGGGGA..........................................................................................................................................................................................................................191.000.00--------------------1.00------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCGTC..................................................261.000.001.00--------------------------------------
................................................................................................................................................................................TTTTTTGTTTTGTTTTGTTGCTG...................................................231.000.00-1.00-------------------------------------
.............GGGCAGCTTCCGGGGAACC..........................................................................................................................................................................................................................191.000.00-------------------1.00-------------------
.....................................................................................................................................................................................................AAGAGATTGAGACTGTGAACCTGAACTCC........................2911.001.00---1.00-----------------------------------
........................................................................................................................................................................................................AGATTGAGACTGTGAACCTGAACTCC........................2611.001.00--1.00------------------------------------
...............................................................................................................................................................................................TGTTTTAAGAGATTGAGACTGTGAACCTG..............................2911.001.00---------1.00-----------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTCCGC...................................................251.000.001.00--------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTCGAT...................................................251.000.00-1.00-------------------------------------
...............................GGCTTGCACGATGCCC...........................................................................................................................................................................................................161.000.00----------------------------1.00----------
.................................................................................................................................................................................................................CTGTGAACCTGAACTCTG.......................181.000.00------1.00--------------------------------
.............................................................................................................................................................TCGAGGGCCCAATCCGGAG..........................................................................1911.001.00--------------------------1.00------------
..............GGCAGCTTCCGGGGATA...........................................................................................................................................................................................................................171.000.00------------------------------1.00--------
................CAGCTTCCGGGGACCGGCGCA.....................................................................................................................................................................................................................211.000.00-----------------------------1.00---------
...............................................................................................................................................................................GTTTTTTGTTTTGTTTTGTTGCTG...................................................241.000.00-1.00-------------------------------------
..........................................................GTGGAGACCCTCTGCCCGGC............................................................................................................................................................................2011.001.00---1.00-----------------------------------
.........................................................................................................................................................................................................GATTGAGACTGTGAACCTGAACTCCCT......................2711.001.00---1.00-----------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCTGC..................................................261.000.001.00--------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTCTTT...................................................251.000.00-1.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTTCGAC.................................................271.000.00-1.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTTCTCC..................................................261.000.00-1.00-------------------------------------
..............................................................................................................................................................................AGTTTTTTGTTTTGTTTTGTTGGT....................................................241.000.001.00--------------------------------------
.........................................................................................................................................................................TCCGGAGTTTTTTGTTTTGTTTTGTC.......................................................261.000.00-1.00-------------------------------------
...............................................................................................................................................................................GTTTTTTGTTTTGTTTTGTTTTCCGC.................................................261.000.001.00--------------------------------------
...............................GGCTTGCACGATGCCCCG.........................................................................................................................................................................................................181.000.00-------------------------------1.00-------
............TGGGCAGCTTCCGGG...............................................................................................................................................................................................................................1590.220.22-------------------------------------0.110.11
...........................................................................................................................................................................................................TTGAGACTGTGAACC................................1570.140.14--------0.14------------------------------

Antisense strand
GTCCCTTGCAGATGGGCAGCTTCCGGGGACCGGCTTGCACGATGCCGTGGCCACCCCAGTGGAGACCCTCTGCCCGGCTTTGTGTCCTGGCGTCCCCACCAGGGTGCCCAGCTCTCCTGCGCAGATGTCGGGAGTATCTGGATGCCCCATGGGCACTTCGAGGGCCCAATCCGGAGTTTTTTGTTTTGTTTTGTTTTAAGAGATTGAGACTGTGAACCTGAACTCCCTTGATCTCCTCCCGTTGGGCCCA
...................................................................................(((((((.((.((((...((((..((((..((((((.((....))))))))...))))..))))..)))).)).)).))))).(((..(((((.......)))))..))).........................................................
.............................................................................78........................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR040008(GSM532893)
G727N. (cervix)		GSM532890(GSM532890)
G576T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR343337SRR343334SRR343335SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................................................................................................................TGATCTCCTCCCGTTCCA.... 181.000.00------------1.00--------------------------
..........................................................................................................CCCAGCTCTCCTGCGGCT.............................................................................................................................. 181.000.00----------------1.00----------------------
.................................................................CCCTCTGCCCGGCTTGAAC...................................................................................................................................................................... 191.000.001.00--------------------------------------
..................................................................CCTCTGCCCGGCTTTGTCA..................................................................................................................................................................... 191.000.00---------------1.00-----------------------
...........................................................TGGAGACCCTCTGCCCGT............................................................................................................................................................................. 181.000.00----------------------1.00----------------
.......................................................................................................GTGCCCAGCTCTCCTGATGG............................................................................................................................... 201.000.00-------------------------1.00-------------
.......................................................................................CTGGTGGGGACGCCA.................................................................................................................................................... 1541.001.00----------------------------------0.500.250.25--