ID: uc010kit.1_intron_0_0_chr6_152265644_f.3p
GENE: ESR1(1)
chr6:152381926-152382175+


(1)
BREAST 		(10)
CELL-LINE 		(4)
CERVIX 		(1)
HEART 		(1)
KIDNEY 		(7)
LIVER 		(2)
OTHER 		(1)
SKIN 		(1)
UTERUS

Sense strand
TGATGGGAAATTATTTTTTTGTTTTGCCTTCTAGAATTCAAATGAATGTTCATATTCCATGAAGACAATGGCTGATAGTTTTTTGTTAAAGATTTAGAACCAGTGGATTTTTATGAATGTGAACCCTTTCATGTCTTGTGGAAGATTTTCTGTTTTTTAATCTTTTTATTTATTTATTTATTTTTGCTATGTTTTCATAGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATGCTGC
....................................................................((((.(((((.........(((((((.((((.(((..((((((((((((((((((....))))))).))))).))))))..))).)))).)))))))............)))))...)))).............................................................
..................................................51........................................................................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040042(GSM532927)
G428N. (cervix)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR029127(GSM416756)
A549. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM532890(GSM532890)
G576T. (cervix)
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTCTG................................................................26214.000.0091.0080.0030.0013.00------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTCT.................................................................2521.000.0011.009.00-1.00------------------------
..................................................................................................................................................................TTTTTATTTATTTATTTATTTTTCATG.............................................................2719.000.008.005.004.001.00-1.00----------------------
...............................................................................................................................................................ATCTTTTTATTTATTTATTTATTTTTTAG..............................................................297.000.002.002.002.001.00------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTCTA................................................................265.000.003.001.001.00-------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTTTCTTG..............................................................274.000.00--3.001.00------------------------
.............................................................................................................................................................................................................AGGGAAAATGTGTAGAGGGCATGGTG...................2613.003.00----1.00-2.00---------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTCTT................................................................263.000.001.002.00--------------------------
..................................................................................................................................................................TTTTTATTTATTTATTTATTTCTTG...............................................................253.000.00--1.002.00------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTTCTTG..............................................................283.000.00-1.00-2.00------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTATTG................................................................253.000.002.00--1.00------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTCCG................................................................262.000.00--2.00-------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTTTCG...............................................................272.000.00-2.00--------------------------
..............................................................................................................................................................AATCTTTTTATTTATTTTG.........................................................................192.000.002.00---------------------------
.....................................................................................................................................................................................................................TGTGTAGAGGGCATGGTGGAGA...............2212.002.00-----------2.00----------------
.............................................................................................................................................................................................................AGGGAAAATGTGTAGAGGGCAT.......................2212.002.00--------2.00-------------------
..............................................................................................................................................................................................................GGGAAAATGTGTAGAGGGCATGGT....................2412.002.00------1.00-1.00-------------------
.................................................................................................................................................................................................................AAAATGTGTAGAGGGCATGGTG...................2212.002.00----1.00------------------1.00----
................................................................................................................................................................TCTTTTTATTTATTTATTTATTCCTG................................................................262.000.00--1.001.00------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATCTAG.................................................................242.000.00---2.00------------------------
......................................................................................................................................................................................................................GTGTAGAGGGCATGGTGGAGA...............2112.002.00------1.00--------1.00------------
..........................................................................................................................................................................TATTTATTTATTTTTGCTCTGG..........................................................221.000.00---------1.00------------------
.................................................................................................................................................................CTTTTTATTTATTTATCTTC.....................................................................201.000.00-------1.00--------------------
..........................................................................................................................................................................................................ACCAGGGAAAATGTGTAGAGGGCATG......................2611.001.00--------------1.00-------------
..........................................................................................................................................TGGAAGATTTTCTGTTGTT.............................................................................................191.000.00------------------1.00---------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTTACTT..............................................................281.000.00--1.00-------------------------
.....................................................................................................................................................................................................................TGTGTAGAGGGCATGGTGGA.................2011.001.00----1.00-----------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTCG.....................................................................211.000.00---1.00------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTCTG.................................................................251.000.00--1.00-------------------------
.................................................................................................................................................................................................................AAAATGTGTAGAGGGCATGGTGG..................2311.001.00--------------------1.00-------
..........................................................................................................................................................TTTTAATCTTTTTATTTATTTATTTATTTATTG...............................................................331.000.00-1.00--------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTATTG................................................................261.000.00-1.00--------------------------
.........................................................................................................................................................TTTTTAATCTTTTTATTTATTTATTTATTTTG.................................................................321.000.00--1.00-------------------------
...............................................................................................................................................................ATCTTTTTATTTATTTATTTCATT...................................................................241.000.00-----1.00----------------------
...............................................................................................................................................................ATCTTTTTATTTATTTATCTCA.....................................................................221.000.00-------1.00--------------------
.............TTTTTTTGTTTTGCCCTCT..........................................................................................................................................................................................................................191.000.00---------1.00------------------
...............................................................................................................................................................................................................GGAAAATGTGTAGAGGGCATGGTG...................2411.001.00----1.00-----------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTCAG.................................................................241.000.00---1.00------------------------
...............................................................................................................................................................ATCTTTTTATTTATTTATTTATTTTCTG...............................................................281.000.00---1.00------------------------
............................................................................................................................................................TTAATCTTTTTATTTATTTATTTATTTCTTG...............................................................311.000.00-1.00--------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTTTCG................................................................251.000.00--1.00-------------------------
............................................................................................................................................................TTAATCTTTTTATTTATTTATTTATTTACTG...............................................................311.000.00-1.00--------------------------
......................................................................................................................................................................................................................GTGTAGAGGGCATGGTGG..................1811.001.00----1.00-----------------------
..........................................................ATGAAGACAATGGCTGATAGAT..........................................................................................................................................................................221.000.00----1.00-----------------------
...............................................................................................................................................................ATCTTTTTATTTATTTATTTATTTTTAAG..............................................................291.000.00--1.00-------------------------
..........................................................................................................................................................................................................................AGAGGGCATGGTGGAGATC.............1911.001.00----------1.00-----------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTCG.................................................................251.000.00-1.00--------------------------
...................................................................................................................................................................................................................AATGTGTAGAGGGCATGGTG...................2011.001.00----1.00-----------------------
..................................................................................................................................................................TTTTTATTTATTTATTTATTTCTCG...............................................................251.000.00---1.00------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATCTAG.................................................................251.000.00--1.00-------------------------
........................................................................................................................................................TTTTTTAATCTTTTTATTTTTTA...........................................................................231.000.00-----1.00----------------------
................................................................................................................................................................TCTTTTTATTTATTTATTGGG.....................................................................211.000.00--1.00-------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTCG..................................................................241.000.001.00---------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTTTTCG...............................................................261.000.00--1.00-------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATCTTG.................................................................251.000.00--1.00-------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTTATC...............................................................271.000.00---------1.00------------------
..............................................................................................................................................................AATCTTTTTATTTATTTATTTATTTCG.................................................................271.000.00---1.00------------------------
.............TTTTTTTGTTTTGCCTTGCT.........................................................................................................................................................................................................................201.000.00-------1.00--------------------
.........................................................................................................................................................................................................................TAGAGGGCATGGTGGAGA...............1811.001.00---------------------1.00------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTTCGAG..............................................................281.000.00-----1.00----------------------
.....................................................................................................................................................................................................................TGTGTAGAGGGCATGGTGG..................1911.001.00--------1.00-------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTTTGTCG.............................................................291.000.00-1.00--------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTCATG................................................................251.000.00--1.00-------------------------
...............................................................................................................................................................ATCTTTTTATTTATTTATTTATTAG..................................................................251.000.001.00---------------------------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTCAG................................................................261.000.00-1.00--------------------------
....................................................................................................................................................................................................................................GTGGAGATCTTCGACATGC...1911.001.00----------------1.00-----------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTTTCTCG..............................................................281.000.00---1.00------------------------
..................................................................................................................................................................................................................................TGGTGGAGATCTTCGACA......1811.001.00-------------------------1.00--
...............................................................................................................................................................ATCTTTTTATTTATTTATTCTTT....................................................................231.000.00-----1.00----------------------
...................................................................................................................................................................................................................AATGTGTAGAGGGCAAATC....................191.000.00----1.00-----------------------
.............TTTTTTTGTTTTGCCTTGTCA........................................................................................................................................................................................................................211.000.00-------1.00--------------------
...............................................................................................................................................................ATCTTTTTATTTATTTATTTATTTCTTG...............................................................281.000.001.00---------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTGTTG....................................................................211.000.00-------------1.00--------------
......................................................................................................................................................................................................................GTGTAGAGGGCATGGTGGAG................2011.001.00----------1.00-----------------
.....................................................................................................................................................................................TTTTGCTATGTTTTCGTAA..................................................191.000.00------------1.00---------------
.....................................................................................................................................................................................TTTTGCTATGTTTTCCTA...................................................181.000.00----------------------1.00-----
..................................................................................................................................................................TTTTTATTTATTTATTTATTTTTGGTG.............................................................271.000.00-----1.00----------------------
....................................................................................................................................................................................................................ATGTGTAGAGGGCATGGTGGAGA...............2311.001.00------1.00---------------------
...............................................................................................................................................................ATCTTTTTATTTATTTATTTATAAG..................................................................251.000.00---1.00------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTTTTCAAG.............................................................281.000.00-------1.00--------------------
...................................................................................................................................................................................................................................GGTGGAGATCTTCGACATGC...2011.001.00-----------------1.00----------
................................................................................................................................................................TCTTTTTATTTATTTATTTATTAG..................................................................241.000.001.00---------------------------
..................................................................................................................................................................TTTTTATTTATTTATTTATTGGGG................................................................241.000.00-----1.00----------------------
.......................................................TCCATGAAGACAATGGCTGATAGTT..........................................................................................................................................................................2511.001.00------1.00---------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTTCAG................................................................251.000.00-1.00--------------------------
.................................................................................................................................................................CTTTTTATTTATTTATTTATTCTAG................................................................251.000.00---1.00------------------------
..................................................................................................................................................................TTTTTATTTATTTATTTATTTTTCACG.............................................................271.000.00---1.00------------------------
..........................................................................................................................................................................................................................AGAGGGCATGGTGGAGAT..............1820.500.50----------0.50-----------------
...........TATTTTTTTGTTTTGCCT.............................................................................................................................................................................................................................1830.330.33-------0.33--------------------
........................................................CCATGAAGACAATGGC..................................................................................................................................................................................1640.250.25--------------------------0.25-
..........................................................................................................................................................................................................................AGAGGGCATGGTGGAGA...............1740.250.25---------------------------0.25

Antisense strand
TGATGGGAAATTATTTTTTTGTTTTGCCTTCTAGAATTCAAATGAATGTTCATATTCCATGAAGACAATGGCTGATAGTTTTTTGTTAAAGATTTAGAACCAGTGGATTTTTATGAATGTGAACCCTTTCATGTCTTGTGGAAGATTTTCTGTTTTTTAATCTTTTTATTTATTTATTTATTTTTGCTATGTTTTCATAGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATGCTGC
....................................................................((((.(((((.........(((((((.((((.(((..((((((((((((((((((....))))))).))))).))))))..))).)))).)))))))............)))))...)))).............................................................
..................................................51........................................................................................................................................189...........................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR040042(GSM532927)
G428N. (cervix)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR189787DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040008(GSM532893)
G727N. (cervix)		SRR029127(GSM416756)
A549. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM532890(GSM532890)
G576T. (cervix)
......GAAATTATTTTTTTGATCC................................................................................................................................................................................................................................. 191.000.00------------------------1.00---
..................................ACATTCATTTGAATT......................................................................................................................................................................................................... 1501.001.00-------------------1.00--------
................................................................................................................................TTCCACAAGACATGA........................................................................................................... 1570.140.14-------0.14--------------------