ID: uc010luf.1_intron_32_0_chr8_25226242_f.5p
GENE: DOCK5(33)
chr8:25226192-25226441+


(1)
AGO1.ip 		(13)
BRAIN 		(10)
BREAST 		(15)
CELL-LINE 		(1)
FIBROBLAST 		(2)
HEART 		(5)
LIVER 		(3)
OTHER 		(3)
SKIN 		(2)
UTERUS

Sense strand
ATATGATGCAGTGTGAGTTCAATTTCAGTGGAAATGGCAATTTCCATATGGTAAGAAGTGGCAGACCGCGTAATATTAGTAAATGGACATATAGTCAAATCATAACTCATTTCTTTCTATATAGAGAAGCAGTAACCTTAATAATGCAAGTCCATGTTGATCTGAAAGTTCACTTTACATTTCATTTTATAAAGCAATTAGAGATAGAGTCAGACAGTGCAACCCAGAGCCTGGAAAAGATTTTTTTGCT
.....................................................................................(((.....)))........((((((((((..((.((((((...(((.............)))..........(((..((((((....)))).))..))).)))))).)).....)))))).))))........................................
......................................................................71.........................................................................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189785SRR029131(GSM416760)
MCF7. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577741(Rovira)
total RNA. (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..........................................................................................................................................................................................TTATAAAGCAATTAGACTGA............................................2083.000.005.007.007.00-4.006.003.003.003.005.005.001.002.004.003.001.002.00--1.00--1.00-1.002.002.002.00-2.001.001.00---1.00---1.001.00--1.00-1.00-1.00-1.00-1.00---1.00--
..........................................................................................................................................................................................TTATAAAGCAATTAGACTG.............................................1910.000.002.001.00-3.00---1.00---------1.00---1.00--------------------------------1.00---
..........................................................................................................................................................................................TTATAAAGCAATTAGACTTA............................................207.000.00----3.00---1.00--1.001.00----------1.00----------------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGACT..............................................187.000.00--1.00---1.001.00----1.00---------------1.00-------------1.00-------1.00-------
..........................................................................................................................................................................................TTATAAAGCAATTAGACTT.............................................194.000.00---2.001.00--------------------------1.00--------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGACTGT............................................204.000.00-1.00--------------1.00------1.00------------1.00---------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGAATGA............................................203.000.001.00--------------1.00--------------1.00---------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGACTGC............................................202.000.00-------------------1.00--------------------------1.00-----------
...........................................................................................................................................................................................TATAAAGCAATTAGACTG.............................................182.000.002.00---------------------------------------------------------
......................................................................................................................................................................................................TAGAGATAGAGTCAGACAGT................................2012.002.00--------------------------------2.00-------------------------
...........................................................................TTAGTAAATGGACATGGAT............................................................................................................................................................192.000.00---2.00------------------------------------------------------
.......................................................................................................................................................................................ATTTTATAAAGCAATGAGA................................................192.000.00------------------1.00-------------------------1.00-------------
..........................................................................................................................................................................................TTATAAAGCAATTAGACTAA............................................202.000.00-----------1.00------------1.00---------------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGACTA.............................................192.000.00---------------1.00-----1.00------------------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGTCTG.............................................192.000.001.00-------1.00-------------------------------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGAATG.............................................191.000.00------------------------------------------------1.00---------
..........................................................................................................................................................................................TTATAAAGCAATTAGCCTG.............................................191.000.00-----------1.00----------------------------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGAATGT............................................201.000.00------1.00---------------------------------------------------
................................................................................................................................................................................ACATTTCATTTTATAAACCT......................................................201.000.00---------------------------------------------------------1.00
..........................................................................................................................................................................................TTATAAAGCAATTAGAAAGA............................................201.000.001.00---------------------------------------------------------
.................................................................................................................................................................................................................TCAGACAGTGCAACCCAGAGCC...................2211.001.00--------------------------------------1.00-------------------
........CAGTGTGAGTTCAATTTCAGTGGAAATGG.....................................................................................................................................................................................................................2911.001.00-----------------------------------------1.00----------------
..................TCAATTTCAGTGGAAATGGCAA..................................................................................................................................................................................................................2211.001.00------------------1.00---------------------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGAAATA............................................201.000.001.00---------------------------------------------------------
............................................................................................................................................................................CTTTACATTTCATTTTACG...........................................................191.000.00-----------------1.00----------------------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGAGTGA............................................201.000.00----------------------------1.00-----------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGACTCA............................................201.000.00----------------------1.00-----------------------------------
..............................................................................................................................................................................................AAAGCAATTAGAGATCACA.........................................191.000.00----------------------------------------------------1.00-----
.......................................................................................................................TATAGAGAAGCAGTACCGT................................................................................................................191.000.00---1.00------------------------------------------------------
..........................................................................................................................................................................................TTATAAAGCAATTAGAACGA............................................201.000.00------1.00---------------------------------------------------
.........................................................................................................................TAGAGAAGCAGTAAC..................................................................................................................1580.120.12---------------------------------0.12------------------------

Antisense strand
ATATGATGCAGTGTGAGTTCAATTTCAGTGGAAATGGCAATTTCCATATGGTAAGAAGTGGCAGACCGCGTAATATTAGTAAATGGACATATAGTCAAATCATAACTCATTTCTTTCTATATAGAGAAGCAGTAACCTTAATAATGCAAGTCCATGTTGATCTGAAAGTTCACTTTACATTTCATTTTATAAAGCAATTAGAGATAGAGTCAGACAGTGCAACCCAGAGCCTGGAAAAGATTTTTTTGCT
.....................................................................................(((.....)))........((((((((((..((.((((((...(((.............)))..........(((..((((((....)))).))..))).)))))).)).....)))))).))))........................................
......................................................................71.........................................................................................................................................210......................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189785SRR029131(GSM416760)
MCF7. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577738(Rovira)
total RNA. (breast)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782TAX577740(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		TAX577744(Rovira)
total RNA. (breast)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191478(GSM715588)
30genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577741(Rovira)
total RNA. (breast)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR189786GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................................................................................................................................................................AGACAGTGCAACCCAGTGA.................... 192.000.00--------------------2.00-------------------------------------
..................................................................................................................................................CAAGTCCATGTTGATGTG...................................................................................... 181.000.00-----------------------------------------------------1.00----
..........................................................................................................................................................................................................................GCAACCCAGAGCCTGTTGG............. 191.000.00----------------------------------1.00-----------------------
......................................................................................................................................................................AGTTCACTTTACATTCTG.................................................................. 181.000.00---------------------------------1.00------------------------
..............GAGTTCAATTTCAGTGCT.......................................................................................................................................................................................................................... 181.000.00-------------------------------------1.00--------------------
............................................................................................................................AGAAGCAGTAACCTTGGC............................................................................................................ 181.000.00--------------------------------------------------------1.00-