ID: uc010khj.2_intron_6_0_chr6_144219829_f.3p
GENE: (7)
chr6:144223981-144224230+


(1)
AGO2.ip
(6)
CELL-LINE
(1)
OTHER
(2)
SKIN

Sense strand
TTGAGCACCAGCTGGGAGGACAAGAACCAGGCTAACTGAAGTGCAGGGTGTGTGTCTGTCCCCTTCCCCTGGATTCAGGGAGTCCCTGCAGATGATACCATTCTGCTGCTGGTTAAGTGGGAACAGCTGTACCTCCTATGTGGCACCTGAGGTTACATACAGAAGGTGTTCTCTTTGTCTCTTTCTTTCTCTCTCTGTAGGGTAGGGCTCAGATGGGTCCAAAAAAAGAACCAACTGTTACCAGTGCTGT
.........................................................................................(((.((((((.(((((.....(((..((((....)).))..)))...((((((((.......))))))))))))))))))).)))............................................................................
.........................................................................................90............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343335SRR343334SRR189785SRR343337SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR343336SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..............................................................................................ATACCATTCTGCTGCTTTG.........................................................................................................................................1971.000.0034.0011.0011.0014.001.00-----------
..............................................................................................ATACCATTCTGCTGCTT...........................................................................................................................................1712.000.00-5.005.00-1.00---1.00-------
..............................................................................................ATACCATTCTGCTGCTTT..........................................................................................................................................186.000.002.002.002.00-------------
..............................................................................................ATACCATTCTGCTGCTTTA.........................................................................................................................................191.000.00---1.00------------
.......................................................................................................................................................................................TCTTTCTCTCTCTGT....................................................1501.001.00-------------1.00--
..............................................................................................................................................................................TTGTCTCTTTCTTTCTCTCTCG......................................................221.000.00----------1.00-----
..........GCTGGGAGGACAAGAACCCTG...........................................................................................................................................................................................................................211.000.00---------1.00------
..............................................................................................ATACCATTCTGCTGCTGTG.........................................................................................................................................191.000.00-1.00--------------

Antisense strand
TTGAGCACCAGCTGGGAGGACAAGAACCAGGCTAACTGAAGTGCAGGGTGTGTGTCTGTCCCCTTCCCCTGGATTCAGGGAGTCCCTGCAGATGATACCATTCTGCTGCTGGTTAAGTGGGAACAGCTGTACCTCCTATGTGGCACCTGAGGTTACATACAGAAGGTGTTCTCTTTGTCTCTTTCTTTCTCTCTCTGTAGGGTAGGGCTCAGATGGGTCCAAAAAAAGAACCAACTGTTACCAGTGCTGT
.........................................................................................(((.((((((.(((((.....(((..((((....)).))..)))...((((((((.......))))))))))))))))))).)))............................................................................
.........................................................................................90............................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343335SRR343334SRR189785SRR343337SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR343336SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189782SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................................................................................GTGTTCTCTTTGTCTCTTTCA................................................................ 211.000.00-----1.00----------
....................................................................................................................................................................GGTGTTCTCTTTGTCTC..................................................................... 171.000.00-------1.00--------
.............................................................................................................................................................................................................................TAACAGTTGGTTCTTTTTT.......... 1921.001.00-----------1.00----
..............................................................................................................................................................................................................................AAAAAGAACCAACTGGGGG......... 191.000.00------------1.00---
..................................................................................................................................................................................AGAGAGAGAAAGAAAGAG...................................................... 1801.001.00--------------1.00-
..........................................................................................................................AGGAGGTACAGCTGT................................................................................................................. 1580.120.12---------------0.12