ID: uc010lad.2_intron_9_0_chr7_66053568_r.3p
GENE: (1)
chr7:66053518-66053767-


(2)
B-CELL 		(2)
BRAIN 		(14)
BREAST 		(8)
CELL-LINE 		(1)
CERVIX 		(3)
LIVER 		(1)
OTHER 		(12)
SKIN 		(1)
UTERUS

Sense strand
TGGTCACTTTTGAGAATCAAAGGGGGTGCTTTTAGGCCAGGACTGTTGCTTGCTAACTGGGGTGTATGATTGCCCTATTTGTAAAGAATAAGTGATGCTGTGAACCCAGAGTTCGATGTAAATTTGTGGAAAACTCATTTCTTCTAATTATTTGTAGAGTTTACAACAATTCTTATTGGATGGTATGTTTTTTTCCCTAGGGCTGCTGTAAAATATTACAGGCATACTTTGGAGATGTTATGGGTTTGGT
........................................................(((((...(((....((..(((((((.....)))))))..)).)))..))))).............................................................................................................................................
........................................................57.................................................................124............................................................................................................................
SizePerfect hitTotal NormPerfect NormTAX577745(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343335SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................ACCCAGAGTTCGATGGA..................................................................................................................................173150.670.6740.0021.0014.3313.0015.6711.679.004.006.007.005.332.00----------1.00------0.67---------------
......................................................................................................AACCCAGAGTTCGATGGA..................................................................................................................................1835.000.006.002.005.005.00-1.001.006.002.00-1.00-2.002.00------1.00--1.00---------------------
..................................................................................AAAGAATAAGTGATGCTGTGAACCCAGAG...........................................................................................................................................2912.002.00--------------2.00------------------------------
.......................................................................................................ACCCAGAGTTCGATGGAT.................................................................................................................................1832.000.67------------0.67--------------1.00-------------0.33---
.......................................................................................................ACCCAGAGTTCGATGTA..................................................................................................................................1732.002.000.330.67-0.330.33--0.33-------------------------------------
.......................................................................................................ACCCAGAGTTCGATGGT..................................................................................................................................1731.330.670.33--0.67--0.33--------------------------------------
.......................................................................................................ACCCAGAGTTCGATGGC..................................................................................................................................1731.330.670.33-0.67------0.33-----------------------------------
.............................................................GTGTATGATTGCCCTATTTGT........................................................................................................................................................................2121.001.00-------------------------1.00-------------------
.............................TTTTAGGCCAGGACTGTTGCTTGCTAACCGG..............................................................................................................................................................................................311.000.00---------------1.00-----------------------------
...................AAGGGGGTGCTTTTATTTT....................................................................................................................................................................................................................191.000.00-----1.00---------------------------------------
...................AAGGGGGTGCTTTTATTT.....................................................................................................................................................................................................................181.000.00-----------------1.00---------------------------
......................................................................................................................................................................................................AGGGCTGCTGTAAAATCCT.................................191.000.00------------------1.00--------------------------
......................................................................................................AACCCAGAGTTCGATGGC..................................................................................................................................181.000.00-----------1.00---------------------------------
.......................................................................................................ACCCAGAGTTCGATGTC..................................................................................................................................171.000.00-1.00-------------------------------------------
......................................................................................................AACCCAGAGTTCGATGGATC................................................................................................................................201.000.00-------------------1.00-------------------------
...........................................................................................................................................................................................................................AGGCATACTTTGGAGATTT............191.000.00------------------------1.00--------------------
......................................................................................AATAAGTGATGCTGTAAC..................................................................................................................................................181.000.00----------------1.00----------------------------
...........................................................................................................................................TCTTCTAATTATTTGCATT............................................................................................191.000.00---------------1.00-----------------------------
...............................TTAGGCCAGGACTGTTGCTGC......................................................................................................................................................................................................211.000.00---------------------1.00-----------------------
.......................................................................................................ACCCAGAGTTCGATGGATC................................................................................................................................1930.670.67-----------------------------------0.33---0.33-----
.......................................................................................................ACCCAGAGTTCGATG....................................................................................................................................1530.670.67------------------------------------0.33-----0.33--
.......................................................................................................ACCCAGAGTTCGATGGG..................................................................................................................................1730.670.67-0.33-0.33-----------------------------------------
.......................................................................................................ACCCAGAGTTCGATGCA..................................................................................................................................1730.670.670.33---0.33----------------------------------------
......................................................................................................AACCCAGAGTTCGAT.....................................................................................................................................1540.500.50------------------------------0.50--------------
......................................AGGACTGTTGCTTGCTAACTGGGGTGTAT.......................................................................................................................................................................................2920.500.50---------------------------------0.50-----------
...................AAGGGGGTGCTTTTAGGCCAGGACTGT............................................................................................................................................................................................................2720.500.50-------------------------------0.50-------------
....CACTTTTGAGAATCAAAGGGG.................................................................................................................................................................................................................................2120.500.50--------------------------------0.50------------
..................................................................................................................................................................ACAACAATTCTTATTG........................................................................1650.400.40----------------------------------0.40----------
.......................................................................................................ACCCAGAGTTCGATGGATT................................................................................................................................1930.330.67-------------------------------------0.33-------
.......................................................................................................ACCCAGAGTTCGATGGATA................................................................................................................................1930.330.67-------------------------------------------0.33-
............................CTTTTAGGCCAGGACTGTTGCTTGCT....................................................................................................................................................................................................2630.330.33--------------------------------------0.33------
.......................................................................................................ACCCAGAGTTCGATGGATG................................................................................................................................1930.330.67----------------------------------------0.33----
......................................................................................................AACCCAGAGTTCGATGTA..................................................................................................................................1830.330.33--0.33------------------------------------------
..............................TTTAGGCCAGGACTGT............................................................................................................................................................................................................1650.200.20--------------------------------------------0.20

Antisense strand
TGGTCACTTTTGAGAATCAAAGGGGGTGCTTTTAGGCCAGGACTGTTGCTTGCTAACTGGGGTGTATGATTGCCCTATTTGTAAAGAATAAGTGATGCTGTGAACCCAGAGTTCGATGTAAATTTGTGGAAAACTCATTTCTTCTAATTATTTGTAGAGTTTACAACAATTCTTATTGGATGGTATGTTTTTTTCCCTAGGGCTGCTGTAAAATATTACAGGCATACTTTGGAGATGTTATGGGTTTGGT
........................................................(((((...(((....((..(((((((.....)))))))..)).)))..))))).............................................................................................................................................
........................................................57.................................................................124............................................................................................................................
SizePerfect hitTotal NormPerfect NormTAX577745(Rovira)
total RNA. (breast)		TAX577739(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		TAX577740(Rovira)
total RNA. (breast)		TAX577589(Rovira)
total RNA. (breast)		TAX577746(Rovira)
total RNA. (breast)		TAX577742(Rovira)
total RNA. (breast)		TAX577453(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577580(Rovira)
total RNA. (breast)		TAX577588(Rovira)
total RNA. (breast)		SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR343335SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029130(GSM416759)
DLD2. (cell line)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................GTAAAGAATAAGTGACTT........................................................................................................................................................ 181.000.00----------------------------1.00----------------