ID: uc010mjm.2_intron_4_0_chr9_32987730_r
GENE: (2)
chr9:32987680-32988130-


(1)
B-CELL 		(2)
BRAIN 		(2)
BREAST 		(17)
CELL-LINE 		(1)
CERVIX 		(2)
HEART 		(3)
HELA 		(6)
LIVER 		(2)
OTHER 		(14)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
CAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGTGTATTTATAACTTGGAATTTTATACTCGATGATTTTCTTATGCTGTTGACTTTAGAGTGTCTGTGCCAGCCAGTGAAGGCTTCTCTGTCATGTATGGAAGTGATGGAGTAATATAGGTGAACATAAGGCAAGGTGCTTGGCATATAGTAAGTGGTTAACATAGCAGTGGCTATCTTACTGTAGGTGCTGTTGCTATTATTATAATTATTTTCTGATTGTTTATTCCATAGGTAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGA
.................................................................................................................................................((.((((((....(((......)))..(((((((..((((.....))))......(((.(((((((((..(((((((..((.((((......))))))..))))))).....))))))))).)))..))))))))))))).))...................................................................................................................................................................
..............................................................................................................................................143................................................................................................................................................290...............................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR189784SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR189787SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTGTAGAGTTTGAGGAAGAGGCA.................................2519.009.00-9.00------------------------------------------------------
.......................................................................................................................................................................................................................................................................TTTTCTGATTGTTTATTCCATAG.....................................................................................................................................................................2317.007.00------------2.00--1.00------1.00--------------1.00-----1.00--1.00---------
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTGTAGAGTTTGAGGAAGAGGC..................................2415.005.00-1.001.00------3.00----------------------------------------------
................................................................................................................................................................................................................................................................................................................................................AGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAG..........................................7315.005.00------5.00-------------------------------------------------
.......................................................................................................................................................................................................................................................................TTTTCTGATTGTTTATTCCATAGA....................................................................................................................................................................2414.007.00--3.00-------------------------------------1.00---------------
.......................................................................................................................................................................................................................................................................................................................................................AAGCTGCAGCCTGGCCAGGTTCTCCACACGG.............................................................................314.000.004.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TATATTGTAGAGTTTGAGGAAGAGGC..................................2614.004.00-4.00------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGAGGAAGAGGCAAAGAACCCTGGCCGG..................323.000.003.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAGAGGCAAAGAACCCTGGCCCGG.................273.000.002.00--1.00----------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGCAAAGAACCCTGGCCCGG.................242.000.00---2.00----------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTGTAGAGTTTGAGGAAGAGGCAAAGA.............................2912.002.00-2.00------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGAGGCAAAGAACCCTGGCCTGG.................2812.002.002.00-------------------------------------------------------
...................................................................................................................................................................................................................TAACATAGCAGTGGCTATCTTACTGTAGGTGCTGTTGCTATTATTATAATTATTTTCTGATTGTTTATTCCATAG.....................................................................................................................................................................7512.002.00-----------2.00--------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTGTAGAGTTTGAGGAAGAGG...................................2312.002.00--------------2.00-----------------------------------------
...................................................................................................................................................GTATGGAAGTGATGGATTG.............................................................................................................................................................................................................................................................................................192.000.00-------2.00------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................GGGAAGGACCAAGAGGTGAAGCT.......................................................................................................2312.002.00--------2.00-----------------------------------------------
..................................TGTCAAGGTAAAGCAGGTAGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................232.000.002.00-------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................ATATATTGTAGAGTTTGAGGAAGAGGC..................................2712.002.00-1.00---1.00--------------------------------------------------
...........................AGGGATATGTCAAGGTAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00-----2.00--------------------------------------------------
......................................................................................................................................................................................................................................................................ATTTTCTGATTGTTTATTCCATAGAA...................................................................................................................................................................2612.001.00--1.00-------------------------------1.00---------------------
.......................................................................................................................................................................................................................................................................................................................................................AAGCTGCAGCCTGGCCAGGTTCCCC...................................................................................252.000.002.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................AAGCTGCAGCCTGGCCAGGTCCTC....................................................................................242.000.002.00-------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGAGGCAAAGAACC..........................1912.002.00-----2.00--------------------------------------------------
........................................................................ATTTTATACTCGATGCACA........................................................................................................................................................................................................................................................................................................................................................................192.000.00-------2.00------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTGTAGAGTTTGAGGAAGAGGC..................................2312.002.00----2.00---------------------------------------------------
...............................................................................................ATGCTGTTGACTTTAGAG..................................................................................................................................................................................................................................................................................................................................................1811.001.00-----------------------------------1.00--------------------
...........................................................................................................................................................................................................................................................................CTGATTGTTTATTCCATAGGTAG.................................................................................................................................................................2311.001.00--------------------------------------------1.00-----------
......................................................................................................................................................................................................................................................................ATTTTCTGATTGTTTATTCCATAG.....................................................................................................................................................................2411.001.00------------------------------------------1.00-------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGAGTTTGAGGAAGAGGCAAAGA.............................2711.001.00-1.00------------------------------------------------------
.....................................................................................................................................................................................................................................................................TATTTTCTGATTGTTTATTCCATAG.....................................................................................................................................................................2511.001.00--1.00-----------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................TTTATCCATATATTGTAG..................................................1811.001.00---------------1.00----------------------------------------
................................................................................................................................................................................................................................................................................................................................................AGAGGTGAAGCTGCAGCCTGGCCAGGTTCCC....................................................................................311.000.001.00-------------------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCAAAGAACCCTGGCCTGGAA...............2411.001.00----1.00---------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................TGAAGCTGCAGCCTGGCCAGGTTCCC....................................................................................261.000.00---1.00----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGGTGAAGCTGCAGCCTGGCCAGGTTCCCCA..................................................................................311.000.001.00-------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TATATTGTAGAGTTTGAGGAAGAGGCAAA...............................2911.001.00-1.00------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................ATGGTGAATGAACTTTATC..............................................................1911.001.00-----1.00--------------------------------------------------
..................................................................................................CTGTTGACTTTAGAGTGTCTGG...........................................................................................................................................................................................................................................................................................................................................221.000.00---------------------------------1.00----------------------
..........................................................................................................................................................................................................................................................ATTATTATAATTATTTACTT.....................................................................................................................................................................................201.000.00------------------------------------------------1.00-------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGAGGAAGAGGCAAAGAACCCT........................2611.001.00--1.00-----------------------------------------------------
.....................................................................................................................................................................................................................................................................................ATTCCATAGGTAGGAGTC............................................................................................................................................................1811.001.00------------------------1.00-------------------------------
.....................................................................................................................................................................................................................................................................TATTTTCTGATTGTTTATTCCATAGA....................................................................................................................................................................2611.001.00--1.00-----------------------------------------------------
.....................................................................................................................................................................................AGGCAAGGTGCTTGGAAT............................................................................................................................................................................................................................................................181.000.00----------------1.00---------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAACCCTGGCCTGGAAA..............2011.001.00-------------1.00------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTAGAGTTTGAGGAAGAG....................................2311.001.00-----------------1.00--------------------------------------
...............................................................................................................................................................................................................................................................................................................................................AAGAGGTGAAGCTGCAGCCTGGCCAGGTTCCC....................................................................................321.000.001.00-------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGAGTTTGAGGAAGAGGC..................................2211.001.00-1.00------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................AGAGGTGAAGCTGCAGCCTGGCCAGGC........................................................................................271.000.001.00-------------------------------------------------------
.............AGCAGAGTGTAACAAGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--1.00-----------------------------------------------------
......................................................................................................................................................................................................................................................................ATTTTCTGATTGTTTATTCCATAT.....................................................................................................................................................................241.000.00-----------------------------------------1.00--------------
..................................................................................................................................................................................................................................................................................................................................................................................ATGGTGAATGAACTTTATA..............................................................191.000.00-----1.00--------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................GGAAGGACCAAGAGGTGAAGCTGCAG...................................................................................................2611.001.00-------------1.00------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGGTGAAGCTGCAGCCTGGCCAGGTTCCCC...................................................................................301.000.00---1.00----------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAAGAGGCAAAGAACCCTGGCCCGG.................291.000.001.00-------------------------------------------------------
.........................................................................................................................................................................................AAGGTGCTTGGCATACTGC.......................................................................................................................................................................................................................................................191.000.001.00-------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGGTGAAGCTGCAGCCTGGCCAGGTC.......................................................................................261.000.001.00-------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................TCCATATATTGTAGAGTTTGAGGAAGAGGC..................................3011.001.00-1.00------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGAGGAAGAGGCAAAG..............................2011.001.00--------1.00-----------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TATATTGTAGAGTTTGAGGAAGAGG...................................2511.001.00-------------------1.00------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACCCTGGCCTGGAAACACACAGG......2711.001.00---------------------------1.00----------------------------
.......................AACAAGGGATATGTCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------------------------------------1.00----------
.............................................................................................................................................................................................................................................................................................................................................................................................ACTTTATCCATATATTGTAGAGT...............................................2311.001.00----------------------------1.00---------------------------
.....................................................................................................................................................................................................................................................................................................................................................TGAAGCTGCAGCCTGGCCAGGTTCCCC...................................................................................271.000.001.00-------------------------------------------------------
.........................CAAGGGATATGTCAAGGTAAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00------------------------------------1.00-------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGAGGAAGAGGCAAAGAACCCTGGCCCGG.................331.000.001.00-------------------------------------------------------
....................TGTAACAAGGGATATGTCAAGGTAAAGCAGG................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00-1.00------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTGTAGAGTTTGAGGAAGAGGCAAA...............................2711.001.00---------------------------------------1.00----------------
......................................................................................................................................................................................................................................................................................................................................................................................................ATATATTGTAGAGTTTGAGGAAGAGGCA.................................2811.001.00----1.00---------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGAGGAAGAGGCAAAGAACCCTGGAAA...................301.000.00-----------------------------------------------1.00--------
..................................................................................................................................................................................................................................................................................................................................................AGGTGAAGCTGCAGCCTGGCCAGGTT.......................................................................................2611.001.00----1.00---------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTGTAGAGTTTGAGGAAGATGCA.................................251.000.00----------1.00---------------------------------------------
......................................................................................................................................................................ATATAGGTGAACATAAGGCAAGGTGCT..................................................................................................................................................................................................................................................................2711.001.00----1.00---------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................AGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGT........................................................................................3411.001.00---1.00----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGGTGAAGCTGCAGCCTGGCCAGGCTCT.....................................................................................281.000.001.00-------------------------------------------------------
...................GTGTAACAAGGGATATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------------1.00--------------------------------
........................................................................................................................................................................................................................................................................................................................................................AGCTGCAGCCTGGCCAGGTTCTCCACGGTG.............................................................................301.000.00---1.00----------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGAGTTTGAGGAAGAGGCAAA...............................2511.001.00-1.00------------------------------------------------------
........................................................................................................................................................GAAGTGATGGAGTAAGGA.........................................................................................................................................................................................................................................................................................181.000.00--------1.00-----------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TATATTGTAGAGTTTGAGGAAGAGGCA.................................2711.001.00-1.00------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGAGGCAAAGAACCC.........................2011.001.00----1.00---------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGGCAAAGAACCCTG.......................1911.001.00--------------------------1.00-----------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAGAGGCAAAGAACCCT........................2111.001.00--------------------------------1.00-----------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGAGTTTGAGGAAGAGG...................................2111.001.00----------1.00---------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTGTAGAGTTTGAGGAAGAGGCAA................................2511.001.00-1.00------------------------------------------------------
................................................................AACTTGGAATTTTATACTCGATGA...........................................................................................................................................................................................................................................................................................................................................................................2411.001.00-------------------------------1.00------------------------
..................................................................................................................................................................................................................................................................................................................................................................................ATGGTGAATGAACTTTATCCAT...........................................................2211.001.00------------------1.00-------------------------------------
..................................................................................................................................................................................................................................................................................................................................ATTGGGAAGGACCAAGAGGTGAAGCT.......................................................................................................2611.001.00---------------------1.00----------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTGTAGAGTTTGAGGAAGAGGCAAAG..............................2711.001.00-----------------1.00--------------------------------------
.......................AACAAGGGATATGTCAAGGTAA......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-----------------------------1.00--------------------------
................................TATGTCAAGGTAAAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00--------------------------------------1.00-----------------
........................................................................................................................................................................................................................................................................................................................................................AGCTGCAGCCTGGCCAGGT........................................................................................1920.500.50---------------------------------------------------0.50----
.....................................................................................................................................................................................AGGCAAGGTGCTTGGC..............................................................................................................................................................................................................................................................1630.330.33------------------0.33-------------------------------------
..................................................................................................................................................TGTATGGAAGTGATGG.................................................................................................................................................................................................................................................................................................1630.330.33----------------------------------------------------0.33---
............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCAAAGAACCCTGG......................1730.330.33-----------------------------------------------------0.33--
..........................................................................................................................................................................................................................................TGTAGGTGCTGTTGCT.........................................................................................................................................................................................................1630.330.33-------------------0.33------------------------------------
.........................................................................................................CTTTAGAGTGTCTGT...........................................................................................................................................................................................................................................................................................................................................1550.200.20------------------------------------------------------0.20-
........................................................................................................................................................................................................TAGTAAGTGGTTAACA...........................................................................................................................................................................................................................................1650.200.20-------------------------------------------------------0.20
.........................................................................................................................................................................................................................................CTGTAGGTGCTGTTG...........................................................................................................................................................................................................1560.170.17-------------------------------------------------0.17------
..................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACCCTGGCCTGG.................1680.120.12----------0.12---------------------------------------------

Antisense strand
CAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAGGTAGGTGTATTTATAACTTGGAATTTTATACTCGATGATTTTCTTATGCTGTTGACTTTAGAGTGTCTGTGCCAGCCAGTGAAGGCTTCTCTGTCATGTATGGAAGTGATGGAGTAATATAGGTGAACATAAGGCAAGGTGCTTGGCATATAGTAAGTGGTTAACATAGCAGTGGCTATCTTACTGTAGGTGCTGTTGCTATTATTATAATTATTTTCTGATTGTTTATTCCATAGGTAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCAGGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGA
.................................................................................................................................................((.((((((....(((......)))..(((((((..((((.....))))......(((.(((((((((..(((((((..((.((((......))))))..))))))).....))))))))).)))..))))))))))))).))...................................................................................................................................................................
..............................................................................................................................................143................................................................................................................................................290...............................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR189784SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR343334SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037936(GSM510474)
293cand1. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR189787SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577579(Rovira)
total RNA. (breast)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782
........................................................................................................................................................................................................................................ACTGTAGGTGCTGTTGCA......................................................................................................................................................................................................... 181.000.00-------------------------1.00------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTAGAGTTTGGGA......................................... 181.000.00------------------------------1.00-------------------------
...................................................................................................................................AAGGCTTCTCTGTCATTCT............................................................................................................................................................................................................................................................................................................. 191.000.00----------------1.00---------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTTCTTTGCCTCTTC........................ 1811.001.00---1.00----------------------------------------------------
....................................................................................................................................................................................................................................................................TTATTTTCTGATTGTTTAAAA.......................................................................................................................................................................... 211.000.00--------------------1.00-----------------------------------
...............................................................................................................................................................................................................................................................................................................................................................GGAGAACCTGGCCAGGC................................................................................... 1750.600.60--------------------------------------------------0.60-----
................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCAGGGTTCTTTG................... 1620.500.50-------------------------------------------------0.50------