ID: uc010kaz.2_intron_1_0_chr6_74407296_f.5p
GENE: (2)
chr6:74407246-74407495+


(1)
BREAST
(2)
CELL-LINE
(1)
HELA
(1)
KIDNEY
(1)
LIVER
(1)
OTHER
(6)
SKIN
(1)
UTERUS

Sense strand
ATCAAACCTCACTGTCTCTGTCCTGGAAGCAGAAGGAGTCTTTGAAAAAGGTAAGATAAACAGCATAAAGTCTTACCCTTCTGCAGTAATAACTGGAATATGTTAATAAGGTCATGTGTTAGGTAGTATAGCAGAGAAACCCCAAATTTGCAGTATCTTACCTAATATACTTTTAATTCTCACTCATGTAAAGTCCTAGATGGTGTTCCTGGATGCTCTTCCAAGTGCAGATTCAGAGACCCAGTTTCCT
.........................................................................................((((........))))..(((((...((((((((((((((.(((((...........))))).))))..))))))))))))))).............................................................................
......................................................................................87.......................................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343335SRR189785SRR343334SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR343336SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................................................ACTTTTAATTCTCACTTTTG..............................................................2099.000.0067.0013.0010.008.00-----1.00---------
.................CTGTCCTGGAAGCAGAAGGAGTCTTT...............................................................................................................................................................................................................2611.001.00------------1.00------
............TGTCTCTGTCCTGGAAGC............................................................................................................................................................................................................................1821.001.00-----------------0.500.50
........................................................................................................................................................................ACTTTTAATTCTCACTTCTG..............................................................201.000.001.00------------------
...............CTCTGTCCTGGAAGCAGA.........................................................................................................................................................................................................................1811.001.00-------------1.00-----
.........CACTGTCTCTGTCCTGGAAGCAGAAGGGT....................................................................................................................................................................................................................291.000.00-------1.00-----------
..........ACTGTCTCTGTCCTGGAAGCA...........................................................................................................................................................................................................................2111.001.00-----1.00-------------
........................................................................................................................................................................................................TGGTGTTCCTGGATGCTCTTCCAAGTG.......................2711.001.00----------1.00--------
...........................................................................................ACTGGAATATGTTAATTT.............................................................................................................................................181.000.00----------------1.00--
........................................................................................................................................................................ACTTTTAATTCTCACTCTTG..............................................................201.000.001.00------------------
........................................................................................................................................................................ACTTTTAATTCTCACTGTTG..............................................................201.000.001.00------------------
...........CTGTCTCTGTCCTGGAAGCAG..........................................................................................................................................................................................................................2111.001.00------1.00------------
.....................................................................................................................................................................TATACTTTTAATTCTCACT..................................................................1911.001.00----1.00--------------
........TCACTGTCTCTGTCCTGGAAG.............................................................................................................................................................................................................................2111.001.00--------1.00----------
............................................AAAAAGGTAAGATAAATGA...........................................................................................................................................................................................191.000.00---------------1.00---
........................................................................................................................................................................ACTTTTAATTCTCACTTTGG..............................................................201.000.001.00------------------
....................................................................................................................................................................ATATACTTTTAATTCTTAG...................................................................191.000.00----1.00--------------
...........................................................................................................................................................................TTTAATTCTCACTCACTT.............................................................181.000.00----1.00--------------
........................................................................................................................................................................ACTTTTAATTCTCACTTTTA..............................................................201.000.001.00------------------
..............TCTCTGTCCTGGAAGCAGAAG.......................................................................................................................................................................................................................2111.001.00-----1.00-------------
.TCAAACCTCACTGTCTCTGTCCTGGAAG.............................................................................................................................................................................................................................2811.001.00--------------1.00----
.......................TGGAAGCAGAAGGAGTCTT................................................................................................................................................................................................................1911.001.00-----------1.00-------
........................................................................................................................................................................ACTTTTAATTCTCACTTGTG..............................................................201.000.001.00------------------

Antisense strand
ATCAAACCTCACTGTCTCTGTCCTGGAAGCAGAAGGAGTCTTTGAAAAAGGTAAGATAAACAGCATAAAGTCTTACCCTTCTGCAGTAATAACTGGAATATGTTAATAAGGTCATGTGTTAGGTAGTATAGCAGAGAAACCCCAAATTTGCAGTATCTTACCTAATATACTTTTAATTCTCACTCATGTAAAGTCCTAGATGGTGTTCCTGGATGCTCTTCCAAGTGCAGATTCAGAGACCCAGTTTCCT
.........................................................................................((((........))))..(((((...((((((((((((((.(((((...........))))).))))..))))))))))))))).............................................................................
......................................................................................87.......................................................................................................192........................................................
SizePerfect hitTotal NormPerfect NormSRR189784SRR343335SRR189785SRR343334SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR343336SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)