ID: uc010kkw.1_intron_22_0_chr6_170072493_r.3p
GENE: (2)
chr6:170072443-170072692-


(5)
CELL-LINE
(2)
HEART
(1)
KIDNEY
(1)
LIVER
(3)
OTHER
(1)
SKIN

Sense strand
AATAGCAGTGAAATGGTTAACTTGAGAGAATAATTTAGTAGTACATAGCAGGGATTTTAACAAATGAATTAACAATGAATATGTAAGATAAATGTATTTGAAAAACTCAATCTTTTAATTTCTTAGGTTTGAAGTTATGTTGTTATACTCTTATTTTTAAATGTCTGTGATCTGTGTTTTATTTTTGTTAATTTTCCCAGCTTCTAATCCTACGAGGACACCATCAGCCAATTACTGCTATGGCTTTTGG
..............................................................................................((((((((((...........(((((((........))))))).((......)).....)))))))))).......................................................................................
.....................................................................................86...............................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR189785SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
................................................................................................................................................ATACTCTTATTTTTATTTG.......................................................................................1950.000.0021.0014.008.007.00---------
................................................................................................................................................ATACTCTTATTTTTATCTG.......................................................................................194.000.002.002.00-----------
.....................................................................................................................................................................................................................GAGGACACCATCAGCCAATTACTG.............2411.001.00----1.00--------
.......................................................................................................................................................................................................................................TTACTGCTATGGCTTTTGG1911.001.00-----1.00-------
.............................ATAATTTAGTAGTACTCTG..........................................................................................................................................................................................................191.000.00----------1.00--
...............GTTAACTTGAGAGAATTCTG.......................................................................................................................................................................................................................201.000.00-------1.00-----
................................................................................................................................................ATACTCTTATTTTTATTCG.......................................................................................191.000.001.00------------
................................................................................................................................................ATACTCTTATTTTTATTG........................................................................................181.000.00---------1.00---
..........................................................................................AATGTATTTGAAAAACCATT............................................................................................................................................201.000.00-----------1.00-
.........................................................................................................................................................................ATCTGTGTTTTATTTTTGTT.............................................................2020.500.50------------0.50

Antisense strand
AATAGCAGTGAAATGGTTAACTTGAGAGAATAATTTAGTAGTACATAGCAGGGATTTTAACAAATGAATTAACAATGAATATGTAAGATAAATGTATTTGAAAAACTCAATCTTTTAATTTCTTAGGTTTGAAGTTATGTTGTTATACTCTTATTTTTAAATGTCTGTGATCTGTGTTTTATTTTTGTTAATTTTCCCAGCTTCTAATCCTACGAGGACACCATCAGCCAATTACTGCTATGGCTTTTGG
..............................................................................................((((((((((...........(((((((........))))))).((......)).....)))))))))).......................................................................................
.....................................................................................86...............................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR189787SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR189785SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................TTAACAATGAATATGGGA.................................................................................................................................................................... 181.000.00--------1.00----
..........................................ACATAGCAGGGATTTTAACATGT......................................................................................................................................................................................... 231.000.00------1.00------