ID: uc010kic.2_intron_4_0_chr6_149862568_r
GENE: (2)
chr6:149862518-149862704-


(1)
AGO2.ip 		(2)
B-CELL 		(6)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(4)
HELA 		(1)
LIVER 		(4)
OTHER 		(5)
SKIN 		(1)
UTERUS

Sense strand
AACTGTGCAAAATAAAATATTACAATTATTGCCTTATTCACAATGTACAGGTGAGTTGGTAGATATTAGTCATTTCCTTTGTTATTGGAACTATCTAACAAACTCTGTGAATTAACAAAGAATCCTACATATTACAGAGGGATTTTATCATACAAACTGGCGATCCTACAGGGACTGGCCGTGGAGG
..................................................((((....((((...((((....((((.........))))....))))....((.(((......))).))....))))...))))....................................................
..................................................51....................................................................................137................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR189784SRR189782DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR343337DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR343335SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM532887(GSM532887)
G761N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..................................................GTGAGTTGGTAGATATTAGTCATTTCCTTTGTTATTGGAACTATCTAACAAACTCTGTGAATTAACAAAGAATCCTACATATTACAG..................................................87128.0028.0010.0016.00--1.00-1.00------------------
..................................................GTGAGTTGGTAGATATTAGTCATTTCCTTTGTTATTGGAACTATCTAACAAACTCTGTGAATTAACAAAGAATCCTACATATTAC....................................................85122.0022.0022.00------------------------
...................................................TGAGTTGGTAGATATTAGTCATTTCCTTTGTTATTGGAACTATCTAACAAACTCTGTGAATTAACAAAGAATCCTACATATTAC....................................................8416.006.006.00------------------------
.....TGCAAAATAAAATATTACAATTAT..............................................................................................................................................................2412.002.00--2.00----------------------
...................................................................................................................CAAAGAATCCTACATTCG......................................................182.000.00---2.00---------------------
......................CAATTATTGCCTTATTCACAATGTACAG.........................................................................................................................................2811.001.00------------------1.00------
..........................................................................................................................................................AACTGGCGATCCTACAGGG..............1911.001.00--------------------1.00----
.........................................................................................................................................AGGGATTTTATCATACAAACTG............................2211.001.00----------1.00--------------
.......CAAAATAAAATATTACAATTATTG............................................................................................................................................................2411.001.00---1.00---------------------
.....................................................................................................................................................ATACAAACTGGCGATCCTACAGGGACT...........2711.001.00-------1.00-----------------
.....................................................................................................................................................................CTACAGGGACTGGCCGTG....1811.001.00------------1.00------------
............................................................................................................................................................CTGGCGATCCTACAGGGACTG..........2111.001.00-----------------------1.00-
.................................................................................................................AACAAAGAATCCTACATATTACAG..................................................2411.001.00---------1.00---------------
.......................................................................................................................................................................ACAGGGACTGGCCGTGGA..1811.001.00--------1.00----------------
...........................................................................................................................................................ACTGGCGATCCTACAGGGACTGGCCGTGG...2911.001.00-----------------1.00-------
...................................................TGAGTTGGTAGATATTATTT....................................................................................................................201.000.00---1.00---------------------
..................................................GTGAGTTGGTAGATATTAGTCATTT................................................................................................................2511.001.00----------------------1.00--
...............................................................................................................................................TTTATCATACAAACTACAG.........................191.000.00-----1.00-------------------
..................................................GTGAGTTGGTAGATATTAGTCATTTCCTTTGTTATTGGAACTATCTAACAAACTCTGTGAATTAACAAAGAATCCTACATATTACA...................................................8611.001.00----1.00--------------------
............................................................................................................................................................CTGGCGATCCTACAGG...............1611.001.00--------------1.00----------
..................................................................................................................................................................ATCCTACAGGGACTGGCCGCGG...221.000.00----------------1.00--------
.....................................................................................................................................................ATACAAACTGGCGATCCTACA.................2111.001.00---------------1.00---------
........................................................................................................................................................CAAACTGGCGATCCTACAGGGACT...........2411.001.00-------------1.00-----------
..................................................GTGAGTTGGTAGATATTA.......................................................................................................................1811.001.00---------------------1.00---
............................................................................................................................................GATTTTATCATACAAACTGGCGA........................2311.001.00-----------1.00-------------

Antisense strand
AACTGTGCAAAATAAAATATTACAATTATTGCCTTATTCACAATGTACAGGTGAGTTGGTAGATATTAGTCATTTCCTTTGTTATTGGAACTATCTAACAAACTCTGTGAATTAACAAAGAATCCTACATATTACAGAGGGATTTTATCATACAAACTGGCGATCCTACAGGGACTGGCCGTGGAGG
..................................................((((....((((...((((....((((.........))))....))))....((.(((......))).))....))))...))))....................................................
..................................................51....................................................................................137................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR189784SRR189782DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR343337DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR343335SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM532887(GSM532887)
G761N. (cervix)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....GTGCAAAATAAAATATTTTT................................................................................................................................................................... 204.000.00--4.00----------------------
....GTGCAAAATAAAATATTTTTG.................................................................................................................................................................. 213.000.00--3.00----------------------
...................................................................................................................................TTACAGAGGGATTTTAAAG..................................... 192.000.00-----1.00-------------1.00-----
....GTGCAAAATAAAATATTGTTG.................................................................................................................................................................. 211.000.00--1.00----------------------
...TGTGCAAAATAAAATCAAG..................................................................................................................................................................... 191.000.00--1.00----------------------
...........................................CAACTCACCTGTACA................................................................................................................................. 1550.200.20------------------------0.20