ID: uc010ney.1_intron_0_0_chrX_16804713_f.5p
GENE: (1)
chrX:16804663-16804912+


(3)
AGO2.ip
(1)
AGO3.ip
(16)
B-CELL
(3)
BRAIN
(6)
BREAST
(32)
CELL-LINE
(2)
CERVIX
(9)
HEART
(3)
HELA
(6)
LIVER
(2)
OTHER
(1)
RRP40.ip
(69)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
AGGCGACTGAGGCCGGACGGGGCGGACGGCGACGCAGCCCGCGGCAGAAGGTCAGTCAGGGGGACGCCCTCGTTGTTGTCGGGCCCGGGGGATGTTTGGGCTCCCTTTTTCAGGGTCCACCTCTTCTCTCTCCCTGGTTACCTATAGCCACGGGACGAACATCCGGTCTTCTTCCCTCCCGGGGGTGACGACAGTGGGAGCAGGTGGGGGGGGGTGGGACCGCGATGGATGGGGTGGGAAGGGACGACGG
.........................................................................((((...((((((((((((.((....)))))))).....))))))............((((((((((....)))))).))))..)))).........................................................................................
.......................................................................72.............................................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
TAX577588(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
GSM359175(GSM359175)
hela_5_pct. (hela)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR038863(GSM458546)
MM603. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM956925PAZD5SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................GTCGGGCCCGGGGGA..............................................................................................................................................................152149.50149.50-5.007.50-2.50-6.003.501.503.505.504.00-5.001.003.503.504.502.50-4.004.002.004.002.003.503.50----1.003.00---2.501.500.501.501.502.502.501.001.00---1.00-1.00---1.00--2.00--2.00--2.001.500.501.501.501.501.501.501.500.500.501.501.501.501.501.501.501.501.500.500.500.501.501.001.00-----1.00-1.00----------1.00--------1.00--1.00--1.00-----------------0.500.500.500.500.500.500.500.500.500.50---
...........GCCGGACGGGGCGGACGG.............................................................................................................................................................................................................................18119.0019.009.00----2.00-----------------------1.00---2.00----------------1.00-----1.00---------------------------------------------------------------1.00----1.00------1.00-------------------
............................................................................TGTCGGGCCCGGGGGAG.............................................................................................................................................................1719.001.00-2.00----------------------------3.00-------------1.00---------------------------------------------------1.00----------------1.00----------------1.00---------------------
...........GCCGGACGGGGCGGACGGC............................................................................................................................................................................................................................1915.005.004.00----------------------------------------------------1.00--------------------------------------------------------------------------------------------------
..GCGACTGAGGCCGGACGG......................................................................................................................................................................................................................................1815.005.00----------------------------------1.00---------------------1.00-----2.00-------------------------------------------------------------------------1.00---------------
............................................................................TGTCGGGCCCGGGGGAGG............................................................................................................................................................1815.001.00-----------1.00---1.00-----------------------------------------------------------------------------------1.00---1.00-------------------------1.00----------------------
.........AGGCCGGACGGGGCGGACG..............................................................................................................................................................................................................................1914.004.00-----------------------------1.00----1.00------------------------1.00------------------------------------------------1.00-------------------------------------------
...............................................................................CGGGCCCGGGGGATGTTC.........................................................................................................................................................183.000.00-----------------------------------------------------------------1.00-------1.00---------------1.00--------------------------------------------------------------
...CGACTGAGGCCGGACGGG.....................................................................................................................................................................................................................................1813.003.00---------------------------1.00------------------1.00------------------------------------------------------------------------1.00--------------------------------
............................................................................TGTCGGGCCCGGGGGAGGT...........................................................................................................................................................1913.001.00-------2.00-----------------------1.00------------------------------------------------------------------------------------------------------------------------
..GCGACTGAGGCCGGACGGGGC...................................................................................................................................................................................................................................2113.003.00-------------------1.00--------------------------------------1.00-------------------------------1.00-------------------------------------------------------------
............................................................................TGTCGGGCCCGGGGG...............................................................................................................................................................1532.332.33------0.33-----------------------------0.33------0.33--------------------0.330.33-------------------------------------------------------------------------0.33---------0.33--
...........................................................................TTGTCGGGCCCGGGG................................................................................................................................................................1512.002.00--------------2.00-----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................GCCACGGGACGAACATC.......................................................................................1712.002.00---2.00----------------------------------------------------------------------------------------------------------------------------------------------------
...CGACTGAGGCCGGACGGGGCGG.................................................................................................................................................................................................................................2212.002.00-----2.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................GTCGGGCCCGGGGGAAG............................................................................................................................................................1722.00149.50-2.00------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TCGGGCCCGGGGGATGTTT.........................................................................................................................................................1912.002.00-------------------------------------------------------------2.00------------------------------------------------------------------------------------------
..GCGACTGAGGCCGGACGGGGCGGA................................................................................................................................................................................................................................2412.002.00--------------------------------------------------------------------------------------------------------------1.001.00----------------------------------------
.................................................................................................................................................................................................................................TGGATGGGGTGGGAAGGGACA....212.000.00---2.00----------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................ATGGATGGGGTGGGAAGGG.......1912.002.00----1.00------------------------------------------------------------------------------------------------------------------------------1.00--------------------
........GAGGCCGGACGGGGCGGACGGCGACGCAGG....................................................................................................................................................................................................................301.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.............CGGACGGGGCGGACGGCGACG........................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------------------------------------------------------1.00-----------------------
............CCGGACGGGGCGGACGGCGAC.........................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------------------
......................................................................................................................................................................................................AGCAGGTGGGGGGGGAG...................................171.000.00----------------------------------------------------------------------------------------------------------------1.00---------------------------------------
.GGCGACTGAGGCCGGACGGGGCGGACG..............................................................................................................................................................................................................................2711.001.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................ATGGATGGGGTGGGAAGGGA......2011.001.00---------------------------------------------------1.00----------------------------------------------------------------------------------------------------
.............................................................................GTCGGGCCCGGGGGAAGT...........................................................................................................................................................1821.00149.50----------------------------------------------------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................................ATGGATGGGGTGGGAAGGGAA.....2111.001.00-------------------------------------------------------------------------------------------------------------------------------------1.00------------------
..............................................GAAGGTCAGTCAGGGGGTAG........................................................................................................................................................................................201.000.00---------------------------------1.00----------------------------------------------------------------------------------------------------------------------
............CCGGACGGGGCGGACGGCGA..........................................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------1.00------------------------------------------------------------
..............................................................................TCGGGCCCGGGGGATA............................................................................................................................................................1621.000.50-----------------------------------1.00--------------------------------------------------------------------------------------------------------------------
...........................................GCAGAAGGTCAGTCAGGG.............................................................................................................................................................................................1811.001.00-----------------------------------------------------------------------------------------------------------------------------------------1.00--------------
..............................................................................TCGGGCCCGGGGGATGT...........................................................................................................................................................1711.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................CATCCGGTCTTCTTCCCTCCCGGGGG.................................................................2611.001.00-------------------------------------------------------------------------------------------------1.00------------------------------------------------------
...CGACTGAGGCCGGACGGGGCGGAC...............................................................................................................................................................................................................................2411.001.00-------------------------------------------------------------------------------------------------------------1.00------------------------------------------
.............................................................................GTCGGGCCCGGGGGATT............................................................................................................................................................171.000.00------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................................................CTTCCCTCCCGGGGGTGACG............................................................2011.001.00---------------------------------------------------------------------------------------------------------1.00----------------------------------------------
...................GGGCGGACGGCGACGCAGCCC..................................................................................................................................................................................................................2111.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------------
...........GCCGGACGGGGCGGACGGCGACGCAGTCCG.................................................................................................................................................................................................................301.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................GTTGTCGGGCCCGGGGGAG.............................................................................................................................................................191.000.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.....................GCGGACGGCGACGCAGCCCGCGGCA............................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------------------------------------1.00--------------------------------------------------
........GAGGCCGGACGGGGCGGACG..............................................................................................................................................................................................................................2011.001.00----------------------------------1.00---------------------------------------------------------------------------------------------------------------------
........GAGGCCGGACGGGGCGGACGGCGACGCAGA....................................................................................................................................................................................................................301.000.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................CCTCTTCTCTCTCCCTCTGC...............................................................................................................201.000.00-------------------------------------1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TGGATGGGGTGGGAAGGGACG....2111.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AGGTGGGGGGGGGTGGAGG..............................191.000.00------------------------------------------------------------------------------------------------------------------1.00-------------------------------------
.......TGAGGCCGGACGGGGCGGACGG.............................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------------------------------------------1.00---------------------------
............CCGGACGGGGCGGACGG.............................................................................................................................................................................................................................1711.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................GTCGGGCCCGGGGGAAGG...........................................................................................................................................................1821.00149.50----------------------------------------------------------------------------------------------------1.00---------------------------------------------------
..GCGACTGAGGCCGGACGGGGCGG.................................................................................................................................................................................................................................2311.001.00---------------------------------------------------1.00----------------------------------------------------------------------------------------------------
....GACTGAGGCCGGACGGGGCG..................................................................................................................................................................................................................................2011.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCAGGTGGGGGGGGGTGCGA...............................201.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.........AGGCCGGACGGGGCGGACGGCGACGCA......................................................................................................................................................................................................................2711.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...........GCCGGACGGGGCGGACGGCGACGCAGCC...................................................................................................................................................................................................................2811.001.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------------------
............CCGGACGGGGCGGAC...............................................................................................................................................................................................................................1511.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................GTCGGGCCCGGGGGACG............................................................................................................................................................1721.00149.50-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...CGACTGAGGCCGGACGGGGCG..................................................................................................................................................................................................................................2111.001.00----------------------------------------------------------1.00---------------------------------------------------------------------------------------------
............................................................................TGTCGGGCCCGGGGGA..............................................................................................................................................................1611.001.00-------1.00------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................GTTGTCGGGCCCGGGGGAGGTT..........................................................................................................................................................221.000.00------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GTGACGACAGTGGGAAGGG...............................................191.000.00---------------------------------------------------------------------------------------------------------------------1.00----------------------------------
..........................................................................GTTGTCGGGCCCGGGGGTG.............................................................................................................................................................191.000.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.GGCGACTGAGGCCGGACGGGGCGGACGGC............................................................................................................................................................................................................................2911.001.00---------------------------1.00----------------------------------------------------------------------------------------------------------------------------
.........AGGCCGGACGGGGCGGCCGG.............................................................................................................................................................................................................................201.000.00-------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GGGGGGGGGTGGGACGTA...........................181.000.00-----------------------------------------------1.00--------------------------------------------------------------------------------------------------------
.........AGGCCGGACGGGGCGGACGG.............................................................................................................................................................................................................................2011.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GGGGTGACGACAGTGTC....................................................171.000.00---------------------------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................CCCTCGTTGTTGTCGGGCCCGGGGG...............................................................................................................................................................2511.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................GTCGGGCCCGGGGGATGTTCT........................................................................................................................................................211.000.00---------------------------------------1.00----------------------------------------------------------------------------------------------------------------
......CTGAGGCCGGACGGGGC...................................................................................................................................................................................................................................1711.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------------
...............................................................................CGGGCCCGGGGGATGA...........................................................................................................................................................1641.000.75----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................CGGGCCCGGGGGATGATG.........................................................................................................................................................1841.000.75----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................GGGCCCGGGGGATGT...........................................................................................................................................................1511.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------------
............CCGGACGGGGCGGACGGC............................................................................................................................................................................................................................1811.001.00-------------------------------------------------------1.00------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GGGGGGGGGTGGGACTGA...........................181.000.00-----------------------------------------------1.00--------------------------------------------------------------------------------------------------------
.........AGGCCGGACGGGGCGGAC...............................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------------------------------------------1.00----------------------------
...............................................................................CGGGCCCGGGGGATGT...........................................................................................................................................................1611.001.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------------------
..............................................................................TCGGGCCCGGGGGATT............................................................................................................................................................1621.000.50---------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................GTCGGGCCCGGGGGAA.............................................................................................................................................................1621.00149.50--------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..............................................GAAGGTCAGTCAGGGGGACG........................................................................................................................................................................................2011.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------------------
..GCGACTGAGGCCGGACGGG.....................................................................................................................................................................................................................................1911.001.00--------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
..............................................................................TCGGGCCCGGGGGATGTTCTC.......................................................................................................................................................211.000.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TCGGGCCCGGGGGATG............................................................................................................................................................1621.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TCGGGCCCGGGGGATGCTC.........................................................................................................................................................1921.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00-----------------
...........GCCGGACGGGGCGGACAA.............................................................................................................................................................................................................................181.000.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................ACGACAGTGGGAGCAGGTGGG..........................................2111.001.00----------------------------------------------1.00---------------------------------------------------------------------------------------------------------
..GCGACTGAGGCCGGACGGGGCG..................................................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------1.00---------------------------------------------------------------
...............................................................ACGCCCTCGTTGTTGTCGG........................................................................................................................................................................1911.001.00-------------------------------------------------------------------------------------------------------------------------------1.00------------------------
...........GCCGGACGGGGCGGACGGCGACGCAGC....................................................................................................................................................................................................................2711.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GCAGGTGGGGGGGGGTAAAG...............................201.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------------------------
..............................................................................TCGGGCCCGGGGGATGTTC.........................................................................................................................................................191.000.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------
..GCGACTGAGGCCGGACGGGGCGGAC...............................................................................................................................................................................................................................2511.001.00------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
...............................................................................CGGGCCCGGGGGATG............................................................................................................................................................1540.750.75----0.50-------------------------------------------------------------------------------------------------------------------------------------------------0.25-
.................................................................................................................................................................................................................................TGGATGGGGTGGGAAGGG.......1840.500.50---0.25---------------0.25------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TCGGGCCCGGGGGAT.............................................................................................................................................................1520.500.50----0.50---------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................GGCCCGGGGGATGTT..........................................................................................................................................................1550.200.20------0.20-------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
AGGCGACTGAGGCCGGACGGGGCGGACGGCGACGCAGCCCGCGGCAGAAGGTCAGTCAGGGGGACGCCCTCGTTGTTGTCGGGCCCGGGGGATGTTTGGGCTCCCTTTTTCAGGGTCCACCTCTTCTCTCTCCCTGGTTACCTATAGCCACGGGACGAACATCCGGTCTTCTTCCCTCCCGGGGGTGACGACAGTGGGAGCAGGTGGGGGGGGGTGGGACCGCGATGGATGGGGTGGGAAGGGACGACGG
.........................................................................((((...((((((((((((.((....)))))))).....))))))............((((((((((....)))))).))))..)))).........................................................................................
.......................................................................72.............................................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444047(SRX128895)
Sample 27_1cDNABarcode: AF-PP-343: ACG CTC TT. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
TAX577579(Rovira)
total RNA. (breast)
TAX577744(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033731(GSM497076)
h929 Cell line (h929). (B cell)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
TAX577588(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
SRR444056(SRX128904)
Sample 28cDNABarcode: AF-PP-333: ACG CTC TTC . (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
GSM359175(GSM359175)
hela_5_pct. (hela)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR038860(GSM458543)
MM426. (cell line)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR038863(GSM458546)
MM603. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
TAX577743(Rovira)
total RNA. (breast)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM956925PAZD5SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.............................................................................GTCGGGCCCGGGGGAGGC........................................................................................................................................................... 1829.000.00--------4.001.00------1.00-------2.00------------------1.00------------------------------------------------------------------------------------------------------------
.....................CTGCGTCGCCGTCCGC..................................................................................................................................................................................................................... 1612.002.00--------------2.00-----------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................GAGAGAAGAGGTGGACCCTGAA........................................................................................................................ 2212.002.00----------------------------------------------------------------------------------1.00---------------------1.00-----------------------------------------------
......................................................................................................................ACCTCTTCTCTCTCCCTCTTG............................................................................................................... 212.000.00------------2.00-------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GGTGACGACAGTGGGAA.................................................. 172.000.00--1.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------------------
...........................................................................................................................................................................................................GTGGGGGGGGGTGGGGCC............................. 181.000.00------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
......................................................................................................................ACCTCTTCTCTCTCCCTCATT............................................................................................................... 211.000.00---------------------------------------------------------------------------------------------------------------------------------------1.00----------------
......................................................................................................................ACCTCTTCTCTCTCCCTTTTT............................................................................................................... 211.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GGTGACGACAGTGGGA................................................... 161.000.00------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................................................................................GGGGGGGGGTGGGACGGT........................... 181.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------------------------
.........................................................................................................GAGAAGAGGTGGACCCTGAAAAA.......................................................................................................................... 2311.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................CCAGGGAGAGAGAAGAGGTG................................................................................................................. 2011.001.00------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
...............................................................................................................................................................CCCCCGGGAGGGAAGAAGACCGGATG................................................................. 2611.001.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------------------
......................................................................................................................ACCTCTTCTCTCTCCCTCTTT............................................................................................................... 211.000.00-----------------------------------------------------------1.00--------------------------------------------------------------------------------------------
......................................................................................................................ACCTCTTCTCTCTCCCTTTTG............................................................................................................... 211.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GAGAGAAGAGGTGGACCCTGAAAAAGG........................................................................................................................ 2711.001.00--------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
.......................................................................................................................CCTCTTCTCTCTCCCTGCT................................................................................................................ 191.000.00--------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
.............................................................................................................GAGAGAAGAGGTGGACCCTGA........................................................................................................................ 2111.001.00-----------------------------------------------------------------------------------------------------------1.00--------------------------------------------
..............................................................................................................AGAGAAGAGGTGGACCCTG......................................................................................................................... 1911.001.00---1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CCCCCCCCACCTGCTC..................................... 1630.330.33--------------------------------------------------------------------------------------0.33-----------------------------------------------------------------
..............CCGTCCGCCCCGTCC............................................................................................................................................................................................................................. 1530.330.33--------------------------------------------------------------------------------------------------------------------------------------------0.33-----------
..........................................................................................................................................................................................................TCCCACCCCCCCCCACC............................... 1790.110.11-------------------------------------------------------------------------------------------------------------------------------------------------------0.11