ID: uc010jsa.1_intron_5_0_chr6_30309674_f.3p
GENE: (6)
chr6:30312875-30313124+


(1)
AGO2.ip 		(19)
B-CELL 		(1)
BRAIN 		(13)
BREAST 		(25)
CELL-LINE 		(3)
CERVIX 		(4)
HEART 		(3)
HELA 		(1)
KIDNEY 		(6)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(21)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGAGGCCTCGCGCGGACGCCCGGGCGGGGCTGTGCGAGGGGTGGGGCTGCGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCACGGGGACGGTGCTCGGCGTCCCAGAGTGACTGCTCCCCTCCCGCAGGCCGCCCATTGTGTCCTTGCCCAGGACCCCGAGAACCAGGCGCTGGCGAG
.................................................................................((((...(((((.((....)))))))...(((((((....((((...)))))))))))........)))).....((((((........))))))..........................................................................
.................................................................................82............................................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM532874(GSM532874)
G699T. (cervix)		SRR189782SRR040023(GSM532908)
G575T. (cervix)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)		SRR191583(GSM715693)
97genomic small RNA (size selected RNA from t. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)
.....................................................................................................................................................CCCCACGGGGACGGTGCTCGGCG..............................................................................23121.0021.008.00--1.00---1.00--1.001.00--1.00---1.00---1.00-------2.002.00--1.00-----------------------------------------------------------1.00------
.....................................................................................................................................................CCCCACGGGGACGGTGCTCGGC...............................................................................2218.008.001.00--2.00------1.00----2.00------------------------1.00-------------1.00----------------------------------------------
.........................................................................................................................................................ACGGGGACGGTGCTCGGCG..............................................................................1917.007.00--------------------------2.00------2.00-2.00------------------------------------------1.00----------------------
..............................................................................................................................................................................................................................AGGACCCCGAGAACCAGGCGA.......2115.002.00-5.00---------------------------------------------------------------------------------------------------
......................................................................................GTGAAGGACCGCGAGGC...................................................................................................................................................1715.005.00----2.00------------2.00-----------------------------------1.00-----------------------------------------------
.......................................................................................................................................................................CGGCGTCCCAGAGTGACTG................................................................1914.004.00--1.00-----------1.00-1.00------------------------------------------------------------------1.00-----------------
........................................................................................................................................................CACGGGGACGGTGCTCGGCG..............................................................................2014.004.00------1.00----1.00--1.00----------------------------------1.00---------------------------------------------------
....................................................................................................................................................GCCCCACGGGGACGGTGCTCGGCG..............................................................................2414.004.002.00-----1.00------------1.00---------------------------------------------------------------------------------
......................................................................................................................................................CCCACGGGGACGGTGCTCGG................................................................................2014.004.00-----1.001.001.00-----------1.00---------------------------------------------------------------------------------
......................................................................................................................................................CCCACGGGGACGGTGCTCGGCG..............................................................................2214.004.001.00--1.00-----2.00-------------------------------------------------------------------------------------------
...............................................................................GGGGCCGGTGAAGGACCGC........................................................................................................................................................1914.004.00----3.00------------------------------------------------------------------1.00-----------------------------
................................................................................................................................................AAGGGCCCCACGGGGACGGTG.....................................................................................2113.003.00--------------------3.00--------------------------------------------------------------------------------
......................................................................................................................................................CCCACGGGGACGGTGCTCG.................................................................................1913.003.00---1.00------------------------------------------------------------1.00-----------------------1.00------------
.........................................................................................................................................CTGCGACAAGGGCCCCACGGG............................................................................................2113.003.001.00--2.00-------------------------------------------------------------------------------------------------
.....................................................................................GGTGAAGGACCGCGAGGC...................................................................................................................................................1813.003.00--2.00-----------------------------------------1.00--------------------------------------------------------
.................................................................................................................CTCAACTTCCTGTACCAGG......................................................................................................................1913.003.00-3.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CCCAGAGTGACTGCTCCCCTCCCGCAGC.................................................283.000.00-----3.00-----------------------------------------------------------------------------------------------
..........................................................................................................................CTGTACCAGGTGAGTCTGCGACAAG.......................................................................................................2512.002.00--1.00----------------------------------------------------------------------1.00---------------------------
.....................................................................................................................................................CCCCACGGGGACGGTGCT...................................................................................1812.002.00-------------1.00-------------------------------------------1.00-------------------------------------------
......................................................................................................................................................CCCACGGGGACGGTGCTC..................................................................................1812.002.00---------------------------------------------------------------------------1.00-------------------1.00-----
.....................................................................................................................................GAGTCTGCGACAAGGGCC...................................................................................................1812.002.00--1.00---------------------------------------------------------------------------------------1.00----------
..................................................................................GCCGGTGAAGGACCGC........................................................................................................................................................1612.002.00--1.00-------------------------------1.00------------------------------------------------------------------
........................................................................................................................................................CACGGGGACGGTGCTCGG................................................................................1812.002.00------------------1.00--------1.00-------------------------------------------------------------------------
.....................................................................................................................................................CCCCACGGGGACGGTGCTCGGCGT.............................................................................2412.002.00-------2.00---------------------------------------------------------------------------------------------
.............................................................................................ACCGCGAGGCCTTCCAGAGG.........................................................................................................................................2012.002.00-------------------------------------------------------------1.00-1.00-------------------------------------
.............................................................................................................................................................................................................................CAGGACCCCGAGAACCAGGCGC.......2212.002.00--1.00-----------------------------------------------------------1.00--------------------------------------
........................................................................................................................................................CACGGGGACGGTGCTCGGCGT.............................................................................2112.002.00--------1.00----1.00---------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGGACCCCGAGAACCAGGCG........2012.002.00----------------------1.00-1.00----------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGGACCCCGAGAACCAGG..........1812.002.00-----2.00-----------------------------------------------------------------------------------------------
.......................................................................................................CTTCCAGAGGCTCAACTT.................................................................................................................................1812.002.00------------------------------------------1.00------------------------------------------1.00---------------
.................................................................................................................................................AGGGCCCCACGGGGACGG.......................................................................................1812.002.00---1.00-------------------------------------------------------------------------1.00-----------------------
...................................................................................................................................................GGCCCCACGGGGACGGTGCTCGGCG..............................................................................2512.002.00---1.00--1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CAGGACCCCGAGAACCAGGCGCT......2312.002.00-----------------------1.00---------------------------1.00-------------------------------------------------
.............................................................................GCGGGGCCGGTGAAGGAC...........................................................................................................................................................1812.002.00---------------------1.00-----------------------------------------------------------------------1.00-------
......................................................................................................................................................CCCACGGGGACGGTGCTCGGC...............................................................................2111.001.00----------1.00------------------------------------------------------------------------------------------
.............................................................................GCGGGGCCGGTGAAGGACCG.........................................................................................................................................................2011.001.001.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CCCAGAGTGACTGCTCCC...........................................................1811.001.00-----------------------------1.00-----------------------------------------------------------------------
.................................................................................................................CTCAACTTCCTGTACCAG.......................................................................................................................1811.001.00----1.00------------------------------------------------------------------------------------------------
.......................................................................................................................TTCCTGTACCAGGTGAG..................................................................................................................1721.001.00----1.00------------------------------------------------------------------------------------------------
.............................................................................................ACCGCGAGGCCTTCCAGA...........................................................................................................................................1811.001.00--------------------------------------------------------1.00--------------------------------------------
..................................................................................GCCGGTGAAGGACCGCGAGGCCTTCCAGAGGC........................................................................................................................................3211.001.00-1.00---------------------------------------------------------------------------------------------------
............................................................GGAGCGCGGCGGTGATTTTT..........................................................................................................................................................................201.000.00----------------------------------------1.00------------------------------------------------------------
....................................................................................................................AACTTCCTGTACCAGGTGAGTCTGCGACAAG.......................................................................................................3111.001.00--------------------------------------------------------------------1.00--------------------------------
.....................................................................................................................................................................CTCGGCGTCCCAGAGGGA...................................................................181.000.00-------------------------------------1.00---------------------------------------------------------------
................................................................................GGGCCGGTGAAGGACCGCGA......................................................................................................................................................2011.001.00--------------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................CTGCGACAAGGGCCCCACGGGGAC.........................................................................................2411.001.00-------------------------------------------------------1.00---------------------------------------------
................................................GCGGGAGGCCCTGGAGCATGC.....................................................................................................................................................................................211.000.00---------------------------------------------------------------------------------------1.00-------------
............................................................................................................................................................GGGACGGTGCTCGGCGTC............................................................................1811.001.001.00----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................CAGGACCCCGAGAACCAGGC.........2011.001.00------------1.00----------------------------------------------------------------------------------------
........................................................................................................................................................CACGGGGACGGTGCTCGGC...............................................................................1911.001.00----1.00------------------------------------------------------------------------------------------------
...........................................................................................................................................GCGACAAGGGCCCCACGGGGACGGTGC....................................................................................2711.001.00------1.00----------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TTGTGTCCTTGCCCAGGACCCCGAG.................2511.001.00-------------------------------------------------------------------------------1.00---------------------
.......................................................................GTGATGGCGGGGCCGGTGAA...............................................................................................................................................................2011.001.00---------------------1.00-------------------------------------------------------------------------------
...........................................................................................................CAGAGGCTCAACTTCCTG.............................................................................................................................1811.001.00------------------------------------1.00----------------------------------------------------------------
...........................................................................................................................................................GGGGACGGTGCTCGGCGTCCCAGAG......................................................................2511.001.00-------------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................GGGCCCCACGGGGACGGTGCTCGGCGTCCCAGA.......................................................................3311.001.00-----------------------------------------------------------------------------------------1.00-----------
............................................................................................................................................CGACAAGGGCCCCACGGGGACGGCG.....................................................................................251.000.00-----------1.00-----------------------------------------------------------------------------------------
........................................................................................................TTCCAGAGGCTCAACCTTG...............................................................................................................................191.000.00------------------------------------------------------------------1.00----------------------------------
................................................................................................................................................................................................................TTGTGTCCTTGCCCAGGACCCCGAGT................2611.001.00----------------------------------------------------------------------------------1.00------------------
.....................................................................................................................ACTTCCTGTACCAGGTCAG..................................................................................................................191.000.00--------------------------------------1.00--------------------------------------------------------------
..................................................GGGAGGCCCTGGAGCGCGGCG...................................................................................................................................................................................2111.001.00-----------------------------------------1.00-----------------------------------------------------------
.........................................................................................................................................CTGCGACAAGGGCCCCACGGGGA..........................................................................................2311.001.00-------------------------------------------------------------------------------------------1.00---------
...................................................................................................................CAACTTCCTGTACCAGGC.....................................................................................................................181.000.00----------------------------------------------------1.00------------------------------------------------
..........................................................................................................................CTGTACCAGGTGAGTCTGCGA...........................................................................................................2111.001.00------------------1.00----------------------------------------------------------------------------------
........................................................................................................................................TCTGCGACAAGGGCCC..................................................................................................1611.001.00--------------------------------------------------------------------------------------------1.00--------
..................................................................................................................................................................GTGCTCGGCGTCCCAGAGTGAC..................................................................2211.001.00--1.00--------------------------------------------------------------------------------------------------
............................................................................GGCGGGGCCGGTGAAGGACCGCGAGGCC..................................................................................................................................................2811.001.00---------------------------------------------------------------------1.00-------------------------------
..............................................................................................................................................................GACGGTGCTCGGCGTCCCAGA.......................................................................2111.001.00----------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................GCCCCACGGGGACGGTG.....................................................................................1711.001.00-------------------------------------------1.00---------------------------------------------------------
.....................................................................................................................................GAGTCTGCGACAAGGGCCCC.................................................................................................2011.001.00----------------1.00------------------------------------------------------------------------------------
..........................................................................................................CCAGAGGCTCAACTTCCTG.............................................................................................................................1911.001.00--------------------------------------------------------------------------------------1.00--------------
..............................................................AGCGCGGCGGTGATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCACGGGGACGGTG.....................................................................................10311.001.00------------------------------------------------------------------------------------------------1.00----
.............................................................................GCGGGGCCGGTGAAGGACCGCGAGGCCTTCCA.............................................................................................................................................3211.001.00---------------------------------------1.00-------------------------------------------------------------
......................................GGGTGGGGCTGCGGGAT...................................................................................................................................................................................................171.000.00-----------------------------------------------------------------1.00-----------------------------------
........................................................................TGATGGCGGGGCCGGTG.................................................................................................................................................................1711.001.00---------1.00-------------------------------------------------------------------------------------------
..............................................CTGCGGGAGGCCCTGGAG..........................................................................................................................................................................................1811.001.00-------------------------------------------------------------------1.00---------------------------------
.......................................................................................................................................GTCTGCGACAAGGGC....................................................................................................1511.001.00----------------------------------------------------------1.00------------------------------------------
................................................................................................................................................................CGGTGCTCGGCGTCCCAGA.......................................................................1911.001.00-----------------------------------------------------------1.00-----------------------------------------
................................................................................................................................CAGGTGAGTCTGCGACAA........................................................................................................1811.001.00-------------------------------------1.00---------------------------------------------------------------
.............................................................................GCGGGGCCGGTGAAGGA............................................................................................................................................................1711.001.00----------------------------------------------------------------------1.00------------------------------
........................................................................................................................................TCTGCGACAAGGGCCCCACGGGGACGG.......................................................................................2711.001.00-----------------1.00-----------------------------------------------------------------------------------
........................................................CCCTGGAGCGCGGCGGT.................................................................................................................................................................................1711.001.00------------------------------------1.00----------------------------------------------------------------
.......................................................................GTGATGGCGGGGCCGGTGA................................................................................................................................................................1911.001.00---------------------------------------------------------------------------------1.00-------------------
.................................................................................................................................................................................GAGTGACTGCTCCCCTC........................................................1711.001.00--1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................................CGGGGACGGTGCTCGGCGTC............................................................................2011.001.00----------------------------1.00------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGGACCCCGAGAACCAGGCGCTGGC...2511.001.00-----------------------1.00-----------------------------------------------------------------------------
..........................................................CTGGAGCGCGGCGGTGGTTT............................................................................................................................................................................201.000.00--------------------------------------------------------------------------------1.00--------------------
.........................................................................................................TCCAGAGGCTCAACTTCCT..............................................................................................................................1911.001.00--------------------------------------------------1.00--------------------------------------------------
.............................................................................GCGGGGCCGGTGAAGGAA...........................................................................................................................................................1811.001.00----------------------------------------------------------------------------1.00------------------------
.................................................................................................................................................AGGGCCCCACGGGGACGGTG.....................................................................................2011.001.00-----------------------------1.00-----------------------------------------------------------------------
........................................................................................................................................TCTGCGACAAGGGCCCCACG..............................................................................................2011.001.00------------------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................CTCGGCGTCCCAGAGTGACT.................................................................2011.001.00-------------1.00---------------------------------------------------------------------------------------
.......................................................................................................................................................CCACGGGGACGGTGCTCGGCG..............................................................................2111.001.00------------1.00----------------------------------------------------------------------------------------
............................................................................GGCGGGGCCGGTGAAGGAC...........................................................................................................................................................1911.001.00---------------------1.00-------------------------------------------------------------------------------
.......................................................................................................................TTCCTGTACCAGGTGAGTCTGC.............................................................................................................2211.001.00---------------------------------------------1.00-------------------------------------------------------
.....................................................................................................................................................CCCCACGGGGACGGTGCTCGGCA..............................................................................2311.008.001.00----------------------------------------------------------------------------------------------------
..........................................................................................................................................................................CGTCCCAGAGTGACTGCTC.............................................................1911.001.00--------------------------------------------------------------------------1.00--------------------------
.....................................................................................................................ACTTCCTGTACCAGGTGAG..................................................................................................................1911.001.00--------------------------------------1.00--------------------------------------------------------------
..............................................................................................................................................................................CCAGAGTGACTGCTCGTGA.........................................................191.000.00------------------------------------------------1.00----------------------------------------------------
....................................................................................................................................TGAGTCTGCGACAAGGGC....................................................................................................1811.001.00-1.00---------------------------------------------------------------------------------------------------
............................................................................................................................................CGACAAGGGCCCCACGGG............................................................................................1811.001.00--------1.00--------------------------------------------------------------------------------------------
................................................................................GGGCCGGTGAAGGACCGC........................................................................................................................................................1811.001.00--1.00--------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................AGGACCCCGAGAACCAGGCGCTGGCGAGGGT311.000.00-------------------------1.00---------------------------------------------------------------------------
........................................................................................................................................TCTGCGACAAGGGCCCCACGGG............................................................................................2211.001.00---------------------------1.00-------------------------------------------------------------------------
...................................................................................................................................GTGAGTCTGCGACAAGGG.....................................................................................................1811.001.00----------------------------------------------1.00------------------------------------------------------
................................................................................................................................................................................................................................GACCCCGAGAACCAGGCGCTGGCGA.2511.001.00-------------------------1.00---------------------------------------------------------------------------
...........................................................................................................................................................GGGGACGGTGCTCGGCGT.............................................................................1811.001.00------------1.00----------------------------------------------------------------------------------------
................................................................................GGGCCGGTGAAGGACCGCGAG.....................................................................................................................................................2111.001.00---------------------------------------1.00-------------------------------------------------------------
.....................................................................................................................................................CCCCACGGGGACGGTGCTCGG................................................................................2111.001.00---------------1.00-------------------------------------------------------------------------------------
............................................................................................................................................................................................CCCCTCCCGCAGGCCGCCCATTGTGT....................................2611.001.00--------------------------------1.00--------------------------------------------------------------------
..........................................................................................................................................................CGGGGACGGTGCTCGGC...............................................................................1711.001.00------------------------------------------------------------------------------------1.00----------------
...................................................................................................................................................................................GTGACTGCTCCCCTCCCGCAGGC................................................2311.001.00-----1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................GGGCCCCACGGGGACG........................................................................................1630.670.67-------------------------------------------------------------------------------------------------0.67---
.......................................................................................TGAAGGACCGCGAGGC...................................................................................................................................................1620.500.50--------------------------------------------------------------------------------------------------0.50--

Antisense strand
GGAGGCCTCGCGCGGACGCCCGGGCGGGGCTGTGCGAGGGGTGGGGCTGCGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCACGGGGACGGTGCTCGGCGTCCCAGAGTGACTGCTCCCCTCCCGCAGGCCGCCCATTGTGTCCTTGCCCAGGACCCCGAGAACCAGGCGCTGGCGAG
.................................................................................((((...(((((.((....)))))))...(((((((....((((...)))))))))))........)))).....((((((........))))))..........................................................................
.................................................................................82............................................................................................176........................................................................
SizePerfect hitTotal NormPerfect NormSRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR033731(GSM497076)
h929 Cell line (h929). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR037936(GSM510474)
293cand1. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		GSM532874(GSM532874)
G699T. (cervix)		SRR189782SRR040023(GSM532908)
G575T. (cervix)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)		SRR191583(GSM715693)
97genomic small RNA (size selected RNA from t. (breast)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038859(GSM458542)
MM386. (cell line)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191438(GSM715548)
175genomic small RNA (size selected RNA from . (breast)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR191460(GSM715570)
33genomic small RNA (size selected RNA from t. (breast)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR037931(GSM510469)
293GFP. (cell line)
..................................................................................................................................................................GCAGTCACTCTGGGACGCCGAGCAC............................................................... 2512.002.00-2.00---------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................CGGCCTGCGGGAGGGGAGCAGTC.............................................. 2311.001.00--------1.00--------------------------------------------------------------------------------------------
............................................................................................................................................................................................TGGGCGGCCTGCGGGAGGGG.......................................... 2021.001.00---------------------------------------------------------------------------------------------------0.500.50
................CGCCCGGGCGGGGCTGTA........................................................................................................................................................................................................................ 181.000.00----------------1.00------------------------------------------------------------------------------------
..............GACGCCCGGGCGGGGCGCCC........................................................................................................................................................................................................................ 201.000.00-----------------------------------------------1.00-----------------------------------------------------
....................................................................................................................................................................GCTCGGCGTCCCAGAGTCGG.................................................................. 201.000.00------------------------------------------------------------------------1.00----------------------------
...........................................................................................................................................................................................TCCCCTCCCGCAGGCCGCCCAAA........................................ 231.000.00------------------------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................................TGGGCGGCCTGCGGGAGGG.......................................... 1920.500.50----------------------0.50------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CTCGGGGTCCTGGGC................. 1590.110.11-----------------------------------------0.11-----------------------------------------------------------