ID: uc010nwx.1_intron_4_0_chrY_15411025_r.5p
GENE: (8)
chrY:15414557-15414806-


(1)
AGO2.ip
(1)
BRAIN
(1)
BREAST
(8)
CELL-LINE
(1)
CERVIX
(7)
HEART
(2)
LIVER
(1)
OTHER
(14)
SKIN

Sense strand
TTTGTTGTACCTGAAGATTATTGGGGTGTTCTGAATGACTTCTGTGAAAAGTAGGTTTCTGAACTAAACTTTCATTTAAGTAACTATGAGAAAATAGGCATAAAGGACAAAGTGCAAAGCTGAGTTTCTTCATGAAACTATCAGTTTTTACTTACTGCTCAGCAGAATTTTTTTAAAATGATTTGATTTCAAATCTTTTATGTTATCTAAATACTTAATGAAAAGATGTCATGCTAAGCACAGTGTCTTA
.....................................................(((((.((.(((..((((......))))..((((......)))).............))).))))))).................................................................................................................................
..................................................51...............................................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
..................................................GTAGGTTTCTGAACTCTG......................................................................................................................................................................................1855.000.0019.007.004.003.003.003.003.002.001.00--2.00-1.00-1.00-1.00----1.00--1.001.001.00-1.00-------
.................................................AGTAGGTTTCTGAACTCTG......................................................................................................................................................................................192.000.001.00-------1.00----------------------------
.................................AATGACTTCTGTGAAAA........................................................................................................................................................................................................1781.251.25------------1.25------------------------
............GAAGATTATTGGGGTGTTCTGAA.......................................................................................................................................................................................................................2311.001.00---------------------1.00---------------
...................ATTGGGGTGTTCTGAATGAA...................................................................................................................................................................................................................201.000.00------------------1.00------------------
...........................................................................................................CAAAGTGCAAAGCTGAGTTAG..........................................................................................................................211.000.00------------------------1.00------------
......................................................................................................AAGGACAAAGTGCAAAGCTGAGT.............................................................................................................................2311.001.00-----------------------1.00-------------
..................................................GTAGGTTTCTGAACTCGG......................................................................................................................................................................................181.000.00---1.00---------------------------------
..................................................................................................................................................................CAGAATTTTTTTAAAATGCG....................................................................201.000.00------------------------------1.00------
...............................................................................................AGGCATAAAGGACAAAGTGCAA.....................................................................................................................................2211.001.00--------------1.00----------------------
..............................................................................AGTAACTATGAGAAAGACT.........................................................................................................................................................191.000.00--------------------1.00----------------
..................................ATGACTTCTGTGAAAAGTAGG...................................................................................................................................................................................................2120.500.50----------------------------------0.50--
...............................................................................................AGGCATAAAGGACAAAG..........................................................................................................................................1720.500.50--------------------------------0.50----
......................GGGGTGTTCTGAATGACTTCTGTG............................................................................................................................................................................................................2420.500.50---------------------------------0.50---
..............................................................................................TAGGCATAAAGGACAAAG..........................................................................................................................................1820.500.50-----------------------------------0.50-
......................GGGGTGTTCTGAATGA....................................................................................................................................................................................................................1620.500.50-------------------------------0.50-----
.............AAGATTATTGGGGTG..............................................................................................................................................................................................................................1540.250.25------------------------------------0.25

Antisense strand
TTTGTTGTACCTGAAGATTATTGGGGTGTTCTGAATGACTTCTGTGAAAAGTAGGTTTCTGAACTAAACTTTCATTTAAGTAACTATGAGAAAATAGGCATAAAGGACAAAGTGCAAAGCTGAGTTTCTTCATGAAACTATCAGTTTTTACTTACTGCTCAGCAGAATTTTTTTAAAATGATTTGATTTCAAATCTTTTATGTTATCTAAATACTTAATGAAAAGATGTCATGCTAAGCACAGTGTCTTA
.....................................................(((((.((.(((..((((......))))..((((......)))).............))).))))))).................................................................................................................................
..................................................51...............................................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
......................................................................................................................................................................ATTTTTTTAAAATGATTAACG............................................................... 212.000.00----------1.00-----1.00--------------------
......................................................................................................................................................................ATTTTTTTAAAATGATAACG................................................................ 201.000.00----------1.00--------------------------
................................................................................................................................................TTTTTACTTACTGCTCTTG....................................................................................... 191.000.00-------------------1.00-----------------
...........................................................................................................................GTTTCTTCATGAAACACC............................................................................................................. 181.000.00----------------------------1.00--------