ID: uc010kug.2_intron_3_0_chr7_20201494_r.3p
GENE: (1)
chr7:20201444-20201693-


(2)
B-CELL
(2)
BREAST
(2)
CELL-LINE
(5)
CERVIX
(4)
LIVER
(2)
OTHER
(2)
SKIN

Sense strand
GGAATTTGATCATTTTTTAGTGGAGTGCTAACACATATTTTAGTATATCTAGTCGAGTATCCTACCAGGAGTAGAAGATTTATATAGAGGATTTTCACATGTAGTTCTTTATAGAAATACGTATGATGTCTTTGAGTTTATTTTCTCTGCCAGCCTGTATATGTATGCTTACAAAAAATACTTATCTATTTACTTTGTAGGTGGAAAAATGCTAATCACTGAAAGAAAACATTTTCGGTCAGGAAGAATT
........................................................................(((((((..((...((((((..(((.(((((.((((....)))).))))).))).))))))..))..)))))))..........((((.((((....))))....)))).....................................................................
.......................................................................72..............................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR040039(GSM532924)
G531T. (cervix)
SRR040038(GSM532923)
G531N. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040035(GSM532920)
G001T. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
............................................................................GATTTATATAGAGGAGACA...........................................................................................................................................................1930.000.0021.005.00--1.00--2.00---1.00-------
..................................................................................................................................................................GTATGCTTACAAAAAGTC......................................................................188.000.00--3.004.00----------1.00----
............................................................................GATTTATATAGAGGAGAC............................................................................................................................................................185.000.001.002.00--2.00--------------
.................................................................CAGGAGTAGAAGATTTATATAGAG.................................................................................................................................................................2412.002.00------2.00------------
......................................................................................................................................................................................................................ATCACTGAAAGAAAACATT.................1921.501.50--------1.50----------
..................................................................................................................................................................................................................................AAACATTTTCGGTCAGGA......1811.001.00---------1.00---------
............................................................................GATTTATATAGAGGAGAAA...........................................................................................................................................................191.000.00-1.00-----------------
..............................................................................................................................................................................................................................AAGAAAACATTTTCGGTCAGGAAGAATT2811.001.00---------------1.00---
.........................................................................................................................................................................................................TGGAAAAATGCTAATCACTGAAAG.........................2411.001.00-------------1.00-----
.............................................................................................................................................................................................................AAAATGCTAATCACTGAAAGAA.......................2211.001.00----------------1.00--
...........................CTAACACATATTTTATTAC............................................................................................................................................................................................................191.000.00------------------1.00
..................................................................AGGAGTAGAAGATTTCATA.....................................................................................................................................................................191.000.00--1.00----------------
..................................................................................................................................................................GTATGCTTACAAAAATTC......................................................................181.000.00------------1.00------
.................................................................CAGGAGTAGAAGATTTTG.......................................................................................................................................................................181.000.00-----------------1.00-
...............................................................................................................................................TCTCTGCCAGCCTGTACTG........................................................................................191.000.00----------1.00--------
............................................................................GATTTATATAGAGGAGTTG...........................................................................................................................................................191.000.001.00------------------

Antisense strand
GGAATTTGATCATTTTTTAGTGGAGTGCTAACACATATTTTAGTATATCTAGTCGAGTATCCTACCAGGAGTAGAAGATTTATATAGAGGATTTTCACATGTAGTTCTTTATAGAAATACGTATGATGTCTTTGAGTTTATTTTCTCTGCCAGCCTGTATATGTATGCTTACAAAAAATACTTATCTATTTACTTTGTAGGTGGAAAAATGCTAATCACTGAAAGAAAACATTTTCGGTCAGGAAGAATT
........................................................................(((((((..((...((((((..(((.(((((.((((....)))).))))).))).))))))..))..)))))))..........((((.((((....))))....)))).....................................................................
.......................................................................72..............................................................................................................184................................................................
SizePerfect hitTotal NormPerfect NormSRR040039(GSM532924)
G531T. (cervix)
SRR040038(GSM532923)
G531N. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR040035(GSM532920)
G001T. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR189784SRR040040(GSM532925)
G612N. (cervix)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
............................................................................................................................................................GTATATGTATGCTTACATATG......................................................................... 211.000.00-----1.00-------------
.............................................................................................................TATAGAAATACGTATGTACG......................................................................................................................... 201.000.00-----1.00-------------