ID: uc010mao.2_intron_13_0_chr8_93107400_r
GENE: (1)
chr8:93107350-93107624-


(2)
AGO2.ip 		(3)
BRAIN 		(12)
BREAST 		(10)
CELL-LINE 		(4)
CERVIX 		(2)
HEART 		(2)
LIVER 		(1)
OTHER 		(7)
SKIN 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
CTGGGTGCCGCCTCGGCCGCGGCCGCTCTCCCGCGCTCCTTTGCCAGAAGGTAATCTCCGTGAACAGGGGAGGGAGGCGAGCAGGGAGGAAGGAGGGGTGGCCAGGAGGAAGGGGGGCGTGGGGAGGCGGCTTTTCTCTCTCCCTCTCTCCCTTTCCAAATGATTCAGAAGTCGATAAGACCAGGAGAAGTGAAGATGTAACATGTTATCTGTCGCTCCTCTTAGCTGGCGGAGAGAATTTACATTTAAAGATTAGCAGAGTGAGAAAGAGAAAT
.....................................................................................................((.((.((((((((((...(((((((.((.....)).)))))))..))))))))))...((((......))))......)).))..........................................................................................
.................................................................................................98........................................................................................................204.....................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040035(GSM532920)
G001T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		TAX577739(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532875(GSM532875)
G547N. (cervix)		SRR343336SRR040016(GSM532901)
G645N. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189785SRR040031(GSM532916)
G013T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR343335SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
......................................................................................................CAGGAGGAAGGGGGGGAC...........................................................................................................................................................187.000.007.00-----------------------------------------------
.....................................................................................................CCAGGAGGAAGGGGGGGAC...........................................................................................................................................................195.000.005.00-----------------------------------------------
......................................................................................................................................................................................AGGAGAAGTGAAGATGTA...........................................................................1814.004.00--4.00---------------------------------------------
......................................................................................................................................................................................AGGAGAAGTGAAGATGTAACATGTTA...................................................................2614.004.00-4.00----------------------------------------------
......................................................................................................CAGGAGGAAGGGGGGGACG..........................................................................................................................................................193.000.003.00-----------------------------------------------
.................................................................................................................................................................................AGACCAGGAGAAGTGAAGATG.............................................................................2112.002.00----------2.00-------------------------------------
......................................................................................................................................................................................AGGAGAAGTGAAGATGTAACATG......................................................................2312.002.00-----------2.00------------------------------------
........................................................................................................................GGGGAGGCGGCTTTTTTTT........................................................................................................................................192.000.00------1.00--------------------1.00--------------------
.....................................................................................................CCAGGAGGAAGGGGGGGACG..........................................................................................................................................................202.000.002.00-----------------------------------------------
..................................................................................................................................................................................GACCAGGAGAAGTGAAGATG.............................................................................2012.002.00-------1.00---------------1.00------------------------
...................................................................................................................................................................................ACCAGGAGAAGTGAAGATG.............................................................................1912.002.00------1.00---------------1.00-------------------------
...............................................................................AGCAGGGAGGAAGGAGGTG.................................................................................................................................................................................191.000.00--------------------------------1.00---------------
....................................................................................................................................................................................................................................GCGGAGAGAATTTACATTTAAAGATTAGCAGAG..............3311.001.00----------------------------------------1.00-------
.........................................................................................AAGGAGGGGTGGCCAGGAAA......................................................................................................................................................................201.000.00---------------------------------------1.00--------
.............CGGCCGCGGCCGCTCTGGAC..................................................................................................................................................................................................................................................201.000.00----1.00-------------------------------------------
..............................................................................................................................................................................ATAAGACCAGGAGAAGTGAAG................................................................................2111.001.00---------1.00--------------------------------------
..................................................................................................................................................................................GACCAGGAGAAGTGAAGATGTAACAT.......................................................................2611.001.00------------1.00-----------------------------------
...........................................................................GGCGAGCAGGGAGGACAGA.....................................................................................................................................................................................191.000.00-------1.00----------------------------------------
............................................................................................................................................................................CGATAAGACCAGGAGAAGTGATGAT..............................................................................251.000.00------------------------------1.00-----------------
.............CGGCCGCGGCCGCTCCGG....................................................................................................................................................................................................................................................181.000.00----1.00-------------------------------------------
.................................................................................................................................................................GATTCAGAAGTCGATGGG................................................................................................181.000.00------------------------------------------1.00-----
.........................................................................................................................................CTCTCCCTCTCTCCCTTCAG......................................................................................................................201.000.00----------------------------1.00-------------------
..............................................................AACAGGGGAGGGAGGCGAGCAGGGAGG..........................................................................................................................................................................................2711.001.00-------------------------------1.00----------------
........................................................................................................................................................................AAGTCGATAAGACCAGGAGAAG.....................................................................................2211.001.00---------1.00--------------------------------------
...........................................................................GGCGAGCAGGGAGGACA.......................................................................................................................................................................................171.000.00-------------------------1.00----------------------
.......................CGCTCTCCCGCGCTCCTCCC........................................................................................................................................................................................................................................201.000.00------------------1.00-----------------------------
................................................................................................................................................................................AAGACCAGGAGAAGTGAAGATG.............................................................................2211.001.00------------1.00-----------------------------------
.....................................................................................................CCAGGAGGAAGGGGGATA............................................................................................................................................................181.000.00-------------------------------------1.00----------
.............................................................................................................................................................................GATAAGACCAGGAGAAGTGAAGATG.............................................................................2511.001.00--------------------------------------------1.00---
.....................................................................................................CCAGGAGGAAGGGGGGGA............................................................................................................................................................181.000.001.00-----------------------------------------------
..........................................................................................................AGGAAGGGGGGCGTGGGGAGGCGGCCTTT............................................................................................................................................291.000.00---------------------------------1.00--------------
................................................................................................................................................................................AAGACCAGGAGAAGTGAAGAT..............................................................................2111.001.00-----------------------------------1.00------------
.....................................................................................................................................................................................CAGGAGAAGTGAAGATGTAACAT.......................................................................2311.001.00--------------------------------------1.00---------
................................................................................................................................................................................AAGACCAGGAGAAGTGAAGA...............................................................................2011.001.00-------------------1.00----------------------------
......................CCGCTCTCCCGCGCTACA...........................................................................................................................................................................................................................................181.000.00--------------------1.00---------------------------
................................................................................................................................................................................AAGACCAGGAGAAGTGAAGATGTAACATGTT....................................................................3111.001.00-----------------1.00------------------------------
...................................................................................................................GGCGTGGGGAGGCGGCGGG.............................................................................................................................................191.000.00----------------1.00-------------------------------
.....................................................................................................................................................................CAGAAGTCGATAAGACCAGGAGA.......................................................................................2311.001.00---------------1.00--------------------------------
..................................................................GGGGAGGGAGGCGAGTC................................................................................................................................................................................................171.000.00----------------------------------1.00-------------
.................CGCGGCCGCTCTCCC...................................................................................................................................................................................................................................................1580.120.12-----------------------------------------------0.12
.................CGCGGCCGCTCTCCCACCC...............................................................................................................................................................................................................................................1980.120.12----------------------------------------------0.12-

Antisense strand
CTGGGTGCCGCCTCGGCCGCGGCCGCTCTCCCGCGCTCCTTTGCCAGAAGGTAATCTCCGTGAACAGGGGAGGGAGGCGAGCAGGGAGGAAGGAGGGGTGGCCAGGAGGAAGGGGGGCGTGGGGAGGCGGCTTTTCTCTCTCCCTCTCTCCCTTTCCAAATGATTCAGAAGTCGATAAGACCAGGAGAAGTGAAGATGTAACATGTTATCTGTCGCTCCTCTTAGCTGGCGGAGAGAATTTACATTTAAAGATTAGCAGAGTGAGAAAGAGAAAT
.....................................................................................................((.((.((((((((((...(((((((.((.....)).)))))))..))))))))))...((((......))))......)).))..........................................................................................
.................................................................................................98........................................................................................................204.....................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040035(GSM532920)
G001T. (cervix)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		TAX577739(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		TAX577589(Rovira)
total RNA. (breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR189784TAX577580(Rovira)
total RNA. (breast)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM532875(GSM532875)
G547N. (cervix)		SRR343336SRR040016(GSM532901)
G645N. (cervix)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR189785SRR040031(GSM532916)
G013T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR343335SRR060168(GSM565978)
5-8F_nucleus. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
..........................................................................................................................................................................................GAAGTGAAGATGTAACTG....................................................................... 183.000.00-----1.00---------------1.00--------------1.00-----------
.........................CTCTCCCGCGCTCCTTGC........................................................................................................................................................................................................................................ 182.000.00---1.00-------------------------1.00------------------
..........................TCTCCCGCGCTCCTTACC....................................................................................................................................................................................................................................... 182.000.00--------2.00---------------------------------------
................................................................................................................................................................................AAGACCAGGAGAAGTTTG................................................................................. 181.000.00---1.00--------------------------------------------
.........................................................................................................................................................................................................................................................AGATTAGCAGAGTGACAG........ 181.000.00-----1.00------------------------------------------
.................................ACCTTCTGGCAAAGGAGCG............................................................................................................................................................................................................................... 1911.001.00-------------1.00----------------------------------
....................................................................................................................................................................................................TGTAACATGTTATCTGGCT............................................................ 191.000.00-------------------------------------------1.00----
..........................TCTCCCGCGCTCCTTTTG....................................................................................................................................................................................................................................... 181.000.00-----------------------------------------1.00------
.........................AAAGGAGCGCGGGAGAG......................................................................................................................................................................................................................................... 1711.001.00------------------------1.00-----------------------
.................................................................AGGGGAGGGAGGCGAATT................................................................................................................................................................................................ 181.000.00--------------1.00---------------------------------
.........................GCAAAGGAGCGCGGGAGAG....................................................................................................................................................................................................................................... 1911.001.00---1.00--------------------------------------------
.....................................................................................................................................................................................................................TCCGCCAGCTAAGAGGAGCG.......................................... 2011.001.00--------------------------1.00---------------------
......................................................................................................................................................CTGAATCATTTGGAAAGG........................................................................................................... 1820.500.50---------------------------------------------0.50--