ID: uc010juh.2_intron_8_0_chr6_32946166_f.5p
GENE: (9)
chr6:32946116-32946365+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(5)
BRAIN 		(2)
BREAST 		(28)
CELL-LINE 		(1)
CERVIX 		(1)
HEART 		(8)
HELA 		(9)
LIVER 		(2)
OTHER 		(13)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GCTGCTTTAGGCCCTTCTGGCTTTGGACCTTCTGGAGGAAGTGGCACCAAGTGAGTTAGAGTAGGAAGCAGAGACTAGTTTGGCTATTTCTGTCTCTCTGGGGGATGCCATCTCTCTTTGCAAAGATAATTCTAAATGGCCAGTTAACAGATACAATAGGCTTTGAGCAGTGGTCCCCAACCTTTTTGGCACCAGGGACCAGTTTCGTGGAAGACAGATTTTACCACAGACAGGGTTTGAGGGGATGGTT
........................................................(((((.((...(((((((.(((.....))))))))))))))))).((....)).............................................................................................................................................
..................................................51..........................................................111.........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM956925PAZD5SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		TAX577738(Rovira)
total RNA. (breast)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
.....................................GAAGTGGCACCAAGTGAGTTAGAGTAGGAAGCAGAGACTAGTTTGGCTATTTCTGTCTCTCTGGGGGATGCCA............................................................................................................................................7318.008.00----8.00-----------------------------------------------------------------------
.....................TTTGGACCTTCTGGAGGAAGTGG..............................................................................................................................................................................................................2317.007.00-2.001.00-------------------1.00-----2.00---------------------------1.00-------------------
................................TGGAGGAAGTGGCACCAA........................................................................................................................................................................................................1816.006.00------------1.00--------------2.00------------------1.00---1.00----------------------1.00--
.....................TTTGGACCTTCTGGAGGAAGTGGC.............................................................................................................................................................................................................2414.004.00-1.00--------------1.00---------------1.00--------------1.00----------------------------
.......................TGGACCTTCTGGAGGAAGTGG..............................................................................................................................................................................................................2114.004.00---------3.00---------------------------------------------1.00--------------------
..................................................GTGAGTTAGAGTAGGAAGCAGAGAC...............................................................................................................................................................................2513.003.00------1.00------1.00----------------------------------------------------1.00---------
................CTGGCTTTGGACCTTCTGGAGGAAGT................................................................................................................................................................................................................2613.003.00-----2.00----------------------------------------------------------------1.00-----
.......................TGGACCTTCTGGAGGAAGTGGCAT...........................................................................................................................................................................................................243.000.00-------3.00--------------------------------------------------------------------
..................................................GTGAGTTAGAGTAGGAAGC.....................................................................................................................................................................................1913.003.00------2.00------------------1.00--------------------------------------------------
.....................TTTGGACCTTCTGGAGGAAGTG...............................................................................................................................................................................................................2213.003.00--------------------2.00----------------------------1.00--------------------------
..................................................GTGAGTTAGAGTAGGAAGCAGA..................................................................................................................................................................................2213.003.00-------------------2.00----------1.00---------------------------------------------
.....................................................................................ATTTCTGTCTCTCTGGGGGATG...............................................................................................................................................2213.003.00---------------3.00------------------------------------------------------------
.............................................................................................................................ATAATTCTAAATGGCCAGTTA........................................................................................................2112.002.00------------------2.00---------------------------------------------------------
.....................TTTGGACCTTCTGGAGGAAGTGGCACCA.........................................................................................................................................................................................................2812.002.00------2.00---------------------------------------------------------------------
...................GCTTTGGACCTTCTGGAGGAAGTGGCACC..........................................................................................................................................................................................................2912.002.00-1.00---1.00----------------------------------------------------------------------
......................TTGGACCTTCTGGAGGAAGTGGC.............................................................................................................................................................................................................2312.002.00-1.00----------------------------------------1.00---------------------------------
...................................................................................................................................................................................................................................AGACAGGGTTTGAGGGGATGGTTTGGG272.000.00---2.00------------------------------------------------------------------------
.......................................................................................................................................................................................TTTTGGCACCAGGGACCAGTTGTGG..........................................252.000.00---2.00------------------------------------------------------------------------
..................................................GTGAGTTAGAGTAGGA........................................................................................................................................................................................1612.002.00----------------1.00---------------------------------------------1.00-------------
........................................................................GACTAGTTTGGCTATTTC................................................................................................................................................................1812.002.00--2.00-------------------------------------------------------------------------
..............................TCTGGAGGAAGTGGCACCAAG.......................................................................................................................................................................................................2112.002.00-----------2.00----------------------------------------------------------------
...............................CTGGAGGAAGTGGCACCAA........................................................................................................................................................................................................1912.002.00-----------1.00--1.00-------------------------------------------------------------
.......................TGGACCTTCTGGAGGAAGT................................................................................................................................................................................................................1912.002.00--------2.00-------------------------------------------------------------------
......................TTGGACCTTCTGGAGGAAG.................................................................................................................................................................................................................1912.002.00-----------------------1.00----------1.00-----------------------------------------
.....................TTTGGACCTTCTGGAGGA...................................................................................................................................................................................................................1812.002.00----------2.00-----------------------------------------------------------------
..................................................GTGAGTTAGAGTAGGAAGCAGAGACTAGTTTGGCTATTTCTGTCTCTCTGGGGGATGCCATCT.........................................................................................................................................6312.002.00-------------------------------2.00--------------------------------------------
.............................TTCTGGAGGAAGTGGCAC...........................................................................................................................................................................................................1821.501.50--0.50-----------------------------------1.00-------------------------------------
.........................................................................................................................................................................................TTGGCACCAGGGACCAGTTTCGTGGAACACA..................................311.000.00-1.00--------------------------------------------------------------------------
.....................TTTGGACCTTCTGGAGGAAG.................................................................................................................................................................................................................2011.001.00-1.00--------------------------------------------------------------------------
.......................TGGACCTTCTGGAGGAAGTGGC.............................................................................................................................................................................................................2211.001.00-1.00--------------------------------------------------------------------------
.................TGGCTTTGGACCTTCTGGAGG....................................................................................................................................................................................................................2111.001.00-----------------------------1.00----------------------------------------------
......................................................GTTAGAGTAGGAAGCAGA..................................................................................................................................................................................1811.001.00----------------------------------------1.00-----------------------------------
...............................CTGGAGGAAGTGGCACCAAGCTCT...................................................................................................................................................................................................2411.001.00-------1.00--------------------------------------------------------------------
..............................TCTGGAGGAAGTGGCACCAA........................................................................................................................................................................................................2011.001.00-----------------------------1.00----------------------------------------------
...........CCCTTCTGGCTTTGGACCTTCTGGAGG....................................................................................................................................................................................................................2711.001.00------------------------1.00---------------------------------------------------
.............................................................................................................................................AGTTAACAGATACAATAGGCTTTGAGCAGTGGT............................................................................3311.001.00-------------------------1.00--------------------------------------------------
.............................TTCTGGAGGAAGTGGCACCAAGCT.....................................................................................................................................................................................................241.000.00-----1.00----------------------------------------------------------------------
...............................CTGGAGGAAGTGGCACCAAG.......................................................................................................................................................................................................2011.001.00---------------------------------------------------1.00------------------------
..............................................................................................................................................GTTAACAGATACAATAGGCTTTGAGCAG................................................................................2811.001.00--------------------------1.00-------------------------------------------------
.................TGGCTTTGGACCTTCTGGAGGAAGTGGCACC..........................................................................................................................................................................................................3111.001.001.00---------------------------------------------------------------------------
...................................................TGAGTTAGAGTAGGAAGCAGAGACCAG............................................................................................................................................................................271.000.00---1.00------------------------------------------------------------------------
................................TGGAGGAAGTGGCACCAAGCT.....................................................................................................................................................................................................2111.001.00----------------------------------------------------------1.00-----------------
..................................................GTGAGTTAGAGTAGGAAGCAA...................................................................................................................................................................................2111.001.00------------------------------1.00---------------------------------------------
.............CTTCTGGCTTTGGACCTTCTGGAGGAA..................................................................................................................................................................................................................2711.001.00-----1.00----------------------------------------------------------------------
........................................................................................................................................................................................TTTGGCACCAGGGACCAGTTGTGG..........................................241.000.001.00---------------------------------------------------------------------------
.......................................................TTAGAGTAGGAAGCAGAGACTAGTTC.........................................................................................................................................................................261.000.00------------------------------------------------------------------------1.00---
.................................................................................................................................................................................................................................ACAGACAGGGTTTGAGGGGACGG..231.000.001.00---------------------------------------------------------------------------
.........................................................AGAGTAGGAAGCAGAGACTAG............................................................................................................................................................................2111.001.00------------1.00---------------------------------------------------------------
..............................TCTGGAGGAAGTGGCACCAAGCT.....................................................................................................................................................................................................2311.002.00-----------------------------------------------------------------1.00----------
.........................................TGGCACCAAGTGAGTTAGAGTAGGAAG......................................................................................................................................................................................2711.001.001.00---------------------------------------------------------------------------
......................TTGGACCTTCTGGAGGAAGTGGCACCAAGC......................................................................................................................................................................................................301.000.001.00---------------------------------------------------------------------------
....................CTTTGGACCTTCTGGAGGAAGTGGC.............................................................................................................................................................................................................2511.001.00--1.00-------------------------------------------------------------------------
...................................................................................................................................................................................................................................AGACAGGGTTTGAGGGGATGGCTCT251.000.001.00---------------------------------------------------------------------------
.......................................................TTAGAGTAGGAAGCAGAGACTAGC...........................................................................................................................................................................241.000.001.00---------------------------------------------------------------------------
.........................................................AGAGTAGGAAGCAGAGACCAG............................................................................................................................................................................211.000.001.00---------------------------------------------------------------------------
..................GGCTTTGGACCTTCTGGAGGAAGTG...............................................................................................................................................................................................................2511.001.00-----1.00----------------------------------------------------------------------
..................................................GTGAGTTAGAGTAGGAAAA.....................................................................................................................................................................................191.000.00-------1.00--------------------------------------------------------------------
.................TGGCTTTGGACCTTCTGGAGGAAGTG...............................................................................................................................................................................................................2611.001.00--1.00-------------------------------------------------------------------------
.........................................................................................................................................................................................TTGGCACCAGGGACCAGTTTCGCAGA.......................................261.000.001.00---------------------------------------------------------------------------
..................................................GTGAGTTAGAGTAGGAAGCAGAG.................................................................................................................................................................................2311.001.00--------------------------------------------1.00-------------------------------
..............TTCTGGCTTTGGACCTTCTGGAGGA...................................................................................................................................................................................................................2511.001.00--1.00-------------------------------------------------------------------------
...............................................................................................................................................TTAACAGATACAATAGGCTTTGAGCAG................................................................................2711.001.00-------------1.00--------------------------------------------------------------
..................................................GTGAGTTAGAGTAGGAAGCAGAGACTAGTTTGG.......................................................................................................................................................................3311.001.00--------------1.00-------------------------------------------------------------
.................................................................................................................................................AACAGATACAATAGGCTTTGAGC..................................................................................2311.001.00---------------------------------------------1.00------------------------------
.................TGGCTTTGGACCTTCTGGAGGAAGTGGCA............................................................................................................................................................................................................2911.001.00--------1.00-------------------------------------------------------------------
.................TGGCTTTGGACCTTCTGGAGGA...................................................................................................................................................................................................................2211.001.00------------------------------------------------1.00---------------------------
................CTGGCTTTGGACCTTCTGGAGGAAGTGGCAC...........................................................................................................................................................................................................3111.001.00----------------------------------------------------------------1.00-----------
...........................................................................................................................................................ATAGGCTTTGAGCAGTGGTCCCCAA......................................................................2511.001.00--1.00-------------------------------------------------------------------------
......................TTGGACCTTCTGGAGGAAGTGGCAAC..........................................................................................................................................................................................................2611.001.00--1.00-------------------------------------------------------------------------
....................................................................................................................................................AGATACAATAGGCTTTGAGCAGTGGTCCCCAAC.....................................................................3311.001.00-1.00--------------------------------------------------------------------------
...........................................................AGTAGGAAGCAGAGACTAGTTTGGCC.....................................................................................................................................................................261.000.001.00---------------------------------------------------------------------------
...........................................................AGTAGGAAGCAGAGACTAGTTTGGCTAC...................................................................................................................................................................281.000.001.00---------------------------------------------------------------------------
......................................................................................................................................AATGGCCAGTTAACAGATACAATAG...........................................................................................2511.001.00---1.00------------------------------------------------------------------------
......................TTGGACCTTCTGGAGGAAGTGGCACC..........................................................................................................................................................................................................2611.001.00-1.00--------------------------------------------------------------------------
.....................................................AGTTAGAGTAGGAAGCAGAGAC...............................................................................................................................................................................2211.001.00-------------1.00--------------------------------------------------------------
..........................................................................................................................................................AATAGGCTTTGAGCAGTGGTCCCCAAC.....................................................................2711.001.00--1.00-------------------------------------------------------------------------
................................TGGAGGAAGTGGCACCAAGCGAG...................................................................................................................................................................................................2311.001.001.00---------------------------------------------------------------------------
..............TTCTGGCTTTGGACCTTCTGGAGGGAG.................................................................................................................................................................................................................271.000.00----------1.00-----------------------------------------------------------------
.......TAGGCCCTTCTGGCTTTGGACCTTCCGG.......................................................................................................................................................................................................................281.000.001.00---------------------------------------------------------------------------
.....................TTTGGACCTTCTGGAGGAAGTGGCA............................................................................................................................................................................................................2511.001.00---------------------------------------------------------------------1.00------
.....................TTTGGACCTTCTGGAGGAAGT................................................................................................................................................................................................................2111.001.00----------------------1.00-----------------------------------------------------
....................CTTTGGACCTTCTGGAGGAAGTGG..............................................................................................................................................................................................................2411.001.00---------------------------------1.00------------------------------------------
.....................................................................................................................................................GATACAATAGGCTTTGAGCAGTGGTCCCC........................................................................2911.001.00--------------------------1.00-------------------------------------------------
............................CTTCTGGAGGAAGTGGCACC..........................................................................................................................................................................................................2011.001.00-----------------------------------------------------1.00----------------------
...................................AGGAAGTGGCACCAAGCT.....................................................................................................................................................................................................181.000.00---------------------------------------------------------------1.00------------
.............................TTCTGGAGGAAGTGGCACCA.........................................................................................................................................................................................................2011.001.00-----------------------------------------------------------1.00----------------
.........................................................................................................................................................................................TTGGCACCAGGGACCAGTTGTGG..........................................231.000.001.00---------------------------------------------------------------------------
....................CTTTGGACCTTCTGGAGGAAG.................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------1.00-------
.........................................TGGCACCAAGTGAGTTAGAGTAGGAAGCAGAGA................................................................................................................................................................................3311.001.00-1.00--------------------------------------------------------------------------
.....................TTTGGACCTTCTGGAGGAAGTGGCACC..........................................................................................................................................................................................................2711.001.00-1.00--------------------------------------------------------------------------
......................................................................................................................................................ATACAATAGGCTTTGAGCAGTGGTCCCCAAC.....................................................................3111.001.00-------------------------------------1.00--------------------------------------
...................................................................................................................................................................................................................AGACAGATTTTACCACAGACAGGGTTTGAGGG.......3211.001.00-----------------1.00----------------------------------------------------------
......................TTGGACCTTCTGGAGGAAGTGGCA............................................................................................................................................................................................................2411.001.00-1.00--------------------------------------------------------------------------
................................TGGAGGAAGTGGCACCAAG.......................................................................................................................................................................................................1911.001.00------------1.00---------------------------------------------------------------
..............................................CCAAGTGAGTTAGAGTAGGAAGCA....................................................................................................................................................................................2411.001.00------------------------------------------------------------1.00---------------
...............TCTGGCTTTGGACCTTCTGGAGGAAGTGGCACC..........................................................................................................................................................................................................3311.001.00-----------------1.00----------------------------------------------------------
..................................................GTGAGTTAGAGTAGGAAGCAGAGACTAGTTTGGA......................................................................................................................................................................3411.001.00-----------------------------------1.00----------------------------------------
........AGGCCCTTCTGGCTTTGGACCTTCCGG.......................................................................................................................................................................................................................271.000.001.00---------------------------------------------------------------------------
.............................TTCTGGAGGAAGTGGCACCAA........................................................................................................................................................................................................2111.001.00------------------------1.00---------------------------------------------------
..............................................................................................................................................GTTAACAGATACAATAGGCTTTGAGCAGTGG.............................................................................3111.001.00------------------------------------------------------1.00---------------------
.................................................................................................................................................................................................................................ACAGACAGGGTTTGAGGGGATGGCC251.000.00---1.00------------------------------------------------------------------------
..................................................................................GCTATTTCTGTCTCTCTGGGGGATGC..............................................................................................................................................2611.001.00----------------------------------------------------1.00-----------------------
...............TCTGGCTTTGGACCTTCTGGAGGA...................................................................................................................................................................................................................2411.001.00-----------------------------------------1.00----------------------------------
...........................................................................................................................................................ATAGGCTTTGAGCAGTGGTC...........................................................................2011.001.00-----------------------1.00----------------------------------------------------
......................TTGGACCTTCTGGAGGAAGTGG..............................................................................................................................................................................................................2211.001.00---------------------1.00------------------------------------------------------
...............................CTGGAGGAAGTGGCACCA.........................................................................................................................................................................................................1811.001.00------------------------------------1.00---------------------------------------
.....................................................................................................................................................................................................................................ACAGGGTTTGAGGGGATGGTTTTCG251.000.001.00---------------------------------------------------------------------------
..............................................................................................................................................................................................ACCAGGGACCAGTTTCGTGGAAGACAGTCT..............................301.000.001.00---------------------------------------------------------------------------
............................................................................................................................................................TAGGCTTTGAGCAGTGGTCCCC........................................................................2211.001.00-1.00--------------------------------------------------------------------------
......................TTGGACCTTCTGGAGG....................................................................................................................................................................................................................1621.001.00-1.00--------------------------------------------------------------------------
........................................................................................................................................................................................TTTGGCACCAGGGACCACCT..............................................201.000.00---1.00------------------------------------------------------------------------
.............................................................................................................................................................AGGCTTTGAGCAGTGGTCCCCAACCT...................................................................2611.001.001.00---------------------------------------------------------------------------
.....................TTTGGACCTTCTGGAGGAAGTTGC.............................................................................................................................................................................................................2411.001.00-------------------------------------------1.00--------------------------------
..................................................GTGAGTTAGAGTAGGAAGCA....................................................................................................................................................................................2011.001.00---------------------------------------1.00------------------------------------
...........................................................................................................................................CCAGTTAACAGATACAATAGGC.........................................................................................2211.001.00--------------1.00-------------------------------------------------------------
....................CTTTGGACCTTCTGGAGGAAGTGGCA............................................................................................................................................................................................................2611.001.00--------1.00-------------------------------------------------------------------
................................TGGAGGAAGTGGCACCAAGTG.....................................................................................................................................................................................................2111.001.00---------------------------------------------------------1.00------------------
..........................................GGCACCAAGTGAGTTAGA..............................................................................................................................................................................................1811.001.00-------------------------------------------------------------1.00--------------
.............CTTCTGGCTTTGGACCTTCTGGAGGAAGTGGCA............................................................................................................................................................................................................3311.001.00-1.00--------------------------------------------------------------------------
.......................................................................AGACTAGTTTGGCTATTTCT...............................................................................................................................................................2011.001.00-----------------------------------------------------------------------1.00----
....................CTTTGGACCTTCTGGAGGAAGTG...............................................................................................................................................................................................................2311.001.00-------------------------------------------------------------------1.00--------
..................................................GTGAGTTAGAGTAGGAAGCAGAGACT..............................................................................................................................................................................2611.001.00---------------------1.00------------------------------------------------------
.....................TTTGGACCTTCTGGAG.....................................................................................................................................................................................................................1630.670.67-0.33-------------------------------0.33------------------------------------------
.......................TGGACCTTCTGGAGGAAG.................................................................................................................................................................................................................1820.500.50--------------------------------0.50-------------------------------------------
.......................TGGACCTTCTGGAGG....................................................................................................................................................................................................................1580.380.38--------0.25-------------------------0.12-----------------------------------------
..................................................GTGAGTTAGAGTAGG.........................................................................................................................................................................................1530.330.33----------------0.33-----------------------------------------------------------
........................GGACCTTCTGGAGGAAG.................................................................................................................................................................................................................1730.330.33--------------------------------------------------------------------------0.33-
.................................................AGTGAGTTAGAGTAG..........................................................................................................................................................................................1540.250.25---------------------------------------------------------------------------0.25

Antisense strand
GCTGCTTTAGGCCCTTCTGGCTTTGGACCTTCTGGAGGAAGTGGCACCAAGTGAGTTAGAGTAGGAAGCAGAGACTAGTTTGGCTATTTCTGTCTCTCTGGGGGATGCCATCTCTCTTTGCAAAGATAATTCTAAATGGCCAGTTAACAGATACAATAGGCTTTGAGCAGTGGTCCCCAACCTTTTTGGCACCAGGGACCAGTTTCGTGGAAGACAGATTTTACCACAGACAGGGTTTGAGGGGATGGTT
........................................................(((((.((...(((((((.(((.....))))))))))))))))).((....)).............................................................................................................................................
..................................................51..........................................................111.........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR037936(GSM510474)
293cand1. (cell line)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR029124(GSM416753)
HeLa. (hela)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		GSM956925PAZD5SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR038857(GSM458540)
D20. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038863(GSM458546)
MM603. (cell line)		TAX577738(Rovira)
total RNA. (breast)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR038856(GSM458539)
D11. (cell line)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
......................................................................................................................................................................GCAGTGGTCCCCAACCTTTAGTG............................................................. 232.000.002.00---------------------------------------------------------------------------
.......................................................................................................................................................................CAGTGGTCCCCAACCTTTTACTC............................................................ 231.000.001.00---------------------------------------------------------------------------