ID: uc010msd.2_intron_7_0_chr9_99113454_r.3p
GENE: (5)
chr9:99113404-99113653-


(1)
AGO2.ip
(5)
B-CELL
(7)
BREAST
(19)
CELL-LINE
(1)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(1)
HELA
(1)
LIVER
(1)
OTHER
(4)
SKIN
(4)
UTERUS

Sense strand
TAAGAAAACTGCTTAAGAAATAATGTAAATTTAGTCTGACTTAGAAACACTTTTAGTGCTTTCTCTGCATCAAGCATTGTCTGCTGGATTTTAGCTATAAAAATGCTGATGTCTATTTTCAATTTGTTTAAAAAATATAATCATATTTCAATGTTTTCCTCTCTGCTCCCTTTCCTTTCTTATTTGTGTATTTATTACAGGAAGCAGTATTCACTCAACATCATCCTCAGTGTCTTTGCCATTATTCTCG
.......................................................................((((((((.....(((((.(((((.........))))).))))).................((((((....))))))))))))))..............................((((.....))))...................................................
...................................................................68..................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................AGCATTGTCTGCTGGGTTT...............................................................................................................................................................1968.000.0010.006.006.006.005.002.004.004.002.002.00-2.002.002.001.001.002.00-1.001.00------1.001.001.001.001.00-1.00--1.00--1.001.00------
........................................................................AGCATTGTCTGCTGGGTT................................................................................................................................................................188.000.003.001.00---2.00-------------------------1.00-----1.00--------
........................................................................AGCATTGTCTGCTGGGTTA...............................................................................................................................................................192.000.00-1.00----------------------------------1.00---------
........................................................................AGCATTGTCTGCTGGGGTT...............................................................................................................................................................192.000.00----1.00-------------------1.00---------------------
........................................................................AGCATTGTCTGCTGGGTTC...............................................................................................................................................................191.000.00--------------1.00-------------------------------
..........................................................................CATTGTCTGCTGGATTTCT.............................................................................................................................................................191.000.00---------------------------------1.00------------
........................................................................AGCATTGTCTGCTGGGCTT...............................................................................................................................................................191.000.00---------------1.00------------------------------
..........................................................................................................................................................................................................................................TTTGCCATTATTCTCCTTT191.000.00----------------------1.00-----------------------
...............................................................................................................................................................................TTTCTTATTTGTGTATAAC........................................................191.000.00----------------------------------1.00-----------
...............................................................................................................................TTAAAAAATATAATCAGAAG.......................................................................................................201.000.00---------------------1.00------------------------
............................................................................................................................................................................................................................TCATCCTCAGTGTCTTTGCAAC........221.000.00-----1.00----------------------------------------
....................................................................................................................................................................................................ACAGGAAGCAGTATTCACT...................................1911.001.00-----------------------------------------1.00----
..........................................................................................................................................................................................................................CATCATCCTCAGTGTCTTTGCCAATA......261.000.00-----------------1.00----------------------------
..........................................................................................................................................................................TTTCCTTTCTTATTTCGGT.............................................................191.000.00----------1.00-----------------------------------
.........................................................................................................................................................TTTTCCTCTCTGCTCCCTTT.............................................................................2020.500.50-----------------0.50----------------------------
...........................................................................ATTGTCTGCTGGATTT...............................................................................................................................................................1650.200.20--------------------------------------------0.20-
........................................................................................................................................................................................TGTGTATTTATTACAG..................................................1680.120.12---------------------------------------------0.12

Antisense strand
TAAGAAAACTGCTTAAGAAATAATGTAAATTTAGTCTGACTTAGAAACACTTTTAGTGCTTTCTCTGCATCAAGCATTGTCTGCTGGATTTTAGCTATAAAAATGCTGATGTCTATTTTCAATTTGTTTAAAAAATATAATCATATTTCAATGTTTTCCTCTCTGCTCCCTTTCCTTTCTTATTTGTGTATTTATTACAGGAAGCAGTATTCACTCAACATCATCCTCAGTGTCTTTGCCATTATTCTCG
.......................................................................((((((((.....(((((.(((((.........))))).))))).................((((((....))))))))))))))..............................((((.....))))...................................................
...................................................................68..................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR029130(GSM416759)
DLD2. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR029132(GSM416761)
MB-MDA231. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR037936(GSM510474)
293cand1. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189787SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR038859(GSM458542)
MM386. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR029126(GSM416755)
143B. (cell line)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
................................................................................................................................................................CTCTGCTCCCTTTCCTCC........................................................................ 181.000.00-------------------------1.00--------------------
...............AGAAATAATGTAAATCACC........................................................................................................................................................................................................................ 191.000.00------------------------------------------1.00---
.................................................................................................................................................................................................................TTCACTCAACATCATAGGA...................... 191.000.00--------------------1.00-------------------------
......................................................................................................................................................................................................................TCAACATCATCCTCATTC.................. 181.000.00-----------------------1.00----------------------
......................................................................................................................................................................................................................TCAACATCATCCTCATACT................. 191.000.00----------------------------------------1.00-----
................GAAATAATGTAAATTCGGC....................................................................................................................................................................................................................... 191.000.00----------1.00-----------------------------------
.......................................................................................................................................................................................................................GACACTGAGGATGATGTTG................ 1920.500.50-------------------------------------------0.50--