ID: uc010jdo.1_intron_19_0_chr5_131329945_r.5p
GENE: (1)
chr5:131347263-131347512-


(5)
AGO2.ip
(2)
B-CELL
(3)
BRAIN
(23)
BREAST
(21)
CELL-LINE
(23)
CERVIX
(4)
LIVER
(2)
OTHER
(1)
RRP40.ip
(47)
SKIN
(1)
XRN.ip

Sense strand
TCAGTGCGGGGCAAGCCCCAGACCCGGCCGGCCAGGCTGCAGGGCAGGGAGTAAGGCTCGGTTGCGAGTGCGCGCCGCGCCCTCCCCCTTGAGCCGTCTCCGCAGCGGCGCGGGGAGGCGGGAGCTGCGGGGCCGGAGGGCGGGGGCTAAAAATACCCGGCAGCGGCGGCGGCGGCGCGGCTACTGCTGGGGCTGCTGGGCTGCGGGGCTGCGGGGCTGCGGGTCGGGGAGGCCGGGCCGGGCCGGGCCG
........................................................................................................(((.(((.....(((....))).....((((....((.(((..........))).)).....)))).))).)))........................................................................
........................................................................................................105.......................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormGSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189784GSM956925PAZD5SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR189785SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR040011(GSM532896)
G529T. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040041(GSM532926)
G612T. (cervix)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532880(GSM532880)
G659T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR040033(GSM532918)
G603T. (cervix)
TAX577579(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532889(GSM532889)
G576N. (cervix)
GSM532877(GSM532877)
G691N. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191470(GSM715580)
118genomic small RNA (size selected RNA from . (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191634(GSM715744)
98genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
GSM532879(GSM532879)
G659N. (cervix)
TAX577453(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
.............................................................................................................................................................CGGCAGCGGCGGCGGCGG...........................................................................18063.0063.0016.0018.008.007.005.004.00--5.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CGGCAGCGGCGGCGGCGGCG.........................................................................20028.0028.006.006.008.004.00-4.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CGGCAGCGGCGGCGGCGGC..........................................................................19027.0027.007.008.005.003.001.002.00--1.00------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GCGGGTCGGGGAGGCGGC..............187.000.00------4.00---------------1.00------1.00-1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................................AAAATACCCGGCAGCTTTG..................................................................................197.000.00-------5.00-----2.00-------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CGGCAGCGGCGGCGGCG............................................................................1705.005.001.00--3.00-1.00---------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................GGCAGCGGCGGCGGCGGC..........................................................................1804.004.001.00---3.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................GGCAGCGGCGGCGGCGG...........................................................................1704.004.001.00---3.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GCGGGTCGGGGAGGCGGG..............184.000.00------1.00--------------------------------1.00-----------1.001.00----------------------------------------------------------------------------
................................................................................................................................................................CAGCGGCGGCGGCGGCG.........................................................................1704.004.002.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GCGGGTCGGGGAGGCGGCG.............193.000.00------1.00------------------------------------------1.001.00------------------------------------------------------------------------------
...............................................................................................................................................................................CGCGGCTACTGCTGGGGC.........................................................1812.002.00---------2.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................AAAATACCCGGCAGCTCTG..................................................................................192.000.00-------1.00-----1.00-------------------------------------------------------------------------------------------------------------------
.............................................................................................................GCGGGGAGGCGGGAGCTGCGTG.......................................................................................................................222.000.00-------------------2.00-------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................GGCAGCGGCGGCGGCGGCG.........................................................................1902.002.00----2.00----------------------------------------------------------------------------------------------------------------------------
................................CAGGCTGCAGGGCAGGGGCG......................................................................................................................................................................................................201.000.00----------------------------------1.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................ACTGCTGGGGCTGCTGGGCTGC..............................................2211.001.00---------------1.00-----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CGGCGGCGGCGGCGCGTCTT...................................................................2001.001.00-----------------------------------------------1.00---------------------------------------------------------------------------------
......................................................................CGCGCCGCGCCCTCCCCG..................................................................................................................................................................181.000.00------------------------------1.00--------------------------------------------------------------------------------------------------
...............................CCAGGCTGCAGGGCAGGGAGTA.....................................................................................................................................................................................................2211.001.00------------------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................CGGCGGCGGCGGCGCG.......................................................................1601.001.00----1.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CGGCAGCGGCGGCGGCGGCGCG.......................................................................2221.001.000.50-0.50------------------------------------------------------------------------------------------------------------------------------
....TGCGGGGCAAGCCCCAACAG..................................................................................................................................................................................................................................201.000.00------------1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................AGGCGGGAGCTGCGGTGCG....................................................................................................................191.000.00-------------------------1.00-------------------------------------------------------------------------------------------------------
..............................................GGGAGTAAGGCTCGGTTGC.........................................................................................................................................................................................1911.001.00----------------1.00----------------------------------------------------------------------------------------------------------------
.....................ACCCGGCCGGCCAGGCGGGG.................................................................................................................................................................................................................201.000.00-----------------1.00---------------------------------------------------------------------------------------------------------------
....TGCGGGGCAAGCCCCAACCG..................................................................................................................................................................................................................................201.000.00------------1.00--------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................GTCGGGGAGGCCGGGGTG..........181.000.00----------------------------------------------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................GCAGCGGCGGCGGCGGCG.........................................................................1801.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................GGAGGCGGGAGCTGCGGCAA.....................................................................................................................201.000.00------------------------------------------------1.00--------------------------------------------------------------------------------
...............................................................................................................................................................GCAGCGGCGGCGGCGGCC.........................................................................181.000.00--1.00------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CGGGGAGGCGGGAGCTGC..........................................................................................................................1821.001.000.500.50-------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................CGGGGCCGGAGGGCGGGGGCTT.....................................................................................................221.000.00-----------------------------------1.00---------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................TGCGGGTCGGGGAGGCGGA..............191.000.00------1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GCGGGTCGGGGAGGCGG...............171.000.00--------------------1.00------------------------------------------------------------------------------------------------------------
........................................................................CGCCGCGCCCTCCCCCGGA...............................................................................................................................................................191.000.00--------------------------1.00------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................GGGGCTGCGGGTCGGTCC....................181.000.00---------------------------1.00-----------------------------------------------------------------------------------------------------
..............................GCCAGGCTGCAGGGCAGGGAGTAAGGC.................................................................................................................................................................................................2711.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................GGCGGCGGCGCGGCTAGC.................................................................181.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CGGGGCTGCGGGGCT................................1501.001.00----------------------------------------1.00----------------------------------------------------------------------------------------
..........................................................................................................................................GGCGGGGGCTAAAAAAAAA.............................................................................................191.000.00--------------------------------1.00------------------------------------------------------------------------------------------------
.......................................................................................................................................GAGGGCGGGGGCTAATAGA................................................................................................191.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------
.............................................AGGGAGTAAGGCTCGGT............................................................................................................................................................................................1711.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................GGGTCGGGGAGGCCGGGA............181.000.00--------------------------------------1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................GGCAGCGGCGGCGGCGGCGAG.......................................................................2101.002.00----1.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CGGCAGCGGCGGCGGCGGCGAG.......................................................................2201.0028.001.00--------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................CAGCGGCGGCGGCGGCGTG.......................................................................1901.004.001.00--------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................GCGGGGCCGGAGGGCGGCGG........................................................................................................201.000.00--1.00------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GGCGGGGGCTAAAAAAAA..............................................................................................181.000.00----------1.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................CGGCAGCGGCGGCGGCGGCGCGG......................................................................2311.001.00-1.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................GCGGGAGCTGCGGGGCCGGTGAA..............................................................................................................231.000.00------------1.00--------------------------------------------------------------------------------------------------------------------
.....................................................................GCGCGCCGCGCCCTCCCC...................................................................................................................................................................1820.500.50--------------------------------------------------------------0.50------------------------------------------------------------------
.................................................................................................................................................................................CGGCTACTGCTGGGGC.........................................................1620.500.50---------0.50-----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................CGGGTCGGGGAGGCC................1540.250.25-----------------------------------------------------------------------------------0.25---------------------------------------------
...........................................................................................................................................................CCCGGCAGCGGCGGCGGCG............................................................................1970.140.14-------------------------------------------------------------------------------------------------------------0.14-------------------

Antisense strand
TCAGTGCGGGGCAAGCCCCAGACCCGGCCGGCCAGGCTGCAGGGCAGGGAGTAAGGCTCGGTTGCGAGTGCGCGCCGCGCCCTCCCCCTTGAGCCGTCTCCGCAGCGGCGCGGGGAGGCGGGAGCTGCGGGGCCGGAGGGCGGGGGCTAAAAATACCCGGCAGCGGCGGCGGCGGCGCGGCTACTGCTGGGGCTGCTGGGCTGCGGGGCTGCGGGGCTGCGGGTCGGGGAGGCCGGGCCGGGCCGGGCCG
........................................................................................................(((.(((.....(((....))).....((((....((.(((..........))).)).....)))).))).)))........................................................................
........................................................................................................105.......................................................................179.....................................................................
SizePerfect hitTotal NormPerfect NormGSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189784GSM956925PAZD5SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782SRR189785SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037938(GSM510476)
293Red. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577739(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577741(Rovira)
total RNA. (breast)
SRR040011(GSM532896)
G529T. (cervix)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040041(GSM532926)
G612T. (cervix)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
GSM532880(GSM532880)
G659T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR029126(GSM416755)
143B. (cell line)
SRR040033(GSM532918)
G603T. (cervix)
TAX577579(Rovira)
total RNA. (breast)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040035(GSM532920)
G001T. (cervix)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR040016(GSM532901)
G645N. (cervix)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR040018(GSM532903)
G701N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532889(GSM532889)
G576N. (cervix)
GSM532877(GSM532877)
G691N. (cervix)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191470(GSM715580)
118genomic small RNA (size selected RNA from . (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532874(GSM532874)
G699T. (cervix)
GSM532884(GSM532884)
G871T. (cervix)
SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
TAX577740(Rovira)
total RNA. (breast)
SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)
GSM532890(GSM532890)
G576T. (cervix)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191634(GSM715744)
98genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
GSM532879(GSM532879)
G659N. (cervix)
TAX577453(Rovira)
total RNA. (breast)
SRR040024(GSM532909)
G613N. (cervix)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
..............................................................................................................................GCGGGGCCGGAGGGCGGG.......................................................................................................... 186.000.00----------0.20---0.20-----0.600.200.20---0.20-0.20-------------------------0.400.200.40---0.20-----0.200.200.200.20-0.200.200.200.20----0.200.20---------0.20---0.20--0.20---------0.200.20--------------------
..............................................................................................................................GCGGGGCCGGAGGGCGTCC......................................................................................................... 194.000.00----------2.00----------------------1.00-------------------1.00---------------------------------------------------------------------------
..............................................................................................................................GCGGGGCCGGAGGGCGGTC......................................................................................................... 193.620.00----------0.12---------0.120.25--0.120.120.12-0.12-------------------------0.120.12--0.120.12---0.380.250.25-------0.120.120.12-0.12-0.120.12-0.12---0.120.12-------------------------0.12---------------
..............................................................................................................................GCGGGGCCGGAGGGCGGGTC........................................................................................................ 203.200.00--------------0.20-------0.40------------------------------------0.20-----0.20--0.20-0.40------0.20----------0.20---0.200.20-0.200.20---0.200.20---------------------------
..............................................................................................................................CCGCCCTCCGGCCCCGC........................................................................................................... 1752.402.40------0.20------------------0.20--0.20--------------------------0.200.20-0.20-0.200.20----0.20----0.20---0.20--------------------------0.20--------------------------
..............................................................................................................................GCGGGGCCGGAGGGCGG........................................................................................................... 172.380.00--------------0.12-----0.12--0.120.12--0.120.25----------------------------0.120.12-------------------0.12-----0.12-0.12-------------------------0.12-0.120.12--0.120.12--0.120.12-----
..............................................................................................................................GCGGGGCCGGAGGGCGT........................................................................................................... 172.000.00--------------1.001.00-----------------------------------------------------------------------------------------------------------------
..........GCAAGCCCCAGACCCGGCCTT........................................................................................................................................................................................................................... 212.000.00------------------2.00--------------------------------------------------------------------------------------------------------------
..............................................................................................................................GCGGGGCCGGAGGGCGTC.......................................................................................................... 182.000.00--------------1.00------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................GCGGGGCCGGAGGGCGGGTCC....................................................................................................... 212.000.00---------------------0.20-----0.20---------------------------0.20-----0.20-----0.20-0.20--------0.20--------------------0.20-----0.200.20----------------------
..............................................................................................................................GCGGGGCCGGAGGGCGGTCC........................................................................................................ 201.880.00----------------------------0.12-------------------------0.25----0.25----0.12-------0.12---0.12-------0.120.25------------------------------0.12----0.12---0.120.12--
..............................................................................................................................GCGGGGCCGGAGGGCGGGT......................................................................................................... 191.800.00---------------------0.20------0.20----------------------------0.20------------------0.20------------0.20-0.20------0.20----0.200.20------------------------
..............................................................................................................................CGCCCTCCGGCCCCGC............................................................................................................ 1681.251.25----------------------------------------------------------0.12-0.120.12-0.12-----------------0.25-----0.12----------------------0.120.12--------0.12--------
.............................................TCGCAACCGAGCCTTACTCCCT....................................................................................................................................................................................... 2211.001.00---------------------------------------------1.00-----------------------------------------------------------------------------------
........................................................................CGCCGCGCCCTCCCCCTGCCG............................................................................................................................................................. 211.000.00--------------------------------------------1.00------------------------------------------------------------------------------------
....................................................................................................CGCAGCGGCGCGGGGAC..................................................................................................................................... 171.000.00------------------------------------1.00--------------------------------------------------------------------------------------------
..........................................................................CCGCGCCCTCCCCCTAGG.............................................................................................................................................................. 181.000.00-----------1.00---------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................CAGCCCCGCAGCCCCG............................... 1601.001.00-------------------------------------1.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................CGGCGGCGGCGCGGCACGC................................................................. 191.000.00-----------------------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................GCGGGGCCGGAGGGCGGT.......................................................................................................... 181.000.00----------------------------0.120.12---------------------------0.25------0.12----------------------------------------------------0.12------0.12--0.12-
..............................................................................................................................GCGGGGCCGGAGGGCGTT.......................................................................................................... 181.000.00-----------------------------------------1.00---------------------------------------------------------------------------------------
...............................................................................CCCTCCCCCTTGAGCTCGC........................................................................................................................................................ 191.000.00----------------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................GCGCGCCGCGCCCTCCGCC.................................................................................................................................................................. 191.000.00-------------------------------------------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................................CCCGGCAGCGGCGGCGGCGTG.......................................................................... 211.000.00-----------------1.00---------------------------------------------------------------------------------------------------------------
............................................................................................CCCCGCGCCGCTGCGGAGACGGC....................................................................................................................................... 2311.001.00---------1.00-----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................GCCGGAGGGCGGGGGGGAA.................................................................................................... 191.000.00------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CGGGGCTGCGGGTCGGATC.................... 191.000.00------------------------------------------1.00--------------------------------------------------------------------------------------
...............................................................................................................................CCGCCCTCCGGCCCCG........................................................................................................... 1680.380.38--------------------------------------------------------0.12-------------------------0.12---------------------------------------------0.12
...........................................................................AAGGGGGAGGGCGCG................................................................................................................................................................ 1530.330.33-----------------------0.33---------------------------------------------------------------------------------------------------------
.................GCCGGCCGGGTCTGG.......................................................................................................................................................................................................................... 1530.330.33---------0.33-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................GCGGGGCCGGAGGGCGGGCC........................................................................................................ 200.120.00------------------------0.12--------------------------------------------------------------------------------------------------------
...............................................................................................................................CGGGGCCGGAGGGCGGTG......................................................................................................... 180.120.00----------------------0.12----------------------------------------------------------------------------------------------------------
..............................................................................................................................GCGGGGCCGGAGGGCGGTCT........................................................................................................ 200.120.00------------------------------------------------------0.12--------------------------------------------------------------------------