ID: uc010jpa.2_intron_0_0_chr6_11538608_f.5p
GENE: (1)
chr6:11538558-11538807+


(1)
B-CELL 		(1)
BRAIN 		(16)
BREAST 		(8)
CELL-LINE 		(6)
CERVIX 		(2)
HEART 		(4)
LIVER 		(2)
OTHER 		(33)
SKIN

Sense strand
GCAGGTCCTGAGCCTCTGGGCCCACGGGACGGTGCTGAGGAACCTCACGGGTAATTGACGCGCCTGGGCTGGGGACGGGGATGCGGTCCGCCCCTCTCCTGTCTTCTCCTTCCTCGGGAGGGGACACGCTCCTCGCCGCCCCACCCCCGTGCGCGCCCCGCTCGGAGCTCCAGGTCCCGGCGAGGAAGGTGTTAATCGGAGCCACTCTGCGCGTGTCCCGGGGGCGCCGGCTCCCGCCACCCCCTTCCCT
..............................................................................(((.(((.....((((((((.................))))))))...)))))).((((((.........))).)))...............................................................................................
..............................................................................79............................................................................157...........................................................................................
SizePerfect hitTotal NormPerfect NormSRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR343336SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR191477(GSM715587)
2genomic small RNA (size selected RNA from to. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR191511(GSM715621)
161genomic small RNA (size selected RNA from . (breast)		SRR040012(GSM532897)
G648N. (cervix)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
...................................................................................CGGTCCGCCCCTCTCCGGC....................................................................................................................................................19122.003.003.00----2.001.002.001.001.001.00------1.00--------1.00-1.00-----1.00--1.001.00--1.00-1.00-1.00--------1.00------1.00-------------
...................................................................................CGGTCCGCCCCTCTCCGG.....................................................................................................................................................1818.003.003.00---------------1.00---------------------------------1.00----1.00--1.00-1.00--------------
...................................................................................CGGTCCGCCCCTCTCCGGCC...................................................................................................................................................2017.003.00--1.00----1.001.00------------------1.00--------------1.00--------------1.00-1.00---------------
..........................................................................................................TCCTTCCTCGGGAGGGCG..............................................................................................................................1825.000.50-3.00--2.00----------------------------------------------------------------------
........................................................................................................................................................................................................................CCCGGGGGCGCCGGCGCGC...............195.000.00------------2.00-------1.00------------1.00---------------1.00-------------------------
.........................GGGACGGTGCTGAGGAACCTCACGGGTAATT..................................................................................................................................................................................................3113.003.00--3.00------------------------------------------------------------------------
...................................................................................CGGTCCGCCCCTCTCC.......................................................................................................................................................1613.003.00---1.00----------1.00--1.00---------------------------------------------------------
..........................................................................................................TCCTTCCTCGGGAGGGCGC.............................................................................................................................1923.000.50-1.00-------------------1.00------------------------1.00----------------------------
.......................ACGGGACGGTGCTGAGGAACCTCA...........................................................................................................................................................................................................2412.002.00------------------2.00--------------------------------------------------------
........................................................................................................................................................................................................................CCCGGGGGCGCCGGCGC.................172.000.00-------------1.00---------1.00---------------------------------------------------
...................................................................................CGGTCCGCCCCTCTCCGTC....................................................................................................................................................1912.003.00-----1.00---------------------------------------------1.00-----------------------
....................................................................................GGTCCGCCCCTCTCCGGC....................................................................................................................................................1821.501.000.50-------------------0.50------------------------------------------0.50-----------
...............................................................................................................................................................................CCCGGCGAGGAAGGT............................................................1521.001.00-------------------1.00-------------------------------------------------------
.............................................................................................................................................................................................................TCTGCGCGTGTCCCGGGGGCG........................2111.001.00-----------------------------1.00---------------------------------------------
.............................................................GCCTGGGCTGGGGACGGGGATGCG.....................................................................................................................................................................2411.001.00----------------------------------------1.00----------------------------------
...................................................................................CGGTCCGCCCCTCTCCCG.....................................................................................................................................................1811.003.00----------------1.00----------------------------------------------------------
...................................................................................CGGTCCGCCCCTCTCCGGA....................................................................................................................................................1911.003.00--------------------------------------------------------1.00------------------
............................ACGGTGCTGAGGAACCTCACGGA.......................................................................................................................................................................................................231.000.00---1.00-----------------------------------------------------------------------
.......................ACGGGACGGTGCTGAGGAACC..............................................................................................................................................................................................................2111.001.00------------------------1.00--------------------------------------------------
...........................GACGGTGCTGAGGAACCTCACGGG.......................................................................................................................................................................................................2411.001.00-----------------------------------------------------1.00---------------------
...................................................................................CGGTCCGCCCCTCTCCG......................................................................................................................................................1711.003.00---------------------------------------1.00-----------------------------------
....................................................................................GGTCCGCCCCTCTCC.......................................................................................................................................................1521.001.00--------------1.00------------------------------------------------------------
....................CCCACGGGACGGTGCTGA....................................................................................................................................................................................................................1811.001.00----------------------1.00----------------------------------------------------
...................................................................................CGGTCCGCCCCTCTCCGCC....................................................................................................................................................1911.003.00------1.00--------------------------------------------------------------------
...................................................................................CGGTCCGCCCCTCTCCCGC....................................................................................................................................................1911.003.00------1.00--------------------------------------------------------------------
.......................................................................................................................................CCGCCCCACCCCCGTGCG.................................................................................................1811.001.00---------1.00-----------------------------------------------------------------
....................................................................................................................................TCGCCGCCCCACCCCGCG....................................................................................................181.000.00-----------------------------------1.00---------------------------------------
...................................................................................CGGTCCGCCCCTCTC........................................................................................................................................................1511.001.00-------------------------------1.00-------------------------------------------
..............TCTGGGCCCACGGGACGGTGCTGAGGAACC..............................................................................................................................................................................................................3011.001.00---1.00-----------------------------------------------------------------------
..........................................................................................................TCCTTCCTCGGGAGGGCT..............................................................................................................................1821.000.50----1.00----------------------------------------------------------------------
........................................................GACGCGCCTGGGCTGGA.................................................................................................................................................................................171.000.00------------------------------------------------1.00--------------------------
...........................................................................................................CCTTCCTCGGGAGGG................................................................................................................................1541.001.00---0.250.25--------------------------------------------------------------0.25-0.25-----
..AGGTCCTGAGCCTCTGGGCCCAC.................................................................................................................................................................................................................................2311.001.00--------------------------------1.00------------------------------------------
...........................................................................................................CCTTCCTCGGGAGGGCG..............................................................................................................................1740.751.00-------------------0.25-0.25------------------------------------------0.25----------
..........................................................................................................TCCTTCCTCGGGAGGG................................................................................................................................1620.500.50-------------------0.50-------------------------------------------------------
....................................................................................GGTCCGCCCCTCTCCGGCC...................................................................................................................................................1920.501.00-----------------------------------------------------------------0.50---------
...............................GTGCTGAGGAACCTCA...........................................................................................................................................................................................................1640.250.25----------------------------------------------------------------------0.25----
...........................................................................................................CCTTCCTCGGGAGGGCGCG............................................................................................................................1940.251.00--------------------------------------------------------------------0.25------
...........................................................................................................CCTTCCTCGGGAGGGCGC.............................................................................................................................1840.251.00----------------------------------------------------------------0.25----------
..........................................................................................................TCCTTCCTCGGGAGG.................................................................................................................................1550.200.20----------------------0.20----------------------------------------------------
...............................GTGCTGAGGAACCTC............................................................................................................................................................................................................1590.110.11-------------------------------------------------------------------------0.11-
...........................................................................................................................................................................................................................GGGGGCGCCGGCTCC................1590.110.11--------------------------------------------------------------------------0.11

Antisense strand
GCAGGTCCTGAGCCTCTGGGCCCACGGGACGGTGCTGAGGAACCTCACGGGTAATTGACGCGCCTGGGCTGGGGACGGGGATGCGGTCCGCCCCTCTCCTGTCTTCTCCTTCCTCGGGAGGGGACACGCTCCTCGCCGCCCCACCCCCGTGCGCGCCCCGCTCGGAGCTCCAGGTCCCGGCGAGGAAGGTGTTAATCGGAGCCACTCTGCGCGTGTCCCGGGGGCGCCGGCTCCCGCCACCCCCTTCCCT
..............................................................................(((.(((.....((((((((.................))))))))...)))))).((((((.........))).)))...............................................................................................
..............................................................................79............................................................................157...........................................................................................
SizePerfect hitTotal NormPerfect NormSRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		TAX577744(Rovira)
total RNA. (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR343336SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577741(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR191477(GSM715587)
2genomic small RNA (size selected RNA from to. (breast)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040011(GSM532896)
G529T. (cervix)		SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191444(GSM715554)
109genomic small RNA (size selected RNA from . (breast)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		SRR040007(GSM532892)
G601T. (cervix)		TAX577739(Rovira)
total RNA. (breast)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR191511(GSM715621)
161genomic small RNA (size selected RNA from . (breast)		SRR040012(GSM532897)
G648N. (cervix)		SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
........................................AACCTCACGGGTAATTAAC............................................................................................................................................................................................... 192.000.00-----------2.00---------------------------------------------------------------
.......................................................................................................................................................CCGGGACCTGGAGCTCCGAGCGGGGCGCG...................................................................... 2911.001.00----------------------------------------------------1.00----------------------
.......................................................................................................................................................................CTCCAGGTCCCGGCGTC.................................................................. 171.000.00---------------1.00-----------------------------------------------------------
..........................................................CGCGCCTGGGCTGGGGCC.............................................................................................................................................................................. 181.000.00----------1.00----------------------------------------------------------------
...................................................................................................................................................................................................................CGTGTCCCGGGGGCGTTCT.................... 191.000.00---------------1.00-----------------------------------------------------------
...............................................................................................................................................................................................................TGCGCGTGTCCCGGGATTG........................ 191.000.00-------------------------1.00-------------------------------------------------
......................................................................................................................................................................................................................................CTCCCGCCACCCCCTTCT.. 181.000.00--------------------------------------------1.00------------------------------
.............................................................................................................................ACGCTCCTCGCCGCCCAAT.......................................................................................................... 191.000.00------------------------------1.00--------------------------------------------
........................................................................................................................................................................................................................CCCGGGGGCGCCGGCGCC................ 181.000.00-------------1.00-------------------------------------------------------------
.................................................................................................................................TCCTCGCCGCCCCACCCCA...................................................................................................... 191.000.00-----------------------------------------------1.00---------------------------
...............CTGGGCCCACGGGACGTGT........................................................................................................................................................................................................................ 191.000.00------------------------------------1.00--------------------------------------
.............................................................................................................................................................CCGCTCGGAGCTCCACGT........................................................................... 180.500.00--------------------------------------------------------------0.50------------
.........................CCTCAGCACCGTCCC.................................................................................................................................................................................................................. 1530.330.33------------------------------------------------------------------0.33--------
.............................................................................................................................................................TGGAGCTCCGAGCGG.............................................................................. 1540.250.25-----------------------------------------------------------------------0.25---
.................................................................................................................................................CGGGGCGCGCACGGG.......................................................................................... 1560.170.17------------------------------------------------------------------------0.17--