ID: uc010lpg.2_intron_10_0_chr7_148481170_f.3p
GENE: (11)
chr7:148483443-148483692+


(2)
AGO2.ip 		(11)
B-CELL 		(8)
BRAIN 		(3)
BREAST 		(30)
CELL-LINE 		(2)
CERVIX 		(2)
FIBROBLAST 		(7)
HEART 		(2)
HELA 		(8)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(33)
SKIN 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
TCATAATCTGTTCTTCAGTGTTGAGGTTACAGTATGAGATTGCCAGTTTGCTGTAGGTAAGGAAAGTCAACCTTCCCTCTTCCTCTGCACTAATCTGATGAGAACTGATCTTTTGAATGCTTGAAGCTGCATTCTGGCTAAGTGGTGCTTGTTTAAACGTACTGATGTTTTAAAACATGGTATCTTTTTAAAATTTTCAGTTCCAAGAACCCAGAGGAGGCAGAACTAGAAGACACACTCAATCAAGTGG
......................................................(((.((((........)))).)))....(((..((......))..)))....................................................................................................................................................
..................................................51.............................................................114......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
..........................................................................................TAATCTGATGAGAACTGATC............................................................................................................................................201101.00101.00--13.0016.004.0010.008.008.00--8.00-5.00--2.00----3.002.00-----1.00------1.00----2.00-1.00--1.001.00---2.00-------------------1.001.001.00---1.001.00------1.00-1.00-------------1.00-----1.001.001.001.001.00-
.....................................................TAGGTAAGGAAAGTCGGC...................................................................................................................................................................................1816.000.00-------------5.00--1.00--4.00----2.002.00----------------------------------------1.00---------------------------1.00----------------
.........................................................................................CTAATCTGATGAGAACTGATC............................................................................................................................................21112.0012.00---3.003.00-----------3.00----1.00------------1.00-------------------------------------------------------------1.00--------------
...................................................TGTAGGTAAGGAAAGTCGG....................................................................................................................................................................................197.000.00-----------------------1.00------------2.00--------------1.00----------------------1.00----------------------1.00-----1.00-------
........................................................................................................................................................................................................................GAGGCAGAACTAGAAGACACA.............2117.007.002.001.003.00-----1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TCCAAGAACCCAGAGGAGGCAG...........................2216.006.00--3.00-3.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAGACACA.............2516.006.001.004.00------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGAGGCAGAACTAGAAGACACA.............2416.006.003.00---3.00----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CAGAGGAGGCAGAACTAGAAGACA...............2415.005.001.00-------2.00------------------------1.00----------------1.00------------------------------------------------------------
....................................................GTAGGTAAGGAAAGTCGGC...................................................................................................................................................................................1914.004.00-----------------------1.00----------------------------------------1.00---1.00----------------------1.00-------------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAGACA...............2314.004.001.003.00-------------------------------------------------------------------------------------------------------------
....................................................GTAGGTAAGGAAAGTC......................................................................................................................................................................................1614.004.00--------------------------3.00-------------------------------1.00----------------------------------------------------
...................................................TGTAGGTAAGGAAAGTCGGC...................................................................................................................................................................................204.000.00-------------------------1.00----------------------------------------------------1.00----------1.00---1.00-----------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAGACACAC............2614.004.003.00-------------------------------------------------------------------------------------------------1.00------------
...................................................................................................................................................................................................................CAGAGGAGGCAGAACTAG.....................1814.004.002.00--------2.00-----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CAGAGGAGGCAGAACTAGAAGACACA.............2614.004.001.001.00---------------------------------2.00---------------------------------------------------------------------------
............................................................................................................................................................................................................................CAGAACTAGAAGACACACT...........1913.003.00---------1.00--------------------------------1.00---------------------------------------------------------1.00----------
...............................................................................................................................................................................................................AACCCAGAGGAGGCAGAACT.......................2013.003.002.00----------------1.00---------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGAGGCAGAACTAGAAGACA...............2213.003.00-1.00------------1.00-------------1.00----------------------------------------------------------------------------------
............................................................................................................................................................................................................AAGAACCCAGAGGAGGCAGAACT.......................2313.003.001.00-------------------------------------1.00---------------------1.00--------------------------------------------------
...........................................................................................................................................................................................................................GCAGAACTAGAAGACACACT...........2013.003.00---------------1.00-1.00--------------------1.00------------------------------------------------------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGA.................1913.003.00---------------1.00----------------2.00------------------------------------------------------------------------------
.................................................................................................................................................................................................................CCCAGAGGAGGCAGAACTAGAAGACA...............2613.003.00---------------------------------1.00----------------------------1.00---------------------1.00--------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGACACACT...........2513.003.002.001.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAGACACACT...........2713.003.001.001.00------1.00------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CAGAGGAGGCAGAACTAGAAGACACACT...........2812.002.00-1.00--------------------------------------------------------------------------------1.00----------------------------
..............................................................................................................................................................................................................................GAACTAGAAGACACACTCAATA......222.000.002.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAGACACACTC..........2812.002.001.00----------------------------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................ACCCAGAGGAGGCAGAACTAGAAGACA...............2712.002.00-----------------------------------------------------2.00---------------------------------------------------------
...................................................................................................................................................................................................................CAGAGGAGGCAGAACTAGAAGACATA.............2612.005.001.001.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CAGAGGAGGCAGAACTAGAAGA.................2212.002.001.00---------------------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................................................................................CAGAGGAGGCAGAACTAGAAGACACACTC..........2912.002.00-2.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GAGGCAGAACTAGAAGACA...............1912.002.00--------1.00---------------------------------------------------------------1.00--------------------------------------
.....................................................TAGGTAAGGAAAGTCG.....................................................................................................................................................................................162.000.00---------------------------1.00-------------1.00---------------------------------------------------------------------
........................................................................................................................................................................................................................GAGGCAGAACTAGAAGACACACTCA.........2512.002.001.00-----------------------------------------------------------------------------------------------------1.00--------
.......................................................................................CACTAATCTGATGAGAACTGAT.............................................................................................................................................2212.002.00-------------------------------------1.00-------------------1.00-----------------------------------------------------
................................................................................................................................................................................................................ACCCAGAGGAGGCAGAACTAGAAGAC................2612.002.00---------1.00--------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGACACA.............2312.002.00--------------2.00------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGACA...............2112.002.00----------------------2.00----------------------------------------------------------------------------------------
.....................................................TAGGTAAGGAAAGTCGG....................................................................................................................................................................................172.000.00---------------------------1.00---------------------------------1.00-------------------------------------------------
..........................................................................................TAATCTGATGAGAACTGAT.............................................................................................................................................1912.002.00-------------------------------2.00-------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAGA.................2112.002.002.00--------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................AACTAGAAGACACACTCAATCAA....2312.002.00----2.00----------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AGGCAGAACTAGAAGACA...............1822.002.00---------1.00-----0.50----------------------------------------0.50------------------------------------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGAC................2012.002.00-1.00-------------------------------------------1.00-----------------------------------------------------------------
........................................................................................................................................................................................................................GAGGCAGAACTAGAAGACACACTC..........2411.001.00--------------------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................................AGGCAGAACTAGAAGACACA.............2011.001.00----------------------------------------------1.00----------------------------------------------------------------
............................................................................................................................................................................................................AAGAACCCAGAGGAGGCAGAACTAGAAGACACACT...........3511.001.00------------------------------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................................................................................GCAGAACTAGAAGACACACTC..........2111.001.00-------------------------------------------------------1.00-------------------------------------------------------
...................................................................................................................................................................................................................CAGAGGAGGCAGAACTAGAAGACAC..............2511.001.001.00--------------------------------------------------------------------------------------------------------------
............................................................................................ATCTGATGAGAACTGATC............................................................................................................................................1811.001.00------1.00--------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GAGGCAGAACTAGAAGACACACT...........2311.001.00-1.00-------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AACCCAGAGGAGGCAGAACTAGAA...................2411.001.00-1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................ACCCAGAGGAGGCAGAACTAGAAGACAC..............2811.001.00----1.00----------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GGAGGCAGAACTAGAAGACACACTC..........2511.001.00---------------------------------------------------------------1.00-----------------------------------------------
.....................................................TAGGTAAGGAAAGTCGGCA..................................................................................................................................................................................191.000.00---------------------------------------------------1.00-----------------------------------------------------------
........................................................................TTCCCTCTTCCTCTGCACTAATA...........................................................................................................................................................231.000.001.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAGAC................2211.001.001.00--------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGCAGAACTAGAAGACACACT...........2111.001.00-1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGCAGAACTAGAAGACACACTCA.........2311.001.00--------------1.00------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................AAGAACCCAGAGGAGGCAGAACTA......................2411.001.00----------------------------1.00----------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGCAGAACTAGAAGACACACTCAATC......2611.001.00-----------------------------1.00---------------------------------------------------------------------------------
......................................................................................................................................................................................................AGTTCCAAGAACCCAGAGGAGGC.............................2311.001.00---------------------------------------------------------------------------------------1.00-----------------------
...........................................................................................................................................................................................................................GCAGAACTAGAAGACACAC............1911.001.00-----------------------------------------------------------------------------1.00---------------------------------
.........................................................................................................................................................................................................TCCAAGAACCCAGAGGAGGCAGA..........................2311.001.00--1.00------------------------------------------------------------------------------------------------------------
..........................................................................................TAATCTGATGAGAACTGAGC............................................................................................................................................201.000.00-----1.00---------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GCAGAACTAGAAGACACACTCAA........2311.001.00--------------------------------------------------------------------------------------1.00------------------------
...................................................TGTAGGTAAGGAAAGT.......................................................................................................................................................................................1631.001.00-----------------------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AGAACCCAGAGGAGGCAGAACTAGAAG..................2711.001.00-1.00-------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAACTAGAAGACACACT...........1811.001.00---------1.00-----------------------------------------------------------------------------------------------------
.........................................................................................CTAATCTGATGAGAACTGA..............................................................................................................................................1911.001.00--------------------------------------------1.00------------------------------------------------------------------
............................................................................................................................................................................................................AAGAACCCAGAGGAGGCAGAACTAGAAGAC................3011.001.00-1.00-------------------------------------------------------------------------------------------------------------
.............................CAGTATGAGATTGCCTGCC..........................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------1.00------------------------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAGATA...............2311.002.001.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGAACTAGAAGACACACTCAA........2111.001.001.00--------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGTTCCAAGAACCCAGAGGAGGCAGAACTAGAAGAC................3611.001.00------------------------------------------------------1.00--------------------------------------------------------
.................................................................................................................................................................................................................CCCAGAGGAGGCAGAACTAGAAGACACA.............2811.001.00------------------------------------------------1.00--------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGAGGCAGAACTAGAAGACAC..............2311.001.001.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GAGGCAGAACTAGAAGACACACTCAAT.......2711.001.001.00--------------------------------------------------------------------------------------------------------------
...................................................TGTAGGTAAGGAAAGTCGGCA..................................................................................................................................................................................211.000.00------------------------1.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................AACTAGAAGACACACTCAATCA.....2211.001.00-------------------------------------------------------------------------1.00-------------------------------------
...............................................................................................................................................................................................................AACCCAGAGGAGGCAGAACTAG.....................2211.001.00---------------------------------------------------------------------------------1.00-----------------------------
...........................................................................................................................................................................................................CAAGAACCCAGAGGAGGCAGAACTA......................2511.001.00----------------------------------------------1.00----------------------------------------------------------------
...............................................................................................................................................................................................................AACCCAGAGGAGGCAGAACTAGAAGACATA.............301.000.00-1.00-------------------------------------------------------------------------------------------------------------
...............................GTATGAGATTGCCAGTTT.........................................................................................................................................................................................................1811.001.00-----------------------------------------------1.00---------------------------------------------------------------
............................................................................................................................................................................................................AAGAACCCAGAGGAGGCAGAACTAGAAGA.................2911.001.00-------------------------------------------1.00-------------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGAGGCAGAACTAGAAGACACACT...........2611.001.00-1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................CCCAGAGGAGGCAGAACTAGAAGA.................2411.001.00----------------------------------------1.00----------------------------------------------------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGACACACTC..........2611.001.00-1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGACACACTCAATCA.....3111.001.00-------------------------------------------------------------------------------1.00-------------------------------
........................................................................................................................................................................................................TTCCAAGAACCCAGAGGAGGCAGAACTAGA....................3011.001.00-------------------------------------------------------------------1.00-------------------------------------------
.....................................................................................................................................................................................................................GAGGAGGCAGAACTAGAAGA.................2011.001.00-----------------1.00---------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CAAGAACCCAGAGGAGGCAGA..........................2111.001.00-----------------------------1.00---------------------------------------------------------------------------------
.................................ATGAGATTGCCAGTTAGCT......................................................................................................................................................................................................191.000.001.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGAGGAGGCAGAACTAGAAG..................2011.001.00--------------------------------------------------------------------------------------------------------1.00------
...........................................................................................................................................................................................................................GCAGAACTAGAAGACACACTCAATCAAG...2811.001.00--------1.00------------------------------------------------------------------------------------------------------
.............................CAGTATGAGATTGCCAGTTTGCTGTAGGT................................................................................................................................................................................................2911.001.00--------1.00------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGAGGCAGAACTAGAAGACACAC............2511.001.001.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AGAACCCAGAGGAGGCAGAACCAG.....................241.000.00--------------------------------------------------------------------------------------------1.00------------------
.............................................................................................................................................................................................................AGAACCCAGAGGAGGCAGAACTA......................2311.001.001.00--------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GTTCCAAGAACCCAGAGGAGGCA............................2311.001.00-----------------1.00---------------------------------------------------------------------------------------------
........TGTTCTTCAGTGTTGAGTTTT.............................................................................................................................................................................................................................211.000.00------------------------------------------1.00--------------------------------------------------------------------
................................................................................................................................................................................................................ACCCAGAGGAGGCAGAACTAGAAGA.................2511.001.00-----------------------------------------------------------------------------------------------------1.00---------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGACACACTCA.........2711.001.00------------------1.00--------------------------------------------------------------------------------------------
.............................................................................................................CTTTTGAATGCTTGAAGCTGC........................................................................................................................2111.001.00-------------------------------------1.00-------------------------------------------------------------------------
.........................................................................................CTAATCTGATGAGAACTGAT.............................................................................................................................................2011.001.00-------------------------------------------1.00-------------------------------------------------------------------
..................................................................................................................................................................................................................CCAGAGGAGGCAGAACTAGAAGA.................2311.001.00----------------------------------------1.00----------------------------------------------------------------------
...............................GTATGAGATTGCCAGTTTGCTGTAGGTAAGGA...........................................................................................................................................................................................3211.001.00----------------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AACCCAGAGGAGGCAGAACTAGA....................2311.001.00----1.00----------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AGAACCCAGAGGAGGCAGA..........................1921.001.00-------1.00-------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGACACACTCAATCAAG...3311.001.00------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AGGCAGAACTAGAAGACACACTC..........2311.001.00--------------------------------------------------1.00------------------------------------------------------------
................................................................................................................................................................................................................ACCCAGAGGAGGCAGAACTAGAAGACACA.............2911.001.00------1.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................ACCCAGAGGAGGCAGAACTAGAAGACACACTCA.........3311.001.00-----------------------------------------------1.00---------------------------------------------------------------
...............................................................................................................................................................................................................AACCCAGAGGAGGCAGAACTAGAAGACACA.............3011.001.00-1.00-------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CAAGAACCCAGAGGAGGCAGAACT.......................2411.001.00-----------------------------------------------------------------------------------------------1.00---------------
...........................................................................................AATCTGATGAGAACTGAT.............................................................................................................................................1811.001.00----------------------------------------------------------------------------------------1.00----------------------
..................................................................................................................................................................................................................CCAGAGGAGGCAGAACTAGAA...................2111.001.00---------1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GCAGAACTAGAAGACACA.............1811.001.00----------------------------------------------------1.00----------------------------------------------------------
..........................................................................................................................................................................................................................GGCAGAACTAGAAGACACACTCAATCA.....2711.001.00--------1.00------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CCAGAGGAGGCAGAACTAGAAGACACAC............2811.001.00------------------------------------------------------------------------------------------1.00--------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAGACACACTCAATC......3011.001.00------------------1.00--------------------------------------------------------------------------------------------
..........................................................................................TAATCTGATGAGAACTGATCTT..........................................................................................................................................2211.001.00-----------------------------------------------------------------1.00---------------------------------------------
...............................GTATGAGATTGCCAGTTTGCTGTAGGTAAGG............................................................................................................................................................................................3111.001.00------------------1.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GAGGCAGAACTAGAAGAC................1820.500.50------------------------------0.50--------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AGGCAGAACTAGAAGACAC..............1920.500.50---------0.50-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AACCCAGAGGAGGCAGAAC........................1920.500.50-------------------------------------------------------0.50-------------------------------------------------------
......................................................................................................................................................................................................................AGGAGGCAGAACTAGAAG..................1820.500.50---------0.50-----------------------------------------------------------------------------------------------------
..........................................................................................TAATCTGATGAGAACTGTTC............................................................................................................................................2020.500.50--------------------0.50------------------------------------------------------------------------------------------
..........................................................................................TAATCTGATGAGAACTG...............................................................................................................................................1720.500.50-------------------------------0.50-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGAGGCAGAACTAG.....................1650.200.20--------------------------------------------------------------------------------------------------------------0.20
...............................................................................................TGATGAGAACTGATC............................................................................................................................................1590.110.11---------------------0.11-----------------------------------------------------------------------------------------

Antisense strand
TCATAATCTGTTCTTCAGTGTTGAGGTTACAGTATGAGATTGCCAGTTTGCTGTAGGTAAGGAAAGTCAACCTTCCCTCTTCCTCTGCACTAATCTGATGAGAACTGATCTTTTGAATGCTTGAAGCTGCATTCTGGCTAAGTGGTGCTTGTTTAAACGTACTGATGTTTTAAAACATGGTATCTTTTTAAAATTTTCAGTTCCAAGAACCCAGAGGAGGCAGAACTAGAAGACACACTCAATCAAGTGG
......................................................(((.((((........)))).)))....(((..((......))..)))....................................................................................................................................................
..................................................51.............................................................114......................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444065(SRX128913)
Sample 22cDNABarcode: AF-PP-335: ACG CTC TTC . (cell line)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR038856(GSM458539)
D11. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
..............................................................................................................TTTTGAATGCTTGAAGCTAAGG...................................................................................................................... 225.000.00-----------5.00---------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGTTCCAAGAACCCACTG.................................. 182.000.00------------------------------1.00---------------------1.00----------------------------------------------------------
................AGTGTTGAGGTTACACAG........................................................................................................................................................................................................................ 181.000.00-----------------------------------------------------------1.00---------------------------------------------------
......................................................................................................................................................................................................AGTTCCAAGAACCCAGACTG................................ 201.000.00------------------------------1.00--------------------------------------------------------------------------------
..........TTCTTCAGTGTTGAGGTAAT............................................................................................................................................................................................................................ 201.000.001.00--------------------------------------------------------------------------------------------------------------