ID: uc010lsp.1_intron_10_0_chr8_12598506_r.5p
GENE: LONRF1(1)
chr8:12600473-12600722-


(1)
AGO2.ip
(4)
BREAST
(5)
CELL-LINE
(1)
HEART
(1)
OTHER
(8)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
CCATAGAAGATTTAAATGCAGTTCTTTTTCAACTTCCAGATTGGCCTGAGGTAAAATTACTGTTTTATGTTTGCATAAATTGTAAAATTTTAACTATAAGGGACATGCATTCATTCACAGTTAGGAATTTTAACAAAGTAGATGGTTGACTCCAAATAAAATATCTAGTGCTCTAGAAATATAGGTTCACCTAGGTGCAATGGCTCATTTCCATAATCCTAGCAATTTGGGACGCTGAGTTGGACGGATT
...................................................((((((((((((...(((..(((((...(((((..........))))).....)))))..)))..)))))....)))))))......................................................................................................................
..................................................51....................................................................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343337RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR343336SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
...................................................................................................................................AACAAAGTAGATGGTGTA.....................................................................................................1839.000.0031.003.003.00-2.00-------------------
.................................................................................................................................TTAACAAAGTAGATGGTG.......................................................................................................185.000.004.001.00----------------------
...................................................................................................................................AACAAAGTAGATGGTGTAT....................................................................................................194.000.003.00---1.00-------------------
....................................................................................................................................ACAAAGTAGATGGTTGA.....................................................................................................1713.003.00--------2.00------1.00--------
....AGAAGATTTAAATGCGTGA...................................................................................................................................................................................................................................193.000.00-----2.00------------1.00-----
..................CAGTTCTTTTTCAACTTCCAGATTGGCCTGAGG.......................................................................................................................................................................................................3312.002.00---2.00--------------------
...................................................................................................................................AACAAAGTAGATGGTATC.....................................................................................................182.000.00------2.00-----------------
.......................CTTTTTCAACTTCCAGATTGGCCTGAG........................................................................................................................................................................................................2711.001.00----------1.00-------------
....AGAAGATTTAAATGCAGTTCTTTTTCAACTT.......................................................................................................................................................................................................................3111.001.00---------1.00--------------
....................................................................................................................................................ACTCCAAATAAAATACCA....................................................................................181.000.00-------1.00----------------
.................................................................................................................................TTAACAAAGTAGATGGTGTA.....................................................................................................201.000.00--1.00---------------------
.........................................................................................................................TAGGAATTTTAACAAAGTAGATGGTT.......................................................................................................2611.001.00---------------------1.00--
................................CTTCCAGATTGGCCTGAGG.......................................................................................................................................................................................................1911.001.00---1.00--------------------
................................CTTCCAGATTGGCCTGAGGTCT....................................................................................................................................................................................................221.000.00-------1.00----------------
...................................................................................................................................AACAAAGTAGATGGTGATC....................................................................................................191.000.001.00-----------------------
...................................CCAGATTGGCCTGAGGTCT....................................................................................................................................................................................................191.000.00----------------------1.00-
...................................................................................................................................AACAAAGTAGATGGTGGAT....................................................................................................191.000.001.00-----------------------
................................CTTCCAGATTGGCCTGAG........................................................................................................................................................................................................1811.001.00-------------1.00----------
.................................TTCCAGATTGGCCTGAG........................................................................................................................................................................................................1711.001.00-------------------1.00----
........................................................................................................................................................................................................................................CGCTGAGTTGGACGGAT.1711.001.00--------------1.00---------
..................................................................................................................................TAACAAAGTAGATGGTG.......................................................................................................171.000.00-1.00----------------------
.................................................................................................................................TTAACAAAGTAGATGGTGTGT....................................................................................................211.000.001.00-----------------------
..........................................................................................................................................................................................................................CTAGCAATTTGGGACGCTGA............2011.001.00--------------------1.00---
......................................................AATTACTGTTTTATGTT...................................................................................................................................................................................1780.380.38-----------------------0.38

Antisense strand
CCATAGAAGATTTAAATGCAGTTCTTTTTCAACTTCCAGATTGGCCTGAGGTAAAATTACTGTTTTATGTTTGCATAAATTGTAAAATTTTAACTATAAGGGACATGCATTCATTCACAGTTAGGAATTTTAACAAAGTAGATGGTTGACTCCAAATAAAATATCTAGTGCTCTAGAAATATAGGTTCACCTAGGTGCAATGGCTCATTTCCATAATCCTAGCAATTTGGGACGCTGAGTTGGACGGATT
...................................................((((((((((((...(((..(((((...(((((..........))))).....)))))..)))..)))))....)))))))......................................................................................................................
..................................................51....................................................................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343337RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR343336SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR029128(GSM416757)
H520. (cell line)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
...................AGTTCTTTTTCAACTTCCTG................................................................................................................................................................................................................... 201.000.00----------------1.00-------
.....................TTCTTTTTCAACTTCGATT.................................................................................................................................................................................................................. 191.000.00------------1.00-----------
............................................CCTGAGGTAAAATTAAAAT........................................................................................................................................................................................... 191.000.00-----------1.00------------
........................TTTTTCAACTTCCAGTAT................................................................................................................................................................................................................ 181.000.00-----------------1.00------