| (3) B-CELL | (10) BREAST | (30) CELL-LINE | (6) CERVIX | (2) HEART | (1) HELA | (8) LIVER | (1) OTHER | (1) RRP40.ip | (5) SKIN | (1) XRN.ip |
| AGCCTTCACTGGGAAGGCTCTGTGGAAAAGGTGGGTCTTGAGAGTTTGGATAAACGGGAGTGGAATCCCAGGTGGCAGGCCAGTGTAAGCAAAGGCTTGGAGGCCATGGGGTCGGATGAGGAGTTGGGAGGGCTGAACCCAGTTGGAACCAGGCCCTAAAAAGCCTTGACTTTTGGCATGGGGTCGGGGGCTCTGTCCAGGCTATACAGTCACATCCAGCTGGCCAGCAAGCTCTCCTCTGGCTGTGACT ............................................................................................((((((((.((((.(((..((.(((..((.(((.((....)).))))).))).)).))))))))))...))))).......(((.(((((((.....))))))))))................................................... ............................................................................................93.........................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR037936(GSM510474) 293cand1. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR040008(GSM532893) G727N. (cervix) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR040018(GSM532903) G701N. (cervix) | SRR029124(GSM416753) HeLa. (hela) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR189787 | SRR191630(GSM715740) 70genomic small RNA (size selected RNA from t. (breast) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR191594(GSM715704) 70genomic small RNA (size selected RNA from t. (breast) | TAX577742(Rovira) total RNA. (breast) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR039637(GSM518474) THP1_total_sRNAs. (cell line) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR040019(GSM532904) G701T. (cervix) | SRR330892(SRX091730) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR191599(GSM715709) 89genomic small RNA (size selected RNA from t. (breast) | SRR040028(GSM532913) G026N. (cervix) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR191566(GSM715676) 94genomic small RNA (size selected RNA from t. (breast) | SRR191612(GSM715722) 65genomic small RNA (size selected RNA from t. (breast) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | SRR040036(GSM532921) G243N. (cervix) | GSM416733(GSM416733) HEK293. (cell line) | SRR191449(GSM715559) 144genomic small RNA (size selected RNA from . (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR037931(GSM510469) 293GFP. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040039(GSM532924) G531T. (cervix) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR207116(GSM721078) Nuclear RNA. (cell line) | TAX577745(Rovira) total RNA. (breast) | SRR191615(GSM715725) 94genomic small RNA (size selected RNA from t. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................TGGAGGCCATGGGGTTGGT...................................................................................................................................... | 19 | 69.00 | 0.00 | 2.00 | 8.00 | 3.00 | - | 6.00 | - | - | - | 2.00 | 5.00 | 4.00 | - | - | 3.00 | 4.00 | 3.00 | - | 2.00 | - | 2.00 | - | - | 1.00 | 1.00 | 2.00 | 1.00 | 2.00 | 2.00 | - | 2.00 | 2.00 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | 1.00 | - | - | 1.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTGGA...................................................................................................................................... | 19 | 25.00 | 0.00 | 10.00 | - | - | 4.00 | 1.00 | - | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTGGG...................................................................................................................................... | 19 | 16.00 | 0.00 | 4.00 | - | - | - | 1.00 | - | - | 4.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTACA....................................................................................................................................... | 18 | 10.00 | 0.00 | - | 4.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............AGGCTCTGTGGAAAATGG.......................................................................................................................................................................................................................... | 18 | 8.00 | 0.00 | - | - | - | - | - | 6.00 | - | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTA........................................................................................................................................ | 17 | 5.00 | 0.00 | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............AGGCTCTGTGGAAAATGGA......................................................................................................................................................................................................................... | 19 | 4.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTGT....................................................................................................................................... | 18 | 4.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTAA....................................................................................................................................... | 18 | 4.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTGAA...................................................................................................................................... | 19 | 3.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTCGG....................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGAGGCCATGGGGTTACA...................................................................................................................................... | 19 | 2.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTGCA...................................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................GGGTCGGGGGCTCTGTCGCTC................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................ATGAGGAGTTGGGAGGTGAA................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............AGGCTCTGTGGAAAATGT.......................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................................GGGGGCTCTGTCCAGTGC............................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTAGGA...................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................AAAAGGTGGGTCTTGT................................................................................................................................................................................................................. | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTCA....................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................................AGTTGGAACCAGGCCTACG........................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTCG....................................................................................................................................... | 18 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTACCA...................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTCGGC...................................................................................................................................... | 19 | 1 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGAGGCCATGGGGTTACC...................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTTG....................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTAGAA...................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTCGGCT..................................................................................................................................... | 20 | 1 | 1.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGGAGGCCATGGGGTTAGT...................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................TTGGAGGCCATGGGGTTA........................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................TGGAGGCCATGGGGTTGTC...................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................TTGGAGGCCATGGGGTTG........................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGCCTTCACTGGGAAGGCTCTGTGGAAAAGGTGGGTCTTGAGAGTTTGGATAAACGGGAGTGGAATCCCAGGTGGCAGGCCAGTGTAAGCAAAGGCTTGGAGGCCATGGGGTCGGATGAGGAGTTGGGAGGGCTGAACCCAGTTGGAACCAGGCCCTAAAAAGCCTTGACTTTTGGCATGGGGTCGGGGGCTCTGTCCAGGCTATACAGTCACATCCAGCTGGCCAGCAAGCTCTCCTCTGGCTGTGACT ............................................................................................((((((((.((((.(((..((.(((..((.(((.((....)).))))).))).)).))))))))))...))))).......(((.(((((((.....))))))))))................................................... ............................................................................................93.........................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR037939(GSM510477) 293cand5_rep1. (cell line) | SRR037940(GSM510478) 293cand5_rep2. (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR039616(GSM531979) HBV(+) Distal Tissue Sample 1. (liver) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR037942(GSM510480) 293DroshaTN_cand5. (cell line) | SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line) | SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver) | SRR037936(GSM510474) 293cand1. (cell line) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR039618(GSM531981) HBV(+) Side Tissue Sample 1. (liver) | SRR040008(GSM532893) G727N. (cervix) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR039617(GSM531980) HBV(+) Adjacent Tissue Sample 1. (liver) | SRR040018(GSM532903) G701N. (cervix) | SRR029124(GSM416753) HeLa. (hela) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR189787 | SRR191630(GSM715740) 70genomic small RNA (size selected RNA from t. (breast) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR191594(GSM715704) 70genomic small RNA (size selected RNA from t. (breast) | TAX577742(Rovira) total RNA. (breast) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR037941(GSM510479) 293DroshaTN. (cell line) | SRR039619(GSM531982) HBV(+) HCC Tissue Sample 1. (liver) | SRR037944(GSM510482) 293DcrTN_cand5. (cell line) | SRR039637(GSM518474) THP1_total_sRNAs. (cell line) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR029054(GSM402329) MCF7_smallRNAseq. (cell line) | SRR444042(SRX128890) Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin) | SRR040019(GSM532904) G701T. (cervix) | SRR330892(SRX091730) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR207111(GSM721073) Whole cell RNA. (cell line) | SRR191599(GSM715709) 89genomic small RNA (size selected RNA from t. (breast) | SRR040028(GSM532913) G026N. (cervix) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR191566(GSM715676) 94genomic small RNA (size selected RNA from t. (breast) | SRR191612(GSM715722) 65genomic small RNA (size selected RNA from t. (breast) | SRR033710(GSM497055) GCB DLBCL (GCB385). (B cell) | SRR040036(GSM532921) G243N. (cervix) | GSM416733(GSM416733) HEK293. (cell line) | SRR191449(GSM715559) 144genomic small RNA (size selected RNA from . (breast) | SRR037937(GSM510475) 293cand2. (cell line) | SRR037931(GSM510469) 293GFP. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040039(GSM532924) G531T. (cervix) | SRR037932(GSM510470) 293cand4_rep1. (cell line) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR037938(GSM510476) 293Red. (cell line) | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR444060(SRX128908) Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin) | SRR107296(GSM677703) 18-30nt fraction of small RNA. (cell line) | SRR037934(GSM510472) 293cand4_rep3. (cell line) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR342895(SRX096791) small RNA seq of Left atrial tissue. (heart) | SRR207116(GSM721078) Nuclear RNA. (cell line) | TAX577745(Rovira) total RNA. (breast) | SRR191615(GSM715725) 94genomic small RNA (size selected RNA from t. (breast) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR038852(GSM458535) QF1160MB. (cell line) | SRR330903(SRX091741) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR342901(SRX096797) small RNA seq of Left atrial tissue. (heart) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................ATAAACGGGAGTGGAT......................................................................................................................................................................................... | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................AGGTGGCAGGCCAGTGTCTGG................................................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................GGAGGCCATGGGGTCTGT...................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................CCCCATGGCCTCCAAGC........................................................................................................................................... | 17 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - |
| .......................................................................................................................TCAGCCCTCCCAACTCC.................................................................................................................. | 17 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |