ID: uc010nll.2_intron_0_0_chrX_71801026_r.5p
GENE: (3)
chrX:71802048-71802297-


(1)
BREAST
(9)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
OTHER
(4)
SKIN
(1)
UTERUS

Sense strand
CTGTGGAAAAAATAGTGCATATTGCCAATGACTTGTTCCTTCAAGAACAGGTAGGCAAACCTGTTGTTTTCTCAATAGAGAAATGTTTTTACTCCAACCTGATGACATTCAGAGGTCTTTGAGGAGCCACGGTCACTTTCTTGTGCCCTCTTCCTCATACTTCTTTTTTGGGCCCCCTTTGTAGCGGCTCTGAGCTCTGTTTGCAAAAGAAGTAGGCCGCAGGAAGACCTCTGTCTTTCACCATGTGTTT
.................................................................................................................(((((.(((((((....((.(((......)))))...)))))))............)))))............................................................................
.................................................................................................................114............................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
..........................................................................................................................................................TCATACTTCTTTTTTTTTG.............................................................................19186.000.0070.0063.0029.0022.002.00-----------------
..........................................................................................................................................................TCATACTTCTTTTTTTTAG.............................................................................1923.000.002.002.0010.009.00------------------
..........................................................................................................................................................TCATACTTCTTTTTTTG...............................................................................1715.000.001.003.004.006.001.00-----------------
..........................................................................................................................................................TCATACTTCTTTTTTTCTG.............................................................................194.000.00---4.00------------------
..........................................................................................................................................................TCATACTTCTTTTTTTCG..............................................................................183.000.00--3.00-------------------
........................................................................................................................................................................................................TTGCAAAAGAAGTAGGTA................................182.000.00-----2.00----------------
..........................................................................................................................................................TCATACTTCTTTTTTTTGG.............................................................................192.000.001.001.00--------------------
.......................................................................................................................................................TCCTCATACTTCTTTTTTTTTT.............................................................................222.000.00-------2.00--------------
..........................................................................................................................................................TCATACTTCTTTTTTTCAG.............................................................................191.000.00--1.00-------------------
..........................................................................................................................................................................................................................GCAGGAAGACCTCTGTGTGC............201.000.00-------------------1.00--
...........ATAGTGCATATTGCCAATGACT.........................................................................................................................................................................................................................2211.001.00-------------1.00--------
..........................................................................................................................................................TCATACTTCTTTTTTGGAG.............................................................................191.000.00--------1.00-------------
.........................................................................................................................................................................................................TGCAAAAGAAGTAGGTAGC..............................191.000.00------1.00---------------
......................................................................................................................TTGAGGAGCCACGGTCTAGT................................................................................................................201.000.00------1.00---------------
...................................................................................................................................................................................TGTAGCGGCTCTGAGAGGA....................................................191.000.00----------1.00-----------
..........................................................................................................................................................TCATACTTCTTTTTTTGGA.............................................................................191.000.00--------1.00-------------
....................................................................................................................................................................................GTAGCGGCTCTGAGCTCTG...................................................1911.001.00----------------1.00-----
........................................................................................................................................................................................................TTGCAAAAGAAGTAGGTAGC..............................201.000.00---------------1.00------
..........................................................................................................................................................TCATACTTCTTTTTTACTG.............................................................................191.000.00---1.00------------------
..........................................................................................................................................................TCATACTTCTTTTTTAC...............................................................................171.000.00--1.00-------------------
.........................................................................................................................................................CTCATACTTCTTTTTTTTTG.............................................................................201.000.00---1.00------------------
..........................................................................................................................................................TCATACTTCTTTTTTTATC.............................................................................191.000.001.00---------------------
..........................................................................................................................................................TCATACTTCTTTTTTG................................................................................1670.290.29--0.14-0.14-----------------
..........................................................................................................................................................TCATACTTCTTTTTTGTTG.............................................................................1970.140.290.14---------------------

Antisense strand
CTGTGGAAAAAATAGTGCATATTGCCAATGACTTGTTCCTTCAAGAACAGGTAGGCAAACCTGTTGTTTTCTCAATAGAGAAATGTTTTTACTCCAACCTGATGACATTCAGAGGTCTTTGAGGAGCCACGGTCACTTTCTTGTGCCCTCTTCCTCATACTTCTTTTTTGGGCCCCCTTTGTAGCGGCTCTGAGCTCTGTTTGCAAAAGAAGTAGGCCGCAGGAAGACCTCTGTCTTTCACCATGTGTTT
.................................................................................................................(((((.(((((((....((.(((......)))))...)))))))............)))))............................................................................
.................................................................................................................114............................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577580(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
........................................................................................................................................TTTCTTGTGCCCTCTTAAAA.............................................................................................. 201.000.00------------------1.00---
................................................................................................................................................AGTATGAGGAAGAGGGC......................................................................................... 1721.001.00--------------------0.500.50
.....................................................................................................................................................................TTTTGGGCCCCCTTTGGCGG................................................................. 201.000.00---------1.00------------
................................................................................................................................................CCAAAAAAGAAGTATGAGGAAGAGGGC............................................................................... 2711.001.00-----------------1.00----
............................................................CTGTTGTTTTCTCAATTCT........................................................................................................................................................................... 191.000.00-----------1.00----------
................................................................................................................................................CCCAAAAAAGAAGTATGAGGAAGAGGGC.............................................................................. 2811.001.00------------1.00---------
...................................................................................................................................................................TTTTTTGGGCCCCCTTAA..................................................................... 181.000.00--------------1.00-------