ID: uc010nln.2_intron_1_0_chrX_72093532_r.3p
GENE: (3)
chrX:72093482-72093731-


(1)
AGO2.ip
(1)
B-CELL
(8)
BRAIN
(7)
BREAST
(7)
CELL-LINE
(11)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(3)
LIVER
(4)
OTHER
(2)
SKIN
(3)
UTERUS
(1)
XRN.ip

Sense strand
TCTACTGCAGCCACAGGTCCTGGGAAAGTAGTGGGGTCCAGAACCCTGGGAGGGGCGGAGTTTAGTGGATGGGAAGAGCAGAAGGCCTTGGTGGGGGTGGGGGAGGAGGTTGAGGGAACAGGGGGCTGAAGGGGCACTTGTCGTATTGGGAAGAGGTGTAGTTTCCCAGTGCCTATTCTCTCATGCACTTTCCTTTCCAGGTCCCCAAAGTCTCTGACCAGGCTTTGGTTTCTGCCCACTCAGAGTGGCA
...........................................................((((............)))).....((((......))))........................................................................................................................................................
.........................................................58...........................................................119.................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040018(GSM532903)
G701N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577580(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040022(GSM532907)
G575N. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR040006(GSM532891)
G601N. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189783RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040008(GSM532893)
G727N. (cervix)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577590(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
.................................................................................................TGGGGGAGGAGGTTGTAT.......................................................................................................................................1819.000.001.002.001.002.00-1.003.001.001.00-1.001.00--------1.00-------1.00----1.00----------1.00-1.00-
.................................................................................................TGGGGGAGGAGGTTGTATA......................................................................................................................................1910.000.00-1.00-1.001.00---1.001.00--1.001.00---1.00---1.00-------------------------1.00
.................................................................................................TGGGGGAGGAGGTTGTGTG......................................................................................................................................198.000.00--2.001.00-1.00----------1.00-1.00----1.00--------1.00---------------
.................................................................................................TGGGGGAGGAGGTTGTTT.......................................................................................................................................185.000.00--1.00-1.00----1.001.00---------1.00---------------------------
.................................................................................................TGGGGGAGGAGGTTGAATAG.....................................................................................................................................204.000.00-----1.00-----1.00-------------1.00-1.00--------------------
.................................................................................................TGGGGGAGGAGGTTGTAA.......................................................................................................................................183.000.00--1.00----------1.001.00---------------------------------
.................................................................................................TGGGGGAGGAGGTTGTATG......................................................................................................................................193.000.002.00------1.00----------------------------------------
.................................................................................................TGGGGGAGGAGGTTGTGTA......................................................................................................................................192.000.00--------1.00---------------------------------1.00-----
.................................................................................................TGGGGGAGGAGGTTGTGCA......................................................................................................................................192.000.00----1.00---------1.00---------------------------------
......................GGAAAGTAGTGGGGTAAC..................................................................................................................................................................................................................181.000.00-1.00----------------------------------------------
..TACTGCAGCCACAGGACC......................................................................................................................................................................................................................................181.000.00-------------------------------1.00----------------
.................................................................................................TGGGGGAGGAGGTTGAATA......................................................................................................................................191.000.00-----------------------1.00------------------------
.................................................................................................TGGGGGAGGAGGTTGAGGGGGTT..................................................................................................................................231.000.00-----------------------------------1.00------------
.................................................................................................TGGGGGAGGAGGTTGAATGG.....................................................................................................................................201.000.00---1.00--------------------------------------------
.................................................................................................TGGGGGAGGAGGTTGAAC.......................................................................................................................................181.000.00-----------------------------1.00------------------
.................................................................................................TGGGGGAGGAGGTTGAAGAA.....................................................................................................................................201.000.00----------------------1.00-------------------------
.................................................................................................TGGGGGAGGAGGTTGATGGG.....................................................................................................................................201.000.00---------1.00--------------------------------------
.................................................................................................TGGGGGAGGAGGTTGTAGC......................................................................................................................................191.000.00-------1.00----------------------------------------
.................................................................................................TGGGGGAGGAGGTTGCG........................................................................................................................................171.000.00---------------------------------------1.00--------
.................................................................................................TGGGGGAGGAGGTTGAAAG......................................................................................................................................191.000.00----------------------1.00-------------------------
..................................................................................................GGGGGAGGAGGTTGAGGGGGTT..................................................................................................................................221.000.00------------------------------------1.00-----------
.................................................................................................TGGGGGAGGAGGTTGTGAA......................................................................................................................................191.000.00--1.00---------------------------------------------
.................................................................................................TGGGGGAGGAGGTTGAGCTGT....................................................................................................................................211.000.00--------------------------1.00---------------------
..............................................................TAGTGGATGGGAAGAAGG..........................................................................................................................................................................181.000.00---------------------------------------------1.00--
.................................................................................................TGGGGGAGGAGGTTGTTTT......................................................................................................................................191.000.00-----------------1.00------------------------------
.........................................................................................................................................................AGGTGTAGTTTCCCACCT...............................................................................181.000.00--------------------------------------1.00---------
.................................................................................................TGGGGGAGGAGGTTGCAAA......................................................................................................................................191.000.00------------1.00-----------------------------------
..................................................................................................GGGGGAGGAGGTTGAATGG.....................................................................................................................................191.000.001.00-----------------------------------------------
..................................................................................................GGGGGAGGAGGTTGAATAA.....................................................................................................................................191.000.001.00-----------------------------------------------
.................................................................................................TGGGGGAGGAGGTTGTAAA......................................................................................................................................191.000.00----------1.00-------------------------------------
.................................................................................................TGGGGGAGGAGGTTGTTTG......................................................................................................................................191.000.00-------------------------------------1.00----------
.................................................................................................TGGGGGAGGAGGTTGTTAT......................................................................................................................................191.000.00------------------1.00-----------------------------
....................................................................................................................................................................................TCATGCACTTTCCTTTCAAT..................................................201.000.001.00-----------------------------------------------
................................................................................................GTGGGGGAGGAGGTTGAATAG.....................................................................................................................................211.000.001.00-----------------------------------------------
.................................................................................................TGGGGGAGGAGGTTGTTTA......................................................................................................................................191.000.00-------------------1.00----------------------------
.................................................................................................TGGGGGAGGAGGTTGTAC.......................................................................................................................................181.000.00---------------------1.00--------------------------
.................................................................TGGATGGGAAGAGCAGGGGT.....................................................................................................................................................................201.000.00----------------1.00-------------------------------
.................................................................................................TGGGGGAGGAGGTTGTAGT......................................................................................................................................191.000.00-1.00----------------------------------------------
.................................................................................................TGGGGGAGGAGGTTGAACAG.....................................................................................................................................201.000.00----------------------------------1.00-------------
.................................................................................................TGGGGGAGGAGGTTGATTTT.....................................................................................................................................201.000.00-------------------1.00----------------------------
.................................................................................................TGGGGGAGGAGGTTGTGC.......................................................................................................................................181.000.00----------------------------------------1.00-------
.....................................................................................................................ACAGGGGGCTGAAGGGATA..................................................................................................................191.000.00-1.00----------------------------------------------
.......................................AGAACCCTGGGAGGGG...................................................................................................................................................................................................1680.120.12-------------------------0.12----------------------

Antisense strand
TCTACTGCAGCCACAGGTCCTGGGAAAGTAGTGGGGTCCAGAACCCTGGGAGGGGCGGAGTTTAGTGGATGGGAAGAGCAGAAGGCCTTGGTGGGGGTGGGGGAGGAGGTTGAGGGAACAGGGGGCTGAAGGGGCACTTGTCGTATTGGGAAGAGGTGTAGTTTCCCAGTGCCTATTCTCTCATGCACTTTCCTTTCCAGGTCCCCAAAGTCTCTGACCAGGCTTTGGTTTCTGCCCACTCAGAGTGGCA
...........................................................((((............)))).....((((......))))........................................................................................................................................................
.........................................................58...........................................................119.................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040024(GSM532909)
G613N. (cervix)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040018(GSM532903)
G701N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577742(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR189784SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577580(Rovira)
total RNA. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR040029(GSM532914)
G026T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040022(GSM532907)
G575N. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR040006(GSM532891)
G601N. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189783RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR040008(GSM532893)
G727N. (cervix)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577590(Rovira)
total RNA. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR040012(GSM532897)
G648N. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577743(Rovira)
total RNA. (breast)
........................................................................................................................................................................................................GTCCCCAAAGTCTCTGT................................. 172.000.00------------------------2.00-----------------------
................................................................................................................................................................GTTTCCCAGTGCCTATG......................................................................... 171.000.00-----------------------------------------1.00------
...............................................................................................................................................................AGTTTCCCAGTGCCTCTG......................................................................... 181.000.00---------------1.00--------------------------------
...............................................................................................................................................................AGTTTCCCAGTGCCTATTTG....................................................................... 201.000.00------------------------------1.00-----------------
...............................................................................................................................................................AGTTTCCCAGTGCCTACTG........................................................................ 191.000.00-------------------------------------------1.00----
..................................................................................AGGCCTTGGTGGGGGGCAG..................................................................................................................................................... 191.000.00---------------1.00--------------------------------