ID: uc010kyl.2_intron_1_0_chr7_44838504_f
GENE: (2)
chr7:44838454-44838895+


(1)
AGO1.ip 		(1)
AGO2.ip 		(11)
B-CELL 		(1)
BRAIN 		(6)
BREAST 		(21)
CELL-LINE 		(1)
CERVIX 		(4)
HEART 		(3)
HELA 		(7)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
UTERUS 		(2)
XRN.ip

Sense strand
TTTACCCCTGATCGTGCAGCAGTGCTTGCTGTTCCTTAGAATTTTGCCTTGTAAGTTCTAGCTCAAGTTGGGGGGTGGTGATAGACATTTAAGAAGCCATATATCTTTTCAGAAGTAGGTGTGATGTACTAAAAGTTTGAGACACTTTCTAGAAGTCTCACTATTTAAGTTATGACTAGTATTGGATTTTTGGCATGTCTTTGGGTTTCATGTTTCTTAACCCAACTGCCTGCAGGGCCTTATGGCTGTCAGGAGCAGTTCTTGGGAATTAAAGTAATTACTGAAGAAGTATTCTAGTGAGAAAATGAATTTATGACTCAGAAGCCCCTAAAGACATGGGTACTAAGCAACAAAATAAGCAGATGTTAATTAACTGTAATTTTCTCTTACAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGGTTGGTCCATTTTCTAAGT
................................................................................................................................((((((((..((.((.((....)).((((..(((.....)))...)))).)).))..)))))))).........................................................................................................................................................................................................................................................
..............................................................................................................................127...................................................................197...................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR040029(GSM532914)
G026T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		TAX577740(Rovira)
total RNA. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
...................................................................................................................................AAAGTTTGAGACACTCCGA....................................................................................................................................................................................................................................................................................................1920.000.00--7.00-----2.002.003.00----1.00----------------1.00------1.00-----1.00-----1.00---1.00------------------
........................................................................................................................................................................................................................................................................................................................................TAAAGACATGGGTACTAAGCAACAAAATAAGCAGATGTTAATTAACTGTAATTTTCTCTTACAG..................................................64110.0010.0010.00-------------------------------------------------------------------------
...................................................................................................................................AAAGTTTGAGACACTCCG.....................................................................................................................................................................................................................................................................................................186.000.00--2.00-----1.00------1.00------------------------1.00-------1.00-------------------------
..........................................................................................................................................................................................................................................................................................................................................AAGACATGGGTACTAAGCAACAAAATAAGCAGATGTTAATTAACTGTAATTTTCTCTTACAG..................................................6213.003.003.00-------------------------------------------------------------------------
...........................................................................................................................................................................ATGACTAGTATTGGATTTTTGG.........................................................................................................................................................................................................................................................2213.003.00---3.00----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................GTGAGAAAATGAATTTATGAC.............................................................................................................................2112.002.00-----------2.00--------------------------------------------------------------
.......................................................................................................................................................................................GGATTTTTGGCATGTCTTTGGGTT...........................................................................................................................................................................................................................................2412.002.00-2.00------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................TTAATTAACTGTAATTTTCTCTTA.....................................................2412.002.00---2.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AATTAACTGTAATTTTCTCTTA.....................................................2212.002.00----------------2.00---------------------------------------------------------
.......................................................................................................................................TTTGAGACACTTTCTAGAAG...............................................................................................................................................................................................................................................................................................2012.002.00---2.00----------------------------------------------------------------------
.......................................................................................................................................................................AGTTATGACTAGTATTGGATTTTTGGC........................................................................................................................................................................................................................................................2712.002.00-------2.00------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGGTCCCAAAGACAGCA....................2141.251.25-----1.000.25-------------------------------------------------------------------
..................................................................................................................................................................................GTATTGGATTTTTGGCATGTCTTT................................................................................................................................................................................................................................................2411.001.00------------------------------------1.00-------------------------------------
.......CTGATCGTGCAGCAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00----------------------------1.00---------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................AGACATGGGTACTAAGCAACAAAATA.....................................................................................2611.001.00-----------------1.00--------------------------------------------------------
.....................................................................................................................................................................................TTGGATTTTTGGCATGTCTTTGGGTT...........................................................................................................................................................................................................................................2611.001.00-1.00------------------------------------------------------------------------
...............................................................................................................................................................................CTAGTATTGGATTTTTGGC........................................................................................................................................................................................................................................................1911.001.00--------------------1.00-----------------------------------------------------
..............................................................TCAAGTTGGGGGGTGGTGATAGACAT..................................................................................................................................................................................................................................................................................................................................................................2611.001.00-------------------------------------------------1.00------------------------
.TTACCCCTGATCGTGCAGCAGTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00----------------------1.00---------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................AATAAGCAGATGTTAATTAACTGTAA...............................................................2611.001.00------------------------------------------1.00-------------------------------
.....................................................................................................TATCTTTTCAGAAGTAGGTGTGATGTACAA.......................................................................................................................................................................................................................................................................................................................301.000.00-1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................CAAAATAAGCAGATGGATT.........................................................................191.000.00---------------------------------1.00----------------------------------------
......................................................................................................................................................................................................................................................................................................TAGTGAGAAAATGAATTT..................................................................................................................................1811.001.00------------------------1.00-------------------------------------------------
.TTACCCCTGATCGTGCAGCAGTGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00----------------------------------------------1.00---------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCAGACAAGGTCT...............................171.000.00-------------------------------------1.00------------------------------------
............................................................................................................................................................................TGACTAGTATTGGATTTTTG..........................................................................................................................................................................................................................................................2011.001.00-----------------------------------1.00--------------------------------------
.........................................................................................................................................................................................................................................................................................................TGAGAAAATGAATTTATGACT............................................................................................................................2111.001.00--------------------------1.00-----------------------------------------------
..TACCCCTGATCGTGCAGCAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-1.00------------------------------------------------------------------------
................................................................................................................................................................................................................................................TATGGCTGTCAGGAGCA.........................................................................................................................................................................................1711.001.00---1.00----------------------------------------------------------------------
.......................................................................................................TCTTTTCAGAAGTAGGTGTGATGTACCA.......................................................................................................................................................................................................................................................................................................................281.000.00-1.00------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................GTGAGAAAATGAATTTATGACTCAGAAGCCC...................................................................................................................3111.001.00------------------1.00-------------------------------------------------------
......................................................................................................................................................................AAGTTATGACTAGTATTGGATTTTTGG.........................................................................................................................................................................................................................................................2711.001.00-----------------------------------------------1.00--------------------------
.........................................................................................................................................................................................ATTTTTGGCATGTCTTTGGGTTTC.........................................................................................................................................................................................................................................2411.001.00-1.00------------------------------------------------------------------------
.............................................................................................................................................................................................................................................CCTTATGGCTGTCAGGAGC..........................................................................................................................................................................................1911.001.00-----------------------------1.00--------------------------------------------
..................................................................................................................................................................................................................................................TGGCTGTCAGGAGCAGTTCTTGGGAATC............................................................................................................................................................................281.000.00----1.00---------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................CTAGTGAGAAAATGAATTTATGACTCAGAAGC.....................................................................................................................3211.001.00-------------------1.00------------------------------------------------------
.................................................................................................................................................................................AGTATTGGATTTTTGGCATA.....................................................................................................................................................................................................................................................201.000.00-----1.00--------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................TAAAGACATGGGTACTAAGCAA............................................................................................2211.001.00--------------------------------------------------1.00-----------------------
.........................................................................................................................................................................................................................................................................................................................................................AGCAACAAAATAAGCAGA...............................................................................1811.001.00-------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................AAAGACATGGGTACTAAGCAACAA.........................................................................................2411.001.00----------------------------------------------------1.00---------------------
.....................................................................................................................................................................................................................TTCTTAACCCAACTGCCTGCAGGGCC...........................................................................................................................................................................................................2611.001.00----1.00---------------------------------------------------------------------
.................................................................................................................................................................................AGTATTGGATTTTTGGCATG.....................................................................................................................................................................................................................................................2011.001.00------1.00-------------------------------------------------------------------
...................................................................................................................................AAAGTTTGAGACACTCC......................................................................................................................................................................................................................................................................................................171.000.00---------1.00----------------------------------------------------------------
...........................................................................................................TTCAGAAGTAGGTGTGAT.............................................................................................................................................................................................................................................................................................................................1811.001.00-------------1.00------------------------------------------------------------
....................................................................................................................................................................................ATTGGATTTTTGGCATGTCTTGGG..............................................................................................................................................................................................................................................241.000.00-1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AATTAACTGTAATTTTCTCTTACAG..................................................2511.001.00--------------1.00-----------------------------------------------------------
..........................................................................................................TTTCAGAAGTAGGTGTGATGTA..........................................................................................................................................................................................................................................................................................................................2211.001.00------1.00-------------------------------------------------------------------
.................................................................................................................................................................................AGTATTGGATTTTTGGCATGTCTTTGGGTTTC.........................................................................................................................................................................................................................................3211.001.00-1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................CAAAATAAGCAGATGTTAATTAACTGTAATT.............................................................3111.001.00------------------1.00-------------------------------------------------------
.................................................................................................................................................................TATTTAAGTTATGACTAGTATTGG.................................................................................................................................................................................................................................................................2411.001.00-1.00------------------------------------------------------------------------
.................................................................................................................................................................................................................................................ATGGCTGTCAGGAGCAGTTCTGGG.................................................................................................................................................................................241.000.00----1.00---------------------------------------------------------------------
..................................................................................................................................................................................................................................................TGGCTGTCAGGAGCAGTTCTTGGGA...............................................................................................................................................................................2511.001.00-1.00------------------------------------------------------------------------
......CCTGATCGTGCAGCAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00------------1.00-------------------------------------------------------------
.................................................................................................................................................................................................................................................................GTTCTTGGGAATTAAAGTAATTACTGAAGAAG.........................................................................................................................................................3211.001.00------------1.00-------------------------------------------------------------
.................................................................................................................................................................................................CATGTCTTTGGGTTTCATGTT....................................................................................................................................................................................................................................2111.001.00--------------------------------------------1.00-----------------------------
..................................................................................................................................................................ATTTAAGTTATGACTAGTATTGGATTTTTGGC........................................................................................................................................................................................................................................................3211.001.00-------1.00------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................AGATGTTAATTAACTGTAATTTTCTC........................................................2611.001.00--------------------------------------1.00-----------------------------------
...................................................................................................................................................................................TATTGGATTTTTGGCATGTCTTTGGGTTC..........................................................................................................................................................................................................................................291.000.00----1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................TTAACTGTAATTTTCTCTTACGAT.................................................241.000.00-----------------------------------------------------1.00--------------------
.................................................................................................................................................................................................................................................ATGGCTGTCAGGAGCAGTTCTCGGG................................................................................................................................................................................251.000.00----1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................ATGTTTCTTAACCCAACTGCCTGCAGGG.............................................................................................................................................................................................................2811.001.00------1.00-------------------------------------------------------------------
.............................................................................................................CAGAAGTAGGTGTGATGTAC.........................................................................................................................................................................................................................................................................................................................2011.001.00-----------------1.00--------------------------------------------------------
................................................................................................................................................................................................................................................TATGGCTGTCAGGAGCAGTTCTGGGG................................................................................................................................................................................261.000.00----1.00---------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AATTAACTGTAATTTTCTCTTACAT..................................................251.000.00---------------------------1.00----------------------------------------------
..........................................................................................................................................................................................................................................................AGGAGCAGTTCTTGGGAATT............................................................................................................................................................................2011.001.00-----------------------1.00--------------------------------------------------
..................................................................................................................................................................................................................................................................................................................GAATTTATGACTCAGAAGCC....................................................................................................................2011.001.00---------------------1.00----------------------------------------------------
......................................................................................................................................................................................................................................................................TGGGAATTAAAGTAATTACTGAAGAA..........................................................................................................................................................2611.001.00-----1.00--------------------------------------------------------------------
.....CCCTGATCGTGCAGCAGTGCTTGCTGTTCCT......................................................................................................................................................................................................................................................................................................................................................................................................................3111.001.00------------------------------------------------------1.00-------------------
.........................................................................................................................................................................................................................................................................................................................................................................GATGTTAATTAACTGTAATTTTCTCT.......................................................2611.001.00-------------------------------------------1.00------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGACAAGGTCCTCA............................181.000.00-------------------------------1.00------------------------------------------
.................................................................................................................................................................................AGTATTGGATTTTTGGCATGT....................................................................................................................................................................................................................................................2111.001.00-----1.00--------------------------------------------------------------------
..............................................................................................................................................................................................TGGCATGTCTTTGGGTTTCA........................................................................................................................................................................................................................................2011.001.00----------------------------------1.00---------------------------------------
....................................................................................................................................................................................ATTGGATTTTTGGCACG.....................................................................................................................................................................................................................................................171.000.00------------------------------1.00-------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................AATTAACTGTAATTTTCTCT.......................................................2011.001.00-------------1.00------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGTCCCAAAGACAGCAGGTTGG..............2511.001.00---1.00----------------------------------------------------------------------
....CCCCTGATCGTGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1511.001.00-----------------------------------------1.00--------------------------------
................................................................................ATAGACATTTAAGAAGCCATATATCTTTCAG...........................................................................................................................................................................................................................................................................................................................................311.000.00-------------------------1.00------------------------------------------------
.................................................................................................................................................................................................................................................ATGGCTGTCAGGAGCAGTTTGGG..................................................................................................................................................................................231.000.00----1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGGTCCCAAAGACAGC.....................2040.750.75----------------------------------------------------------0.50------------0.25--
.......................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTGCAGACAAGGTCC...............................2030.670.67---------------------------------------------------------0.67----------------
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCAGACAAGGTCCCAAA...........................2130.670.67-----0.67--------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAGACAAGGTCCCAAAGACAGCA....................2430.670.67-----0.33---------------------------------------------------------0.33----------
......................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCCAAAGACAGCAG...................1750.600.60-----------0.20--------0.20---------------------------------------------------0.20-
.....................................................................................................................................................................................TTGGATTTTTGGCATG.....................................................................................................................................................................................................................................................1620.500.50-----------------------------------------------------------0.50--------------
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCAGACAAGGTCCCAAAGAC........................2430.330.33----------------------0.33---------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CAGACAAGGTCCCAAAGA.........................1830.330.33--------------------0.33-----------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................AGACAAGGTCCCAAAGACAGC.....................2130.330.33---------------------0.33----------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................AGACAAGGTCCCAAAGAC........................1830.330.33--------------------------------------------------------------------0.33-----
............................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGACAAGGTCCCAAAGACAGC.....................2530.330.33-----------------------------------------------------------------0.33--------
...............................................................................................................................................................................................................................................TTATGGCTGTCAGGAG...........................................................................................................................................................................................1630.330.33-------------------------------------------------------------------0.33------
...............................................................................................................................................................................................................................................................................................................................................................................................................CAGACAAGGTCCCAAAGACAGCAG...................2430.330.33------------------------------------------------------------0.33-------------
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGCAGACAAGGTCCCAAAGA.........................2430.330.33----------------------------------------------------------------0.33---------
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCAGACAAGGTCCCAAAGACA.......................2530.330.33---------------------0.33----------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAGACAAGGTCCCAAAGACAGC.....................2330.330.33-----------------------0.33--------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTGCAGACAAGGTCC...............................1930.330.33--------------------------------------------------------------0.33-----------
..............................................................................................................................................................................................................................................................................................................................................................................................................GCAGACAAGGTCCCAAAGACAGCAG...................2530.330.33-------------------------------------------------------------0.33------------
........................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTGCAGACAAGGTCCCA.............................2130.330.33------------------------------------------------------------------0.33-------
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGACAAGGTCCCAAAGACAGCAG...................2830.330.33--------------------------------------------------------0.33-----------------
................................................................................................................................................................................................................................................................................................................................................................................................................AGACAAGGTCCCAAAGACAGCA....................2230.330.33------0.33-------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................AGACAAGGTCCCAAAGACA.......................1930.330.33----------------------------------------------------------------------0.33---
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCAGACAAGGTCCCAAAGACAG......................2630.330.33------------------------0.33-------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTGCAGACAAGGTCCCAAAG..........................2430.330.33--------------------0.33-----------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................CAGACAAGGTCCCAAAGACAGC.....................2230.330.33---------------------------------------------------------------------0.33----
........................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTGCAGACAAGGT.................................1760.330.33--------------------------------------------------------0.33-----------------
...................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGTCCCAAAGACA.......................1670.140.14------------------------------------------------------------0.14-------------
....................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTCCCAAAGACAG......................1690.110.11-------------------------------------------------------------------------0.11

Antisense strand
TTTACCCCTGATCGTGCAGCAGTGCTTGCTGTTCCTTAGAATTTTGCCTTGTAAGTTCTAGCTCAAGTTGGGGGGTGGTGATAGACATTTAAGAAGCCATATATCTTTTCAGAAGTAGGTGTGATGTACTAAAAGTTTGAGACACTTTCTAGAAGTCTCACTATTTAAGTTATGACTAGTATTGGATTTTTGGCATGTCTTTGGGTTTCATGTTTCTTAACCCAACTGCCTGCAGGGCCTTATGGCTGTCAGGAGCAGTTCTTGGGAATTAAAGTAATTACTGAAGAAGTATTCTAGTGAGAAAATGAATTTATGACTCAGAAGCCCCTAAAGACATGGGTACTAAGCAACAAAATAAGCAGATGTTAATTAACTGTAATTTTCTCTTACAGCTGTTTGCAGACAAGGTCCCAAAGACAGCAGGTTGGTCCATTTTCTAAGT
................................................................................................................................((((((((..((.((.((....)).((((..(((.....)))...)))).)).))..)))))))).........................................................................................................................................................................................................................................................
..............................................................................................................................127...................................................................197...................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR207119(GSM721081)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR040029(GSM532914)
G026T. (cervix)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM359176(GSM359176)
hela_chip_smrna_pure. (hela)		TAX577740(Rovira)
total RNA. (breast)		SRR038855(GSM458538)
D10. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM359178(GSM359178)
hela_nucl_t. (hela)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577579(Rovira)
total RNA. (breast)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
.........................................................................................................................................TGAGACACTTTCTAGAAGTGTAG.......................................................................................................................................................................................................................................................................................... 231.000.00-1.00------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................AAGCAACAAAATAAGCTATG.............................................................................. 201.000.00----1.00---------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................AAGTATTCTAGTGAGAAAGTG....................................................................................................................................... 211.000.00--------------1.00-----------------------------------------------------------
..............................................................................................................................TCTCAAACTTTTAGTA............................................................................................................................................................................................................................................................................................................ 1640.250.25-------------------------0.25------------------------------------------------