ID: uc010mkb.2_intron_3_0_chr9_34269361_r.5p
GENE: (8)
chr9:34271607-34271856-


(3)
B-CELL 		(2)
BRAIN 		(4)
BREAST 		(18)
CELL-LINE 		(1)
FIBROBLAST 		(2)
HEART 		(1)
KIDNEY 		(1)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(7)
SKIN 		(1)
TESTES 		(1)
UTERUS

Sense strand
GCCGTCATCCAAATTCAGATCAAAGATTCAGCCAAGAGGACATTTGGCAGGTGAGCTGGAAATATCAGGGAGTTACATTGTCTGCCTTTCCTTTAATGTGACTTTGAAGTATGTTTTCTCAACAACAGGATACCCTGCTACCATGGAGTTCTTCATTGCAGGGATACAGAGTAGAGTTGTTAGCCCTGAAATAAATCATTGTACTAAAGTGTCAACAGTTGATTAACCATGAAGTAATGACCTATTGTTG
....................................................................((((((((((((.............)))))))))))).................................................................................................................................................
.................................................................66.....................................................121...............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577580(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
......................................................................AGTTACATTGTCTGCTGGG.................................................................................................................................................................1959.000.0016.008.007.006.004.00---1.00--1.00-1.001.001.00--1.00---1.001.00-1.00----1.001.001.001.001.001.00--1.00--1.001.00
......................................................................AGTTACATTGTCTGCTGG..................................................................................................................................................................188.000.001.00---1.00--1.001.00--------1.00--1.00------1.00--------1.00------
......................................................................AGTTACATTGTCTGCTG...................................................................................................................................................................175.000.00-------1.00--2.00-----1.00------------1.00-------------
......................................................................AGTTACATTGTCTGCTGGA.................................................................................................................................................................194.000.001.00----------1.00-------------------------1.00--1.00--
....................................AGGACATTTGGCAGGATC....................................................................................................................................................................................................182.000.00-----2.00-------------------------------------
.................................................................................................GTGACTTTGAAGTATGTAAA.....................................................................................................................................201.000.00------------1.00------------------------------
...............................CCAAGAGGACATTTGGCAGGAA.....................................................................................................................................................................................................221.000.00-----1.00-------------------------------------
......................................................................AGTTACATTGTCTGCTGGT.................................................................................................................................................................191.000.001.00------------------------------------------
.............TTCAGATCAAAGATTCAGCCAAGAGGAC.................................................................................................................................................................................................................2811.001.00------1.00------------------------------------
.........CAAATTCAGATCAAAGATTCAG...........................................................................................................................................................................................................................2211.001.00---------------------------------------1.00---
..................................AGAGGACATTTGGCATAA......................................................................................................................................................................................................181.000.00--------------------------1.00----------------
.............TTCAGATCAAAGATTCAGCCAAGAG....................................................................................................................................................................................................................2511.001.00------1.00------------------------------------
........CCAAATTCAGATCAAAGATTCAGA..........................................................................................................................................................................................................................241.000.00----------------------------1.00--------------
.................................AAGAGGACATTTGGCAG........................................................................................................................................................................................................1711.001.00------------------------1.00------------------
......................................................................AGTTACATTGTCTGCCGGGC................................................................................................................................................................201.000.00---------1.00---------------------------------
................................CAAGAGGACATTTGGCAG........................................................................................................................................................................................................1811.001.00---------------------1.00---------------------
......................................................................AGTTACATTGTCTGCCGGT.................................................................................................................................................................191.000.00---------1.00---------------------------------
......................................................................AGTTACATTGTCTGCTGAG.................................................................................................................................................................191.000.001.00------------------------------------------
.............TTCAGATCAAAGATT..............................................................................................................................................................................................................................1580.120.12------0.12------------------------------------

Antisense strand
GCCGTCATCCAAATTCAGATCAAAGATTCAGCCAAGAGGACATTTGGCAGGTGAGCTGGAAATATCAGGGAGTTACATTGTCTGCCTTTCCTTTAATGTGACTTTGAAGTATGTTTTCTCAACAACAGGATACCCTGCTACCATGGAGTTCTTCATTGCAGGGATACAGAGTAGAGTTGTTAGCCCTGAAATAAATCATTGTACTAAAGTGTCAACAGTTGATTAACCATGAAGTAATGACCTATTGTTG
....................................................................((((((((((((.............)))))))))))).................................................................................................................................................
.................................................................66.....................................................121...............................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577580(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR029126(GSM416755)
143B. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577589(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................................CAACAACAGGATACCCTGG................................................................................................................ 191.000.00-------------------1.00-----------------------