ID: uc010jsl.2_intron_1_0_chr6_31237163_r.3p
GENE: (5)
chr6:31237113-31237362-


(1)
AGO2.ip 		(12)
B-CELL 		(1)
BRAIN 		(21)
BREAST 		(21)
CELL-LINE 		(14)
CERVIX 		(3)
FIBROBLAST 		(5)
HEART 		(9)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
UTERUS

Sense strand
CCTAAGATCACATGGCCCTGCCTCCTCCCAGTCCCCTCATAGGGCATTTTCTTCCCACAGGTGGAAAAGGAGGGAGCTGCTCTCAGGCTGCGTGTAAGTGATGGCGGCGGGCGTGTGGAGGAGCTCACCTACTCCATAATTCCTCTTGTCCCACATCTCCTGCGGGCTCTGACCAGGTCTTTTTTTTTGTTCTACCCCAGGCAGCAACAGTGCCCAGGGCTCTGATGAGTCTCTCATCACTTGTAAAGGT
...........................................................((((((((((((((((.(((.((..((.(((((.....(((.(((.((((((..(((((((.((.....)).)))))))......))))))))))))....))))).))..)).))).))))))))))...))))))......................................................
.......................................................56..............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM532876(GSM532876)
G547T. (cervix)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189783SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040037(GSM532922)
G243T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577746(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR040018(GSM532903)
G701N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		TAX577743(Rovira)
total RNA. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532890(GSM532890)
G576T. (cervix)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
............................................................GTGGAAAAGGAGGGAGCTGCT.........................................................................................................................................................................2115.005.001.001.003.00---------------------------------------------------------------------------------------------------------
...................................................................AGGAGGGAGCTGCTCTCAGG...................................................................................................................................................................2014.004.00----------------1.00-------------------------------1.001.00-----------1.00----------------------------------------------
............................................................GTGGAAAAGGAGGGAGCTG...........................................................................................................................................................................1924.004.002.50---0.50-----------------------0.50-----------------------------------------------------------------0.50-------------
..........................................................AGGTGGAAAAGGAGGGAGCTG...........................................................................................................................................................................2114.004.004.00-----------------------------------------------------------------------------------------------------------
...................................................................AGGAGGGAGCTGCTCTCAGGC..................................................................................................................................................................2113.003.00----------1.00--------1.00----1.00-----------------------------------------------------------------------------------
..........................................................AGGTGGAAAAGGAGGGAG..............................................................................................................................................................................1842.252.25----0.25----------0.250.50-----------0.50---------0.25--------------------------------------------0.25--------------0.25---------
...................................................................AGGAGGGAGCTGCTCTCAGGCTGCGCG............................................................................................................................................................272.000.00---1.00--------1.00-----------------------------------------------------------------------------------------------
............................................................GTGGAAAAGGAGGGAGCTGCTC........................................................................................................................................................................2212.002.00-2.00----------------------------------------------------------------------------------------------------------
..................................................................AAGGAGGGAGCTGCTCTCAGG...................................................................................................................................................................2112.002.00---------1.00-----------------------------------------------------------------------1.00--------------------------
..................................................................AAGGAGGGAGCTGCTCTCAG....................................................................................................................................................................2012.002.00--1.00-------------------------------------------------------------------------------1.00-------------------------
..............................................................GGAAAAGGAGGGAGCTGCTCTCAGGCTGC...............................................................................................................................................................2912.002.00--------------1.00-----------------------------------1.00---------------------------------------------------------
.........................................................................................................................................................................................TTTGTTCTACCCCAGA.................................................162.000.00----------------------------------1.00------------------------1.00------------------------------------------------
..................................................................AAGGAGGGAGCTGCTCTCAGGCTGC...............................................................................................................................................................2512.002.00--1.00------1.00--------------------------------------------------------------------------------------------------
..........................................................AGGTGGAAAAGGAGGGAGCT............................................................................................................................................................................2032.002.000.33-0.33------------------------0.67----0.33-----0.33---------------------------------------------------------------------
...........................................................GGTGGAAAAGGAGGGAGCT............................................................................................................................................................................1932.002.000.670.33--------------------------0.33--0.33-0.33--------------------------------------------------------------------------
............................................................GTGGAAAAGGAGGGAGCT............................................................................................................................................................................1851.601.600.60---0.20-----------------------0.20----------------------------------------------------------------------0.200.20-0.20-----
.............................................................TGGAAAAGGAGGGAGCTGCTC........................................................................................................................................................................2121.501.50----------------0.50---------------------------------------------------------------------0.50------0.50--------------
.........................................................CAGGTGGAAAAGGAGGGAG..............................................................................................................................................................................1941.251.25-1.00-----------------------------------------------------------------------------------------0.25----------------
...................................................................AGGAGGGAGCTGCTCTCAGGCCGCG..............................................................................................................................................................2511.003.00------------1.00-----------------------------------------------------------------------------------------------
................................................................AAAAGGAGGGAGCTGCTCTCAGGCTG................................................................................................................................................................2611.001.00---------------------------------------------------------------------------1.00--------------------------------
....................................................................................................................................................................................TTTTTTTTGTTCTACCCCAG..................................................2011.001.00--------------------------------------------------------------------1.00---------------------------------------
...............................................................GAAAAGGAGGGAGCTGCTCTCAG....................................................................................................................................................................2311.001.00-----------------------------------------1.00------------------------------------------------------------------
...................................................................AGGAGGGAGCTGCTCTC......................................................................................................................................................................1711.001.00-------------------------------------------------------------------1.00----------------------------------------
.................................................................................................................................................................................................................GTGCCCAGGGCTCTGATGAG.....................2011.001.00----------------------------------------------1.00-------------------------------------------------------------
..............................................................................................................................................................................AGGTCTTTTTTTTTGGGTC.........................................................191.000.00---1.00--------------------------------------------------------------------------------------------------------
.......................................................................GGGAGCTGCTCTCAGGCTGCGTCCA..........................................................................................................................................................251.000.00--------------------------------1.00---------------------------------------------------------------------------
.............................................................................................GTAAGTGATGGCGGCGGGCGTGTGGAGAA................................................................................................................................291.000.00-------------------1.00----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................TCTGATGAGTCTCTCAT.............1711.001.00------------------------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................................................CAGTGCCCAGGGCTCTGATGG......................211.000.00---------------------------------------1.00--------------------------------------------------------------------
.................................................................AAAGGAGGGAGCTGCTCTCAGGC..................................................................................................................................................................2311.001.00----------1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTTTTTTGTTCTACGCTT...................................................191.000.00---------------------------------------------------------1.00--------------------------------------------------
............................................................GTGGAAAAGGAGGGAGCTGC..........................................................................................................................................................................2011.001.00---------------------------1.00--------------------------------------------------------------------------------
..........................................................................................................................................................................................................AGCAACAGTGCCCAGGGCCAT...........................211.000.00--------------------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................................................TGCCCAGGGCTCTGATGAGTCTCTCATCGC..........301.000.00-----------------------------------1.00------------------------------------------------------------------------
......................................................................................................GGCGGCGGGCGTGTGGGGT.................................................................................................................................191.000.00-----------------------------------------------1.00------------------------------------------------------------
...........................................................GGTGGAAAAGGAGGGAGCTGATA........................................................................................................................................................................231.000.00-1.00----------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TGATGAGTCTCTCATCACT.........1911.001.00------------------------------------------1.00-----------------------------------------------------------------
.................................................................AAAGGAGGGAGCTGCTCTCA.....................................................................................................................................................................2011.001.00----------------------------------------------------------------------1.00-------------------------------------
..................................................................AAGGAGGGAGCTGCTCTCAGGCTG................................................................................................................................................................2411.001.00-1.00----------------------------------------------------------------------------------------------------------
..........................................................AGGTGGAAAAGGAGGGAGCTGCT.........................................................................................................................................................................2311.001.00-----------------------------------------------------1.00------------------------------------------------------
................................................................AAAAGGAGGGAGCTGCTCTCAGGCTGC...............................................................................................................................................................2711.001.00------------------------1.00-----------------------------------------------------------------------------------
............................................................GTGGAAAAGGAGGGAGCTGCTCT.......................................................................................................................................................................2311.001.00---------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TGAGTCTCTCATCACTTG.......1811.001.00--------------------------------------------------------------1.00---------------------------------------------
...............................................................GAAAAGGAGGGAGCTGCTCTCAGG...................................................................................................................................................................2411.001.00-------------------------------------1.00----------------------------------------------------------------------
.................................................................................................................................................................................TCTTTTTTTTTGTTCTACTC.....................................................201.000.00---1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................GCGGCGGGCGTGTGGTG..................................................................................................................................1721.000.50-----------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................................................GTCTTTTTTTTTGTTGGT........................................................181.000.00----------------------------------------------------------------------------1.00-------------------------------
...........................................................................................................................................................................ACCAGGTCTTTTTTTTTTTTA..........................................................211.000.00---1.00--------------------------------------------------------------------------------------------------------
..........................................................AGGTGGAAAAGGAGGGAGC.............................................................................................................................................................................1931.001.00-0.33---------------------------------------------------------------------------------0.33-------------0.33----------
......................................................................................................................................................................................................................................CTCTCATCACTTGTAAAG..1811.001.00-----------------------------------------------------------------------1.00------------------------------------
...............................................................................................................................................................................................................................GATGAGTCTCTCATCACTT........1911.001.00-----1.00------------------------------------------------------------------------------------------------------
......................................................................................................GGCGGCGGGCGTGTGTG...................................................................................................................................171.000.00-----1.00------------------------------------------------------------------------------------------------------
...........................................................GGTGGAAAAGGAGGGAGCTGCTCTCAGGC..................................................................................................................................................................2911.001.00------------------------------------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................TCTTTTTTTTTGTTCTACCCCAG..................................................2311.001.00----------------------------------------------------------------1.00-------------------------------------------
......................................................................................................................................................................................TTTTTTGTTCTACCCCAGGCAG..............................................2211.001.00---1.00--------------------------------------------------------------------------------------------------------
.............................................................TGGAAAAGGAGGGAGCTGCTCTCAGGC..................................................................................................................................................................2711.001.00-----------------------------------------------------------------------------1.00------------------------------
.................................................................................................................................................................................TCTTTTTTTTTGTTCGGTC......................................................191.000.00---1.00--------------------------------------------------------------------------------------------------------
...........................................................GGTGGAAAAGGAGGGAGCTGCT.........................................................................................................................................................................2211.001.00--1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ACAGTGCCCAGGGCTCTGATGAGTCTCT................2811.001.00---------1.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ACAGTGCCCAGGGCTCTTT.........................191.000.00--------------------1.00---------------------------------------------------------------------------------------
............................................................................CTGCTCTCAGGCTGCGT.............................................................................................................................................................1711.001.00----------------------------------------1.00-------------------------------------------------------------------
.....................................................................................................................GAGGAGCTCACCTACTAGTA.................................................................................................................201.000.00--------------------------------------------------------1.00---------------------------------------------------
......................................................................................................GGCGGCGGGCGTGTGCTGC.................................................................................................................................191.000.00-----1.00------------------------------------------------------------------------------------------------------
......................................................................AGGGAGCTGCTCTCAGGCT.................................................................................................................................................................1911.001.00---------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GTGCCCAGGGCTCTGATGAGT....................2111.001.00--------------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CTGATGAGTCTCTCATCAC..........1911.001.00------------------------------------------------------------------1.00-----------------------------------------
........................................................................GGAGCTGCTCTCAGGCTGC...............................................................................................................................................................1911.001.00-----------------1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................AGGTCTTTTTTTTTGTTTGT........................................................201.000.00------------1.00-----------------------------------------------------------------------------------------------
...................................................................AGGAGGGAGCTGCTCTCAG....................................................................................................................................................................1911.001.001.00-----------------------------------------------------------------------------------------------------------
................................................................AAAAGGAGGGAGCTGCTCTCAGGCC.................................................................................................................................................................251.000.00---1.00--------------------------------------------------------------------------------------------------------
......................................................................................................GGCGGCGGGCGTGTGGTAAG................................................................................................................................201.000.00-----1.00------------------------------------------------------------------------------------------------------
..................................................................AAGGAGGGAGCTGCTCTCAGGCT.................................................................................................................................................................2311.001.00-1.00----------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GTGCCCAGGGCTCTGATGAGTCTC.................2411.001.00------------------------------1.00-----------------------------------------------------------------------------
..............................................................GGAAAAGGAGGGAGCTGCTCTCAGGCT.................................................................................................................................................................2711.001.00---------------------------------------------------------------------1.00--------------------------------------
...............................................................................................................CGTGTGGAGGAGCTCGG..........................................................................................................................171.000.00-------------------------------------------------------------------------1.00----------------------------------
.............................................................TGGAAAAGGAGGGAGCTG...........................................................................................................................................................................1840.750.750.25---0.25--------------------------------------------------------------------------------------0.25----------------
................................................................AAAAGGAGGGAGCTGCTC........................................................................................................................................................................1830.670.67----0.33-------------------------------------------------------------------------------------------0.33-----------
...........................................................................................................................................................................................................GCAACAGTGCCCAGGGCTCTGAT........................2320.500.50---------------------------------------------------------------------------------------0.50--------------------
.............................................................................................................................................................TCCTGCGGGCTCTGACCAGG.........................................................................2020.500.50-----------------------------0.50------------------------------------------------------------------------------
...........................................................................................................................................................................................................GCAACAGTGCCCAGGGCTCT...........................2020.500.50--0.50---------------------------------------------------------------------------------------------------------
.............................................................TGGAAAAGGAGGGAGCTGCT.........................................................................................................................................................................2020.500.50--0.50---------------------------------------------------------------------------------------------------------
..............................................................GGAAAAGGAGGGAGCTGCT.........................................................................................................................................................................1920.500.50--------------------------------------0.50---------------------------------------------------------------------
...............................................................GAAAAGGAGGGAGCTGCTC........................................................................................................................................................................1920.500.50-0.50----------------------------------------------------------------------------------------------------------
...........................................................GGTGGAAAAGGAGGGAGC.............................................................................................................................................................................1840.500.50--0.25--------------------------------------------------------------------------------0.25------------------------
......................................................................AGGGAGCTGCTCTCAGGC..................................................................................................................................................................1820.500.50----------0.50-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GCAGCAACAGTGCCCAGGGC..............................2020.500.50-----0.50------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AGCAACAGTGCCCAGGGCTCTGA.........................2320.500.50-------------------------------------------------------------------------------------0.50----------------------
.......................................................................................................GCGGCGGGCGTGTGG....................................................................................................................................1520.500.50----------0.50-------------------------------------------------------------------------------------------------
.....................................................................GAGGGAGCTGCTCTCAGGC..................................................................................................................................................................1920.500.50-----------------------------------------------------------------------------------------------0.50------------
..................................CCTCATAGGGCATTTTCTTCCC..................................................................................................................................................................................................2220.500.50----------------------------------------------------------------------------------------0.50-------------------
.........................................................................................................................................................................................................CAGCAACAGTGCCCAGGGCT.............................2020.500.50-----------------------------------------------------------------------------------------0.50------------------
......................................................................AGGGAGCTGCTCTCAGG...................................................................................................................................................................1750.400.40----------------------------------0.20------------------------------------------------------------------0.20------
..........................................................................................................................................................................................................AGCAACAGTGCCCAGGG...............................1730.330.33------------------------------0.33-----------------------------------------------------------------------------
..............................................................GGAAAAGGAGGGAGCTGC..........................................................................................................................................................................1830.330.33-----0.33------------------------------------------------------------------------------------------------------
.........................................................CAGGTGGAAAAGGAGGGAGC.............................................................................................................................................................................2030.330.33--------------0.33---------------------------------------------------------------------------------------------
.........................................................CAGGTGGAAAAGGAGGG................................................................................................................................................................................1740.250.25-----0.25------------------------------------------------------------------------------------------------------
.........................................................CAGGTGGAAAAGGAGGGA...............................................................................................................................................................................1840.250.25--0.25---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AGTGCCCAGGGCTCTGAT........................1850.200.20----0.20-------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................ACAGTGCCCAGGGCTCTG..........................1860.170.17----0.17-------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................AGTGCCCAGGGCTCTGA.........................1760.170.17-----------------------------------0.17------------------------------------------------------------------------
...........................................................GGTGGAAAAGGAGGGAG..............................................................................................................................................................................1760.170.17-------------------------------------------------------------------------------------------------------0.17----
.......................................................................................................................................................................................TTTTTGTTCTACCCCAG..................................................1770.140.14--------------------------------------------------------------------------------------------------------0.14---
............................................................GTGGAAAAGGAGGGAGC.............................................................................................................................................................................1770.140.14------------------------------------0.14-----------------------------------------------------------------------
..................................................................................................................................................................................................................TGCCCAGGGCTCTGAT........................1670.140.14-------------------------------------0.14----------------------------------------------------------------------
..................................................................................................................................................................................................................TGCCCAGGGCTCTGATG.......................1770.140.14----------------------------------------------------------------------------------------------------------0.14-
.............................................................TGGAAAAGGAGGGAGCT............................................................................................................................................................................1770.140.14---------------------------------------------------------------------------------------------------------0.14--
...............................................................................................................................................................................................................CAGTGCCCAGGGCTCTG..........................1790.110.11-----------------------------------------------------------------------------------------------------------0.11

Antisense strand
CCTAAGATCACATGGCCCTGCCTCCTCCCAGTCCCCTCATAGGGCATTTTCTTCCCACAGGTGGAAAAGGAGGGAGCTGCTCTCAGGCTGCGTGTAAGTGATGGCGGCGGGCGTGTGGAGGAGCTCACCTACTCCATAATTCCTCTTGTCCCACATCTCCTGCGGGCTCTGACCAGGTCTTTTTTTTTGTTCTACCCCAGGCAGCAACAGTGCCCAGGGCTCTGATGAGTCTCTCATCACTTGTAAAGGT
...........................................................((((((((((((((((.(((.((..((.(((((.....(((.(((.((((((..(((((((.((.....)).)))))))......))))))))))))....))))).))..)).))).))))))))))...))))))......................................................
.......................................................56..............................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		GSM532876(GSM532876)
G547T. (cervix)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR038855(GSM458538)
D10. (cell line)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR189783SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029127(GSM416756)
A549. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR040037(GSM532922)
G243T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577740(Rovira)
total RNA. (breast)		SRR037938(GSM510476)
293Red. (cell line)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR191561(GSM715671)
80genomic small RNA (size selected RNA from t. (breast)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040039(GSM532924)
G531T. (cervix)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040035(GSM532920)
G001T. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)		SRR040019(GSM532904)
G701T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR038858(GSM458541)
MEL202. (cell line)		SRR040007(GSM532892)
G601T. (cervix)		SRR191580(GSM715690)
103genomic small RNA (size selected RNA from . (breast)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		SRR191399(GSM715509)
36genomic small RNA (size selected RNA from t. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR191571(GSM715681)
63genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		TAX577746(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR040018(GSM532903)
G701N. (cervix)		SRR040010(GSM532895)
G529N. (cervix)		TAX577743(Rovira)
total RNA. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532890(GSM532890)
G576T. (cervix)		SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCCAAA................................................. 2211.000.00----4.00-2.002.001.00---------2.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCCA................................................... 205.000.00-------2.001.00------------------------------------1.00----------------------------1.00---------------------------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCCAAAA................................................ 235.000.00---------------------2.00------------------------------1.00-1.00----------1.00------------------------------------------
...................................................................................................................................................................................GGGGTAGAACAAAAAAAAA.................................................... 1915.005.00------1.001.00--------------1.001.00-1.00----------------------------------------------------------------------------------
....................................................................................................................................................................................GGGGTAGAACAAAAAAAA.................................................... 1814.004.00--------1.00----------------1.00-----------------------------------------------------1.001.00---------------------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCCAA.................................................. 214.000.00------2.00----------------1.00-------------------------------1.00----------------------------------------------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCCAGAAA............................................... 243.000.00-------------3.00----------------------------------------------------------------------------------------------
........................................................................................................CGGCGGGCGTGTGGAGGATC.............................................................................................................................. 203.000.00-----------3.00------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCCAAAAA............................................... 242.000.00--------1.00-----------------1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCCAAAA................................................ 232.000.00----------------------1.00---1.00---------------------------------------------------------------------------------
.....................................................................GAGGGAGCTGCTCTCGCA................................................................................................................................................................... 181.000.00-------------------------------1.00----------------------------------------------------------------------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCAAA.................................................. 211.000.00------------------------------------------------------------1.00-----------------------------------------------
.................CTGCCTCCTCCCAGTTTGG...................................................................................................................................................................................................................... 191.000.00---------------------------------1.00--------------------------------------------------------------------------
...................................................................................................................................................................................GGGTAGAACAAAAAAAAA..................................................... 1811.001.00--------------------------------------------1.00---------------------------------------------------------------
.....................................................................................................................................................................................GGGGTAGAACAAAAAAA.................................................... 1721.001.00------------------------------------------------------------------------------------------0.50-0.50---------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCA.................................................... 191.000.00----1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................AGCAACAGTGCCCAGCG............................... 171.000.00------------------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................................................................TTTTTTTGTTCTACCCCAA.................................................. 191.000.00----------------------------------------------------------1.00-------------------------------------------------
...................................................................................................................................................................................TTTTTTTTTGTTCTACCCAA................................................... 201.000.00-------------------------------------------1.00----------------------------------------------------------------
.....................................................................GAGGGAGCTGCTCTCGCT................................................................................................................................................................... 181.000.00-----------------1.00------------------------------------------------------------------------------------------
.........................................................................................................GGCGGGCGTGTGGAGGCT............................................................................................................................... 181.000.00---------------------------------------------------1.00--------------------------------------------------------
....................................................................................................................................................................................TGGGGTAGAACAAAAAAAA................................................... 1911.001.00---------------------------------------------------------------1.00--------------------------------------------
.................GGGACTGGGAGGAGGCAG....................................................................................................................................................................................................................... 1830.670.67------------------------------------------------------------------------------------0.67-----------------------