| (2) CELL-LINE | (2) CERVIX | (1) FIBROBLAST | (2) LIVER | (1) OTHER | (10) SKIN | (1) XRN.ip |
| ACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCTTCGCCCACTCCACTGTAAGTGACTCTGCAGAACCAGGGGGAGGGGTCTTCCCACCGTGGTAGTGGGCCTGGAGGTCCAGCGGGGGCTCCTGTCTGCTGAGCAGCACATCACACAGGCAGATGGGATGCAGAGATAAGGTACAGACTAGGTCAAATCATAGGAAATAACCAGTATTTAACTCTTTCTCAACTATACAAATGCCATCTTCCTGTGG ...................................................................((((((((((((...)))))).)).))))..((((((....))))))........(((((((((((.................)))))))))))......................................................................................... ...............................................................64................................................................................................162...................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR343335 | SRR343334 | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR189782 | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR040012(GSM532897) G648N. (cervix) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR040020(GSM532905) G699N_2. (cervix) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR444044(SRX128892) Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................CACATCACACAGGCACCAG............................................................................................ | 19 | 231.00 | 0.00 | 117.00 | 114.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................................................CACATCACACAGGCACCA............................................................................................. | 18 | 4.00 | 0.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................ACCCCGTCTTCGCCCACTCC........................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................GTCTTCGCCCACTCCCCC........................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..................................................................................................................GCGGGGGCTCCTGTCTGCTGAGCAGCACATC......................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................CCAGGGGGAGGGGTCTGC.................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ......................................................................................................................................................................AGATAAGGTACAGACTAGGTCAAATCATA....................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTGACTCTGCAGAACCAGGGGGAGGG.......................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................ACAAATGCCATCTTCCTCAT. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................AGCACATCACACAGGCACCAG............................................................................................ | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................AGGGGGAGGGGTCTTTTT.................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................ACAGAAAACCCCGTCTTCGC.................................................................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGTGACTCTGCAGAACCAGGGGGAGGGGT........................................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ............TGGAAGCCACAGAAAACC............................................................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................CCGTCTTCGCCCACTCGAC......................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ...AAGTGATCGTGGAAGCCACA................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................GTAAGTGACTCTGCAGAA...................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCTTCGCCCACTCCACTGTAAGTGACTCTGCAGAACCAGGGGGAGGGGTCTTCCCACCGTGGTAGTGGGCCTGGAGGTCCAGCGGGGGCTCCTGTCTGCTGAGCAGCACATCACACAGGCAGATGGGATGCAGAGATAAGGTACAGACTAGGTCAAATCATAGGAAATAACCAGTATTTAACTCTTTCTCAACTATACAAATGCCATCTTCCTGTGG ...................................................................((((((((((((...)))))).)).))))..((((((....))))))........(((((((((((.................)))))))))))......................................................................................... ...............................................................64................................................................................................162...................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR343335 | SRR343334 | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330912(SRX091750) tissue: normal skindisease state: normal. (skin) | SRR330883(SRX091721) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR330864(SRX091702) tissue: skin psoriatic involveddisease state:. (skin) | SRR037876(GSM522374) fibroblasts_cell_culture. (fibroblast) | SRR189782 | SRR330887(SRX091725) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR444052(SRX128900) Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330901(SRX091739) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin) | SRR040012(GSM532897) G648N. (cervix) | SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR040020(GSM532905) G699N_2. (cervix) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR207119(GSM721081) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR444044(SRX128892) Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................GGGGAGGGGTCTTCCGGC................................................................................................................................................................ | 18 | 2.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................GGGGGAGGGGTCTTCCGCC................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................GGGGAGGGGTCTTCCGGCG............................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................TTTGACCTAGTCTGT............................................................ | 15 | 9 | 0.11 | 0.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.11 |