ID: uc010mlu.2_intron_0_0_chr9_37422803_f.3p
GENE: (1)
chr9:37424642-37424891+


(1)
AGO1.ip
(1)
AGO2.ip
(9)
B-CELL
(1)
BRAIN
(5)
BREAST
(12)
CELL-LINE
(5)
CERVIX
(3)
HEART
(1)
HELA
(5)
LIVER
(2)
OTHER
(17)
SKIN
(1)
TESTES

Sense strand
GCTGGGGGGCCCCTCAGCCCTTCACCTGTCACCTGCTGTCTCGGGACAGTTCTGAGACCACCCCTGCCTGACCCTGCCTCCCCTCAGCCAGCCCCGGGCAGCCTGAGGCCAGGGCCATCAGAGGCCAGGATTCCCAGCTGGGAGGGGCGGGGACAGGTGTGCGGCTCCTGCTTCTCCTGAGGGCCTCCCTTTCCCCGCAGCTGTGAGGTGGAGCAGTGGGACTCGGATGAGCCCATCCCTGCCAAGGAGC
..................................................................................................................................................(((((((.(((.....(((.(((..........))))))..))).)))))))....................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR040039(GSM532924)
G531T. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR040042(GSM532927)
G428N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR040040(GSM532925)
G612N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040019(GSM532904)
G701T. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR038854(GSM458537)
MM653. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189786SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...................................................................................................................................................................................AGGGCCTCCCTTTCCCCGCAGT.................................................2213.000.00-6.00---------1.00------2.00-----------------1.00-----------1.00-----1.001.00-------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTCTTT................................................................................2515.001.00-----1.00-------------------------1.001.00----------1.00---------------1.00---
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTCT..................................................................................2315.001.00-----1.00-----------------------1.00------------1.00-1.00-----1.00------------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTCTT.................................................................................2413.001.00----2.00-1.00--------------------------------------------------------
....................................................................................................................................................................................GGGCCTCCCTTTCCCCGCAGA.................................................213.000.00----------------2.001.00---------------------------------------------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCT....................................................................................2113.003.00--2.00------------------------------------------1.00-----------------
................................................................................................................................................GGGCGGGGACAGGTGTGCGGCTCTTT................................................................................262.000.00---------1.00------------------------------------1.00----------------
.....................................................................................................................................................................................................................CAGTGGGACTCGGATGAGC..................1912.002.00------------2.00--------------------------------------------------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTT...................................................................................2212.003.00---------------2.00-----------------------------------------------
..................................................................................................................................................................................................................GAGCAGTGGGACTCGGATGAGC..................2212.002.00----------2.00----------------------------------------------------
...................................................................................................................................................................................................................AGCAGTGGGACTCGGATGAGC..................2112.002.00-------2.00-------------------------------------------------------
....................................................................................................................................................................................................................GCAGTGGGACTCGGATGAGCC.................2112.002.00-------------------1.00-------------------------------1.00-----------
...........................................................................................................................................................................................................TGAGGTGGAGCAGTGGGACTCG.........................2212.002.00--------2.00------------------------------------------------------
..........................................................................................................................................................AGGTGTGCGGCTCCTGCTGGGG..........................................................................221.000.00---1.00-----------------------------------------------------------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTCTTA................................................................................2511.001.00---------------------------------1.00-----------------------------
..............................................................................................................................................AGGGGCGGGGACAGGTCAAC........................................................................................201.000.00---1.00-----------------------------------------------------------
...........................................................................................................................................................................................................TGAGGTGGAGCAGTGCTGC............................191.000.00----------------------------------1.00----------------------------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTCCT.................................................................................2411.001.00----1.00----------------------------------------------------------
.............................................................................................................................................................................................................................CTCGGATGAGCCCATC.............1611.001.00--------------1.00------------------------------------------------
............................................................................................................................................................................................CTTTCCCCGCAGCTGTGAGGTG........................................2211.001.00------------------------------1.00--------------------------------
...................................................................................................................................................................................AGGGCCTCCCTTTCCCCGCAGTAT...............................................241.000.00---------1.00-----------------------------------------------------
...........................................................................................................................................................................................................TGAGGTGGAGCAGTGGTGCT...........................201.000.00-------------------------1.00-------------------------------------
...................................................................................................................................................................................AGGGCCTCCCTTTCCCCGCAGTT................................................231.000.00-----------------------------------------1.00---------------------
.............................................................................................................................CAGGATTCCCAGCTGGCT...........................................................................................................181.000.00-------------1.00-------------------------------------------------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTCTGTT...............................................................................2611.001.00---------------------------1.00-----------------------------------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTCAT.................................................................................2411.001.00--------------------------------------------------------1.00------
........................................................................................................................................................................................................CTGTGAGGTGGAGCAAAT................................181.000.00------1.00--------------------------------------------------------
...............................................................CTGCCTGACCCTGCCGG..........................................................................................................................................................................171.000.00-----------------------------------------------1.00---------------
.................................................................................................................................................GGCGGGGACAGGTGTGCGGCTC...................................................................................2211.001.00--1.00------------------------------------------------------------
.............................................................................................................................................GAGGGGCGGGGACAGGGCGG.........................................................................................201.000.001.00--------------------------------------------------------------
..........................................................................................................................GGCCAGGATTCCCAGGAAT.............................................................................................................191.000.00-------------1.00-------------------------------------------------
................................................................................................................................................GGGCGGGGACAGGTGTGCGGCTCTT.................................................................................251.000.00-----------------------1.00---------------------------------------
...................................................................................................................................................................................AGGGCCTCCCTTTCCCCGT....................................................191.000.00----------------------1.00----------------------------------------
.............................................................................................................................................GAGGGGCGGGGACAGGTTTG.........................................................................................201.000.001.00--------------------------------------------------------------
......................................................................................................................................................................................................................AGTGGGACTCGGATGAGC..................1811.001.00--1.00------------------------------------------------------------
.............................................................................................................................................GAGGGGCGGGGACAGGTCTG.........................................................................................201.000.001.00--------------------------------------------------------------
...........................................................................................................................................................................................................TGAGGTGGAGCAGTGTATC............................191.000.00---------------------1.00-----------------------------------------
...................................................................................................................................................................................AGGGCCTCCCTTTCCCCGCAGA.................................................221.000.00----------------------------------------------------1.00----------
...................................................................................................................................................................................................................AGCAGTGGGACTCGGATGAGCC.................2211.001.00--------------------------------------1.00------------------------
...................................................................................................................................................................................AGGGCCTCCCTTTCCCCGCAGTAG...............................................241.000.00-----------------1.00---------------------------------------------
...................................................................................................................................................................................AGGGCCTCCCTTTCCCCGCA...................................................2011.001.00-----------1.00---------------------------------------------------
.....................................................................................................................................................................................................................CAGTGGGACTCGGATGA....................1711.001.00-------------------------------------1.00-------------------------
.......................................................................................................................................................................................................GCTGTGAGGTGGAGCGA..................................171.000.00-----------------------------------------------------1.00---------
.........................................................................................................................AGGCCAGGATTCCCAGCTGGGAGGGGCG.....................................................................................................2811.001.00-----1.00---------------------------------------------------------
................................................................................................................................................GGGCGGGGACAGGTGTGCGGCTCTTCT...............................................................................271.000.00-------------------------------------------------1.00-------------
..................................................TCTGAGACCACCCCTCCCG.....................................................................................................................................................................................191.000.001.00--------------------------------------------------------------
......................................................................................................................................................................................GCCTCCCTTTCCCCGCCGC.................................................191.000.00--------------------------1.00------------------------------------
.........................................................................................................................................................................................................TGTGAGGTGGAGCAGTGGG..............................1911.001.00------1.00--------------------------------------------------------
.............................................................................................................................................................................................................AGGTGGAGCAGTGGGACT...........................1820.500.50------------------------------------------------------------0.50--
..............................................................................................................................AGGATTCCCAGCTGG.............................................................................................................1560.170.17--------------------------------------------------------------0.17

Antisense strand
GCTGGGGGGCCCCTCAGCCCTTCACCTGTCACCTGCTGTCTCGGGACAGTTCTGAGACCACCCCTGCCTGACCCTGCCTCCCCTCAGCCAGCCCCGGGCAGCCTGAGGCCAGGGCCATCAGAGGCCAGGATTCCCAGCTGGGAGGGGCGGGGACAGGTGTGCGGCTCCTGCTTCTCCTGAGGGCCTCCCTTTCCCCGCAGCTGTGAGGTGGAGCAGTGGGACTCGGATGAGCCCATCCCTGCCAAGGAGC
..................................................................................................................................................(((((((.(((.....(((.(((..........))))))..))).)))))))....................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR040039(GSM532924)
G531T. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR029125(GSM416754)
U2OS. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR040042(GSM532927)
G428N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR040040(GSM532925)
G612N. (cervix)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR040019(GSM532904)
G701T. (cervix)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR038854(GSM458537)
MM653. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR189786SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................................................AGGGGCGGGGACAGGTGC.......................................................................................... 184.000.00--------------------1.00---1.00----------1.00---------------------1.00-----
..............................................................................................................................................AGGGGCGGGGACAGGTGCC......................................................................................... 192.000.00----------------------------1.00-----------1.00----------------------
................................................GTTCTGAGACCACCCCTGCG...................................................................................................................................................................................... 201.000.00---------------------------------------1.00-----------------------
......................................................................................................................................................AGGAGAAGCAGGAGCCGCACACCTGTCC........................................................................ 2811.001.00--------------1.00------------------------------------------------
............................................................CCCCTGCCTGACCCTGATG........................................................................................................................................................................... 191.000.00---1.00-----------------------------------------------------------
...................................................................................................................................................................GCTCCTGCTTCTCCTTGTT.................................................................... 191.000.00----------------------------------------------------------1.00----
...........................................................................................................................................................................................CCTTTCCCCGCAGCTTTTG............................................ 191.000.001.00--------------------------------------------------------------
............................................................CCCCTGCCTGACCCTAA............................................................................................................................................................................. 171.000.00---1.00-----------------------------------------------------------
........................................................................................................................................................................................CTCCCTTTCCCCGCAAGTG............................................... 191.000.001.00--------------------------------------------------------------
............................................................................................CTCAGGCTGCCCGGG............................................................................................................................................... 1540.250.25-------------------------------------------------------------0.25-
...........................................................................CTGGCTGAGGGGAGGC............................................................................................................................................................... 1690.110.11-------------------0.11-------------------------------------------