ID: uc010nkx.1_intron_5_0_chrX_69646320_f
GENE: (6)
chrX:69646270-69646547+


(2)
B-CELL
(1)
BREAST
(5)
CELL-LINE
(1)
CERVIX
(7)
HEART
(1)
OTHER
(11)
SKIN
(1)
XRN.ip

Sense strand
TGGACATCCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTCACTGCAGGTGAGTGGCCAACCTCCAGTGTCTAGACGGGAGCCTTGGCTTGCAGCCAACCCTAGAACATATCTCGCTCCTGTTCCCCCAAGACTGCAGGTAGCTCTGAACTCCAGCAGTCAGGCCCTAAGAGGAAAGCGGGGAGGGGCACTGGAGAAGAGCCCACCTCACCAGCTCTTGTCCACAGGCCACAGCCCCATTCCTTCATATTGGAGCAGCCGCTGGAATTGCCCTCCT
...............................................................................................................................................(((((...((((((..(((...((((...........))))...))).)))))).)))))...........................................................................
......................................................................................................................................135...................................................................205.......................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...........................................................................................................................................GGTAGCTCTGAACTCTG..........................................................................................................................1750.000.0019.007.003.002.003.003.00-2.002.00-2.002.002.00-1.00-1.00---------1.00-
.........................................................................................................................................CAGGTAGCTCTGAACTCTG..........................................................................................................................198.000.003.00-1.001.00-----2.00-----1.00------------
..........................................................................................................................................AGGTAGCTCTGAACTCTG..........................................................................................................................182.000.00-1.00-----------1.00--------------
.......................................................................................................................................................................................GAGGGGCACTGGAGATAA.............................................................................181.000.00---------------------1.00------
.....................................................................TGTCTAGACGGGAGCAC................................................................................................................................................................................................171.000.00-----------------1.00----------
............................................................................................................................................GTAGCTCTGAACTCCG..........................................................................................................................161.000.00-----------------------1.00----
....................................................................................................................................................................................GGGGAGGGGCACTGGTGGT...............................................................................191.000.00-------------------1.00--------
..........ATGGCAGCAGGAGTGGCATAGCTTGCG.................................................................................................................................................................................................................................................2711.001.00------1.00---------------------
.......................................................................................................................................TGCAGGTAGCTCTGAACTCTG..........................................................................................................................211.000.001.00---------------------------
..........................................................................................................................................AGGTAGCTCTGAACTCCAGCAGTCAGGCC...............................................................................................................2911.001.00------1.00---------------------
.........................................................................................................................TGTTCCCCCAAGACTGCAGGTAGCTCTG.................................................................................................................................2811.001.00--------------------1.00-------

Antisense strand
TGGACATCCAATGGCAGCAGGAGTGGCATAGCTTGCGTGTGTCACTGCAGGTGAGTGGCCAACCTCCAGTGTCTAGACGGGAGCCTTGGCTTGCAGCCAACCCTAGAACATATCTCGCTCCTGTTCCCCCAAGACTGCAGGTAGCTCTGAACTCCAGCAGTCAGGCCCTAAGAGGAAAGCGGGGAGGGGCACTGGAGAAGAGCCCACCTCACCAGCTCTTGTCCACAGGCCACAGCCCCATTCCTTCATATTGGAGCAGCCGCTGGAATTGCCCTCCT
...............................................................................................................................................(((((...((((((..(((...((((...........))))...))).)))))).)))))...........................................................................
......................................................................................................................................135...................................................................205.......................................................................
SizePerfect hitTotal NormPerfect NormSRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.................................................................................................................................................................................................................CACCAGCTCTTGTCCACGCAG................................................ 211.000.00------------------------1.00---
....................................................................................................................................................................................................................................GCCACAGCCCCATTCCTT................................ 181.000.00------------------1.00---------
...........................................................................................................................................................................................................................................CCCCATTCCTTCATATTGC........................ 191.000.00----------------------1.00-----
............................................................................................................................................................................................................CACCTCACCAGCTCTCTGA....................................................... 191.000.00-------------------------1.00--
.......................................................................................................................GTCTTGGGGGAACAGG............................................................................................................................................... 1640.250.25---------------------------0.25
...............................................................GTCTAGACACTGGAG........................................................................................................................................................................................................ 1540.250.25------0.25---------------------