ID: uc010jce.1_intron_13_0_chr5_112889384_f
GENE: (14)
chr5:112889334-112889513+


(1)
B-CELL
(3)
BREAST
(3)
CELL-LINE
(3)
HELA
(1)
LIVER
(1)
OTHER
(5)
SKIN

Sense strand
AGAGATCGCATCCTGTTTGATGACAAGCGGTTTGCTGACAGTACACATAGGTAAGGGCTAAAGCCTTATATCTGTTGCTTAAAATAACGGACAGGTCTTATAGTATGTTTTCTCTTTCAATTGTCTGCAGATACCAAGTCTTTATGCTTCATTCAAATATGCAAACATCCGATCAAAAGA
.......................................................................................(((((((.......((........)).......))))))).....................................................
................................................................................81...............................................130................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189785SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
..................................................GTAAGGGCTAAAGCCTTATATCTGTTGCTTAAAATAACGGACAGGTCTTATAGTATGTTTTCTCTTTCAATTGTCTGCAG..................................................80139.0039.0026.009.004.00--------------
..................................................GTAAGGGCTAAAGCCTTATATCTGTTGCTTAAAATAACGGACAGGTCTTATAGTATGTTTTCTCTTTCAATTGTCTGC....................................................78114.0014.0014.00----------------
..................................................GTAAGGGCTAAAGCCTTATATCTGTTGCTTAAAATAACGGACAGGTCTTATAGTATGTTTTCTCTTTCAATTGTCTGCAGA.................................................8118.008.00-8.00---------------
.....................................................................................AACGGACAGGTCTTATAGT............................................................................1912.002.00----2.00------------
..........................GCGGTTTGCTGACAGT..........................................................................................................................................1621.501.50-----1.50-----------
.................................................................................................................................................GCTTCATTCAAATATCTGC................191.000.00--------1.00--------
.........................AGCGGTTTGCTGACAGTACACA.....................................................................................................................................2211.001.00---1.00-------------
........................................................................................GGACAGGTCTTATAGTATGT........................................................................2011.001.00------------1.00----
..............................................................................................................TCTCTTTCAATTGTCTGCAG..................................................2011.001.00------1.00----------
..................GATGACAAGCGGTTTGCTGACA............................................................................................................................................2211.001.00---1.00-------------
.........................AGCGGTTTGCTGACAGTACACATA...................................................................................................................................2411.001.00---1.00-------------
...........................................................................................................................................................AATATGCAAACATCCGATC......1911.001.00---------------1.00-
..............................................................................................................................................TATGCTTCATTCAAATATCT..................201.000.00-------1.00---------
...............................................................................................................................................ATGCTTCATTCAAATAT....................1730.330.33----------------0.33

Antisense strand
AGAGATCGCATCCTGTTTGATGACAAGCGGTTTGCTGACAGTACACATAGGTAAGGGCTAAAGCCTTATATCTGTTGCTTAAAATAACGGACAGGTCTTATAGTATGTTTTCTCTTTCAATTGTCTGCAGATACCAAGTCTTTATGCTTCATTCAAATATGCAAACATCCGATCAAAAGA
.......................................................................................(((((((.......((........)).......))))))).....................................................
................................................................................81...............................................130................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189785SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
..............................................................CCGTTATTTTAAGCAACAGATATAAGGC.......................................................................................... 2811.001.00--------------1.00--
..............................................................AAGCAACAGATATAAGGC.................................................................................................... 1811.001.00---------1.00-------
..............................................................TAAGCAACAGATATAAGGC................................................................................................... 1911.001.00-----------1.00-----
...................................................TAAGGGCTAAAGCCTAT................................................................................................................ 171.000.00----------1.00------