ID: uc010nqe.2_intron_10_0_chrX_114398347_r.3p
GENE: (10)
chrX:114398297-114398546-


(2)
B-CELL
(12)
BRAIN
(1)
BREAST
(5)
CELL-LINE
(1)
CERVIX
(6)
HEART
(2)
LIVER
(2)
OTHER
(4)
SKIN
(1)
XRN.ip

Sense strand
TACAGCCAGTATGCTACATTTCATAATGAGTAGAGAACACAGAAGTTTTCCTTATTTCTTATTTTAGCATTTTAAAAGAAGGACCTAGGATTTTAACTTTCATATGGTGTTAAAAACAAAAATGGTTTCTATTTCTGGAAGCTGGCATAAAATGTAGTCTGCCTTACTTTTTGGATAACCATGTTTGTGTCACCTTTCAGACTTGAGAAAGAACAGTTACTGGCAGAGGAAGAGGATGATGATTTGAAGG
......................................................................................................................................(((((((.(((((((((..((.((((............)))).))....))))))))).)))))))..................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343334SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040038(GSM532923)
G531N. (cervix)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
...................................................................................................................................................................................CATGTTTGTGTCACCTTTCAG..................................................2118.008.008.00-----------------------------------------
.......................................................................................................................................TGGAAGCTGGCATAAAATGTAGT............................................................................................2318.008.00----2.00-----1.001.00------1.00---------------1.00---1.00-1.00-
..............................................................................................................................................................................................CACCTTTCAGACTTGAATG.........................................197.000.00--3.002.00----2.00---------------------------------
.......................................................................................................................................TGGAAGCTGGCATAAAATGTAG.............................................................................................2216.006.00-1.00-----1.00--------1.00---------------1.00--1.00---1.00--
.....................................................................................................................................TCTGGAAGCTGGCATAAAATGT...............................................................................................2216.006.00-1.00----------2.00--1.00--------------------1.001.00----
...........................................................................................................................................AGCTGGCATAAAATGTAGATTT.........................................................................................224.000.00-1.00----1.00----1.00---------1.00--------------------
.............................................................................................................................................CTGGCATAAAATGTAGATTT.........................................................................................203.000.00-1.00-----1.00---------------------1.00------------
...................................................................................................................................................................................CATGTTTGTGTCACCTTTCAGT.................................................2213.008.001.00-------------1.00-------1.00-------------------
.....................................................................................................................................TCTGGAAGCTGGCATAAAATGA...............................................................................................222.000.00---------2.00--------------------------------
..................................................................................................................................................................................CCATGTTTGTGTCACCTTTCAGT.................................................231.000.00--------------------------1.00---------------
...............................................................................................................................................GGCATAAAATGTAGTACCG........................................................................................191.000.00-----------------------1.00------------------
.......................................................................TTAAAAGAAGGACCTAGGATTTTAA..........................................................................................................................................................2511.001.00-------------------------------1.00----------
......................................................................................................................................................................................................................AGTTACTGGCAGAGGAAGAGGATGATGATTTGAA..3411.001.00-----1.00------------------------------------
......................................................................................................................................CTGGAAGCTGGCATAAAATGTAG.............................................................................................2311.001.00-----1.00------------------------------------
...........................................................................................................................................AGCTGGCATAAAATGTAGAGAT.........................................................................................221.000.00----1.00-------------------------------------
.......................................................................................................................................TGGAAGCTGGCATAAAATA................................................................................................191.000.001.00-----------------------------------------
...........................................................................................................................................................................................................................CTGGCAGAGGAAGAGGATGAT..........2111.001.00--------------------1.00---------------------
..................................................................................................................................ATTTCTGGAAGCTGGCATAAAATG................................................................................................2411.001.00---------------------------------1.00--------
...............................................TTCCTTATTTCTTATTCAG........................................................................................................................................................................................191.000.00-------------1.00----------------------------
...................................................................................................................................................................................CATGTTTGTGTCACCTTTCATT.................................................221.000.001.00-----------------------------------------
..............................................................................................................................................................................................CACCTTTCAGACTTGAATA.........................................191.000.00---1.00--------------------------------------
....................................................................................................................................TTCTGGAAGCTGGCATAAAATGT...............................................................................................2311.001.00-1.00----------------------------------------
...........................................................................................................................................AGCTGGCATAAAATGTAGGTTT.........................................................................................221.000.00------1.00-----------------------------------
..........................................................................................................................................................................................................TTGAGAAAGAACAGTTACTTGCA.........................231.000.00-------------------------1.00----------------
..........................TGAGTAGAGAACACAGAAGTTTCC........................................................................................................................................................................................................241.000.00----------------------------1.00-------------
....................................................................................................................................................AAAATGTAGTCTGCCTTGA...................................................................................191.000.00------------------------------1.00-----------
..........................................AAGTTTTCCTTATTTGACC.............................................................................................................................................................................................191.000.00------------------------1.00-----------------
................................................................................................................................................................................................................................AGAGGAAGAGGATGATGATTT.....2111.001.00-----------------1.00------------------------
.............................................................................................................................TTTCTATTTCTGGAAGAGAC.........................................................................................................201.000.00-------------------1.00----------------------
.....................................................................................................................................TCTGGAAGCTGGCATAAAATGCAGT............................................................................................251.000.00----------1.00-------------------------------
................................................................................................................................................................................................................................AGAGGAAGAGGATGATGA........1840.250.25-----------------------------------------0.25

Antisense strand
TACAGCCAGTATGCTACATTTCATAATGAGTAGAGAACACAGAAGTTTTCCTTATTTCTTATTTTAGCATTTTAAAAGAAGGACCTAGGATTTTAACTTTCATATGGTGTTAAAAACAAAAATGGTTTCTATTTCTGGAAGCTGGCATAAAATGTAGTCTGCCTTACTTTTTGGATAACCATGTTTGTGTCACCTTTCAGACTTGAGAAAGAACAGTTACTGGCAGAGGAAGAGGATGATGATTTGAAGG
......................................................................................................................................(((((((.(((((((((..((.((((............)))).))....))))))))).)))))))..................................................
..................................................................................................................................131..................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343334SRR189784GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR343335SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189787SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR189785SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577741(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040038(GSM532923)
G531N. (cervix)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
................................................................................................CTTTCATATGGTGTTACG........................................................................................................................................ 181.000.00---------------------------1.00--------------
.....................................................................................................ATATGGTGTTAAAAAACT................................................................................................................................... 181.000.00-------------1.00----------------------------