ID: uc010kgb.2_intron_1_0_chr6_133071005_r.5p
GENE: (3)
chr6:133076782-133077031-


(1)
B-CELL
(5)
CELL-LINE
(1)
CERVIX
(3)
LIVER
(1)
OTHER
(4)
SKIN

Sense strand
CCAATGTGGTGTATAATACAGAAGGAAAACTCGTGGCACGTTACCATAAGGTAAGAGAGAGTGACGGACGTGTAAAATGGAGCGTGTTGTGAGTGGTCAATGCTGGGTTTAGGAGTTTGAATTTCATTCCCTATATGATACAATATTACTAGAGGGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTGAAAGTGGGCAATAAAGAAAATGACACTTTTGGCTGGGCGTGGAGGCTTATGCCTGTAAGCCC
........................................................................(((((..((((.....(((((...((((..((.......))...))))..))))).((((...(((((...)))))....)))).......))))..)))))............................................................................
........................................................................73.........................................................................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR189787SRR037937(GSM510475)
293cand2. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM532884(GSM532884)
G871T. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCTAC..........................................................................2435.000.009.0026.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCAC..........................................................................2418.000.006.0012.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCTCC.........................................................................2514.000.0011.003.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTCGGG....................................................................3010.000.005.005.00-------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGCTG......................................................................248.000.003.005.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCACT.........................................................................256.000.004.002.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCACC.........................................................................256.000.006.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTCGG.....................................................................295.000.005.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGTCG......................................................................245.000.003.002.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTTGGGC...................................................................314.000.002.002.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCTC..........................................................................244.000.002.002.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCAC...........................................................................234.000.004.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTCC.......................................................................274.000.002.002.00-------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTTCTG...............................................................304.000.001.001.002.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTCG......................................................................283.000.002.001.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTCC......................................................................283.000.00-3.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTCGGG..............................................................................203.000.003.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTAC......................................................................283.000.002.001.00-------------
...........................................................................................................................................................GTTTTTTTGTTTTGTTTTGTTGCTG......................................................................253.000.001.001.001.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTGGG......................................................................283.000.003.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTCTCC.....................................................................293.000.00-3.00-------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTCG.................................................................293.000.001.002.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCCAC..........................................................................243.000.002.001.00-------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTCCCC..........................................................................263.000.003.00--------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTTTCG...............................................................303.000.00-2.001.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGCC..........................................................................243.000.00-3.00-------------
...........................................................................................................................................................GTTTTTTTGTTTTGTTTTGTTTTCCG.....................................................................263.000.003.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTCTGG.....................................................................293.000.003.00--------------
....................................................................................................................................................................TTTTGTTTTGTTTTTTGTTTCTAG..............................................................242.000.00-2.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTAC...........................................................................232.000.002.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCAT..........................................................................242.000.00-2.00-------------
...............................................................................................................................................................TTTTGTTTTGTTTTGTTTTTTGTTCAAG...............................................................282.000.00--2.00------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCTTC......................................................................242.000.00-2.00-------------
....................................................................................................................................................................TTTTGTTTTGTTTTTTGTTTCGAG..............................................................242.000.00-2.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTC.......................................................................272.000.00-2.00-------------
..............................................................................................................................................................TTTTTGTTTTGTTTTGTTTTTTGTTTCTCA..............................................................302.000.002.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCGTT..........................................................................242.000.00-2.00-------------
....................................................................................................................................................................TTTTGTTTTGTTTTTTGTTTTTCGAG............................................................262.000.002.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTTGTC...............................................................312.000.00-2.00-------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTCGAG..............................................................262.000.002.00--------------
.............................................................................TGGAGCGTGTTGTGAGTGG..........................................................................................................................................................1912.002.00------2.00--------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTAAC..........................................................................242.000.00-2.00-------------
...............................................................................................................................................................TTTTGTTTTGTTTTGTTTTTTGTTTTTCAG.............................................................302.000.001.00-1.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTCTC.......................................................................272.000.002.00--------------
...........................................................................................................................................................GTTTTTTTGTTTTGTTTTGTTCTTC......................................................................252.000.001.00-1.00------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTTCTTC..............................................................322.000.002.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTCTGC......................................................................282.000.002.00--------------
................................................................................................................................................................TTTGTTTTGTTTTGTTTTTTGTTTCTCT..............................................................282.000.002.00--------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTCTGG......................................................................262.000.002.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTTCC................................................................302.000.00-2.00-------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTTCCTC..............................................................312.000.002.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTCTAC...........................................................................232.000.002.00--------------
..............................................................................................................................................................TTTTTGTTTTGTTTTGTTTTTTGTTTGCTT..............................................................302.000.00-2.00-------------
........................................................................................................................................................................................................................TTGGCTGGGCGTGGAGGCG...............192.000.00---2.00-----------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTTCGC....................................................................302.000.001.001.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTGCT...........................................................................232.000.002.00--------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTCTTC...............................................................262.000.002.00--------------
.....................................................................................................................................................................TTTGTTTTGTTTTTTGTTTTTCGAG............................................................252.000.00-2.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTCC........................................................................262.000.001.001.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTCTTG...........................................................................232.000.00-2.00-------------
......................AGGAAAACTCGTGGCACGTTAC..............................................................................................................................................................................................................2212.002.00----2.00----------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTGTTA......................................................................281.000.00-1.00-------------
...............ATACAGAAGGAAAACTCG.........................................................................................................................................................................................................................1811.001.00----------1.00----
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTGC.........................................................................251.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTCTTC......................................................................281.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCGT...........................................................................231.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTCTG.......................................................................271.000.001.00--------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTTTTCCCA............................................................291.000.00-1.00-------------
...............................................................................................................................................................TTTTGTTTTGTTTTGTTTTTTGTTTTCGG..............................................................291.000.00-1.00-------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTTTCGTA.............................................................281.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTCTG.....................................................................291.000.001.00--------------
...........................................................................................................................................................GTTTTTTTGTTTTGTTTTGTTCTGC......................................................................251.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTGCC.....................................................................291.000.001.00--------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTCTCC......................................................................261.000.001.00--------------
......................................................................................................................................................................TTGTTTTGTTTTTTGTTTTTCGAG............................................................241.000.001.00--------------
...............................................................................................................................................................TTTTGTTTTGTTTTGTTTTTTGTTTCTCG..............................................................291.000.00-1.00-------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTCCCC.........................................................................271.000.001.00--------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTGCTG......................................................................231.000.00-1.00-------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGGTG......................................................................241.000.001.00--------------
..............................................................................................................................................................TTTTTGTTTTGTTTTGTTTTTTGTTCTTG...............................................................291.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCTGT..........................................................................241.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTC.............................................................................231.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTCTT............................................................................221.000.001.00--------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTTGTC..............................................................261.000.00-1.00-------------
..............................................................................................................................................................TTTTTGTTTTGTTTTGTTTTTTGTTCGTC...............................................................291.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTCTAC..............................................................................201.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTCTCT.....................................................................291.000.001.00--------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTTCCT...............................................................261.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTGTCT.......................................................................271.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCTT...........................................................................231.000.00-1.00-------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTTTCGGC.............................................................281.000.00-1.00-------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTCAG.......................................................................251.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTGTC.......................................................................271.000.001.00--------------
...................................................................................................................................................................GTTTTGTTTTGTTTTTTGTTCAAG...............................................................241.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCA...........................................................................231.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTCTGT...........................................................................231.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTCA........................................................................261.000.00-1.00-------------
..................CAGAAGGAAAACTCGTGGCACG..................................................................................................................................................................................................................2211.001.00------------1.00--
.........................................................................................................................................................GGGTTTTTTTGTTTTGTTTTGTTTTCATT....................................................................291.000.00-1.00-------------
.........................................................................................................................................................GGGTTTTTTTGTTTTGTTTTGTTTTCCTG....................................................................291.000.00-1.00-------------
.......................................................................................................................................................GAGGGTTTTTTTGTTTTGTTTTTACC.........................................................................261.000.001.00--------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTGGTG...............................................................251.000.001.00--------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTTCTC...............................................................301.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTGTCG.........................................................................271.000.001.00--------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTTTTCTCT............................................................331.000.00-1.00-------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTTCTCC.............................................................271.000.00-1.00-------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCGGG......................................................................241.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTCGT...........................................................................251.000.00-1.00-------------
.......................................................................................................................................................GAGGGTTTTTTTGTTTTGTTTTGTTGTC.......................................................................281.000.00-1.00-------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTCGTC..............................................................................221.000.001.00--------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTTTGTC..............................................................271.000.00-1.00-------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTTTTAACG...................................................................291.000.00--1.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTCTGC............................................................................221.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTGTTG......................................................................281.000.00-1.00-------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTACG......................................................................241.000.00--1.00------------
...................................................................................................................................................................GTTTTGTTTTGTTTTTTGTTTTTTGTTA...........................................................281.000.001.00--------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTTCGAG..............................................................311.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTCTCG...........................................................................251.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTGCTG......................................................................281.000.001.00--------------
...........................................................................................................................................................GTTTTTTTGTTTTGTTTTGTTTTCGC.....................................................................261.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTCTG............................................................................241.000.001.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTGTC.......................................................................231.000.00-1.00-------------
....................................................................................................................................................................TTTTGTTTTGTTTTTTGTTTTCTCA.............................................................251.000.001.00--------------
.........................................................................................................................................................GGGTTTTTTTGTTTTGTTTTGTTTCG.......................................................................261.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCGT..........................................................................241.000.00-1.00-------------
....................................................................................................................................................................TTTTGTTTTGTTTTTTGTTTTTCACA............................................................261.000.001.00--------------
..................................................................................................................................................................................................................ACACTTTTGGCTGGGAAAT.....................191.000.00-----1.00---------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCTA...........................................................................231.000.00-1.00-------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTTCTTC.............................................................271.000.001.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTCCG................................................................301.000.00--1.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTAGT..........................................................................241.000.00-1.00-------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTATTG...............................................................261.000.00--1.00------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTCGTT..........................................................................261.000.00-1.00-------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTTCTTC..............................................................271.000.001.00--------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGCTC.........................................................................231.000.001.00--------------
..............................................................................................................................................................TTTTTGTTTTGTTTTGTTTTTTGTTTTGCC..............................................................301.000.00-1.00-------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTCGT.......................................................................251.000.001.00--------------
..............................................................................................................................................................TTTTTGTTTTGTTTTGTTTTTTGTTTGTTC..............................................................301.000.001.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTCTT................................................................301.000.00--1.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTCTAG.....................................................................291.000.00-1.00-------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTTCTGT.............................................................271.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCGCC.........................................................................251.000.001.00--------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGGGC..................................................................271.000.001.00--------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTTTCGGG....................................................................281.000.001.00--------------
.........................................TACCATAAGGTAAGAGCGCG.............................................................................................................................................................................................201.000.00-----------1.00---
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTTCCC......................................................................261.000.001.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTTCG................................................................301.000.00-1.00-------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTCTGT..........................................................................261.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTTCAG.....................................................................291.000.00-1.00-------------
................TACAGAAGGAAAACTCGTGGCACGTTACCA............................................................................................................................................................................................................3011.001.00-----1.00---------
...............................................................................................................................................................TTTTGTTTTGTTTTGTTTTTTGTTTCTC...............................................................281.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTCTG......................................................................281.000.001.00--------------
.......................................................................................................................................................GAGGGTTTTTTTGTTTTGTTTTGTTGCT.......................................................................281.000.001.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTTGC................................................................301.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTCTC......................................................................281.000.00-1.00-------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTGTC..........................................................................261.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTCTAG...........................................................................231.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTTTGGT......................................................................281.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGGCGT.............................................................................211.000.001.00--------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTCCTT...............................................................261.000.001.00--------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTTCGAG..............................................................321.000.00-1.00-------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTCGAG......................................................................241.000.00-1.00-------------
...........................................................................................................................................................GTTTTTTTGTTTTGTTTTGTCGTT.......................................................................241.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTCCC..........................................................................261.000.001.00--------------
.....................................................................................................................................................TAGAGGGTTTTTTTGTTTTGTTTCTG...........................................................................261.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTCGG...........................................................................251.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCGAA..........................................................................241.000.00-1.00-------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTCTGT...........................................................................251.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCC............................................................................221.000.001.00--------------
...............................................................................................................................................................TTTTGTTTTGTTTTGTTTTTTGTTTTTCAC.............................................................301.000.00-1.00-------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTGTC................................................................291.000.00-1.00-------------
....................................................................................................................................................................TTTTGTTTTGTTTTTTGTTTTTCGGA............................................................261.000.001.00--------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTCTC...............................................................251.000.00-1.00-------------
............................................................................................................................................................TTTTTTTGTTTTGTTTTGTTTTTTGTTCTTG...............................................................311.000.001.00--------------
...........................................................................................................................................................GTTTTTTTGTTTTGTTTTGTTTTCATG....................................................................271.000.001.00--------------
................................................................................................................................................................TTTGTTTTGTTTTGTTTTTTGTTTTCCAG.............................................................291.000.00--1.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTCGTT.........................................................................251.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGTCTCC.......................................................................271.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTCGC..........................................................................261.000.001.00--------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTTTTGTTC...........................................................291.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTACT............................................................................221.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTCGT.................................................................................191.000.00-1.00-------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTTCCCC.....................................................................271.000.001.00--------------
..............................................................................................................................................................TTTTTGTTTTGTTTTGTTTTTTGTTTTCAG..............................................................301.000.00--1.00------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTGTC...........................................................................231.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTGCTG.........................................................................251.000.00-1.00-------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTGTCG...............................................................301.000.001.00--------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTAAAG...............................................................261.000.001.00--------------
.........................................................................................................................................................GGGTTTTTTTGTTTTGTTTTCGTT.........................................................................241.000.00-1.00-------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTTCGG..............................................................261.000.00-1.00-------------
.................................................................................................................................................................TTGTTTTGTTTTGTTTTTTGTTCAAG...............................................................261.000.001.00--------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTTCATG.....................................................................271.000.001.00--------------
.......................................................................................................................................................................TGTTTTGTTTTTTGTTTTTCTGG............................................................231.000.00-1.00-------------
......................................................................................................................................................................TTGTTTTGTTTTTTGTTTTTTGTTTA..........................................................261.000.001.00--------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTTTCGTA............................................................281.000.00-1.00-------------
...............................................................................................................................................................................................................ATGACACTTTTGGCTTTTG........................191.000.00--------1.00------
...........................................................................................................................................................GTTTTTTTGTTTTGTTTTGTTCCT.......................................................................241.000.001.00--------------
..................................................................................................................................................................TGTTTTGTTTTGTTTTTTGTTTCGG...............................................................251.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTCTTC..........................................................................241.000.001.00--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTGATG.........................................................................271.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTCCGC...........................................................................231.000.00-1.00-------------
...............................................................................................................................................................TTTTGTTTTGTTTTGTTTTTTGTTTTACG..............................................................291.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTTTTACTT.........................................................................251.000.00-1.00-------------
..........................................................................................................................................................GGTTTTTTTGTTTTGTTTTGTTTTTTCGAG..................................................................301.000.00--1.00------------
.............................................................................................................................................................TTTTTTGTTTTGTTTTGTTTTTTGTTCGTC...............................................................301.000.00-1.00-------------
........................................................................................................................................................AGGGTTTTTTTGTTTCTTC...............................................................................191.000.001.00--------------
........................................................................................................................................................AGGGTTTTTTTGTTTTGTCCAC............................................................................221.000.001.00--------------
..........GTATAATACAGAAGGAA...............................................................................................................................................................................................................................1730.330.33--------------0.33
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTGTTGCTG......................................................................3090.220.110.22--------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTGTTGCT.......................................................................2990.220.110.110.11-------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTGTTGC........................................................................2890.110.11-0.11-------------
......................................................................................................................................................AGAGGGTTTTTTTGTTTTGTTTTGTT..........................................................................2690.110.11-0.11-------------

Antisense strand
CCAATGTGGTGTATAATACAGAAGGAAAACTCGTGGCACGTTACCATAAGGTAAGAGAGAGTGACGGACGTGTAAAATGGAGCGTGTTGTGAGTGGTCAATGCTGGGTTTAGGAGTTTGAATTTCATTCCCTATATGATACAATATTACTAGAGGGTTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTGAAAGTGGGCAATAAAGAAAATGACACTTTTGGCTGGGCGTGGAGGCTTATGCCTGTAAGCCC
........................................................................(((((..((((.....(((((...((((..((.......))...))))..))))).((((...(((((...)))))....)))).......))))..)))))............................................................................
........................................................................73.........................................................................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR189787SRR037937(GSM510475)
293cand2. (cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
GSM532884(GSM532884)
G871T. (cervix)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................CCATTTTACACGTCCGTCACTCTCTCTTACC.......................................................................................................................................................................... 3111.001.00-------------1.00-
..........................................................................................................................................................................................................AGAAAATGACACTTTGCT.............................. 181.000.00---------1.00-----
.......................................................AGAGAGTGACGGACGTCT................................................................................................................................................................................. 181.000.00--1.00------------
..............................................................................................................................................................................................................................GGGCGTGGAGGCTTATCATA........ 201.000.00-------1.00-------