| (1) BRAIN | (1) BREAST | (5) CELL-LINE | (2) CERVIX | (1) HEART | (1) LIVER | (1) OTHER | (2) SKIN |
| TATTGTCATCCATTTTATATACTCAGAGTTTTGGAGTTGGTCTTTTCTGTTTTTTGTTTGTTTGTTTTTGTTTCGCTTGGTACTCATCCATAGTATTCAAAAAATAGTGAGTCTTTGAGATGTTATTTTGCTTTGGCTTCCATGACATAACACTTCCATGGTTTCTCCCTCTTCTGGACACTCCTTATCCATATTTTCAGGCTGATTTCCTTTCACCAAGATACTGAATTTTGGACTTCTTCAAGGCTCA ........................................................((..((..((((((....((((((.......))).)))...))))))..))..))........................................................................................................................................... ..................................................51...............................................................116.................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040043(GSM532928) G428T. (cervix) | SRR040042(GSM532927) G428N. (cervix) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | TAX577740(Rovira) total RNA. (breast) | SRR390723(GSM850202) total small RNA. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................ATTCAAAAAATAGTGCCA.......................................................................................................................................... | 18 | 26.00 | 0.00 | - | - | 18.00 | 8.00 | - | - | - | - | - | - | - | - | - | - | |
| ...........................................TTTCTGTTTTTTGTTTGGGG........................................................................................................................................................................................... | 20 | 5.00 | 0.00 | 2.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTCTGC.............................................................................................................................................................................. | 27 | 5.00 | 0.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTCTTG.............................................................................................................................................................................. | 29 | 4.00 | 0.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGCTGG................................................................................................................................................................................ | 27 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................TGTTTGTTTGTTTTTGTTTCCG.............................................................................................................................................................................. | 22 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................TTGGTCTTTTCTGTTTTTTGTTTTGG............................................................................................................................................................................................ | 26 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTTCGC.............................................................................................................................................................................. | 29 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTTCTGTT............................................................................................................................................................................ | 31 | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................CTTTTCTGTTTTTTGTTTGTTTGTTCTTG.................................................................................................................................................................................... | 29 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................TCTGTTTTTTGTTTGTTTGTTTTTAGAC................................................................................................................................................................................. | 28 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................TTTGTTTGTTTGTTTTTGTTTCGGGTG........................................................................................................................................................................... | 27 | 2.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTCTCC.............................................................................................................................................................................. | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................GTTTTTTGTTTGTTTGTTTTTGTTTCGC.............................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................CTTTTCTGTTTTTTGTTAC.............................................................................................................................................................................................. | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................TTTCTGTTTTTTGTTTGTTTGTTTCTG.................................................................................................................................................................................... | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................TTTTTGTTTGTTTGTTTTTGTTTCGGG............................................................................................................................................................................. | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................TTTTCTGTTTTTTGTTTGTTTGTTTTTGC................................................................................................................................................................................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................ATTCAAAAAATAGTGAAACA........................................................................................................................................ | 20 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..............................................CTGTTTTTTGTTTGTTTGTTTTTTGCA................................................................................................................................................................................. | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................AGTTGGTCTTTTCTGTTTT..................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTCTAC.............................................................................................................................................................................. | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................TCAGGCTGATTTCCTTCCAT.................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTTCTTTC............................................................................................................................................................................ | 31 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTACC..................................................................................................................................................................................... | 22 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................TTCTGTTTTTTGTTTGTTTGTTTTTTTTG................................................................................................................................................................................. | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................GAGATGTTATTTTGCGTTT................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ....................................................TTTGTTTGTTTGTTTTTGTTTCGCTTCCC......................................................................................................................................................................... | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................GTTTTTTGTTTGTTTGTTTTTGTTTCTG.............................................................................................................................................................................. | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................TTCTGTTTTTTGTTTGTTTGTTTTTTTCG................................................................................................................................................................................. | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................TCTGTTTTTTGTTTGTTTGTTTTAAC................................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTC................................................................................................................................................................................. | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGGGGG................................................................................................................................................................................ | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTCTAT..................................................................................................................................................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTTCT............................................................................................................................................................................... | 28 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................TCTGTTTTTTGTTTGTTTGTTTTTCAC.................................................................................................................................................................................. | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................TTTTGTTTGTTTGTTTTTGTCGGG............................................................................................................................................................................... | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTTCGCTCGG.......................................................................................................................................................................... | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGGG.................................................................................................................................................................................. | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................TTTTTGTTTGTTTGTTTTTGTTTATGT............................................................................................................................................................................. | 27 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................TTGTTTTTGTTTCGCCTGG.......................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................TTTCTGTTTTTTGTTTGTTTGTTTTTGTCT................................................................................................................................................................................. | 30 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................TCTGTTTTTTGTTTGTTCGAG........................................................................................................................................................................................ | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................TCTGTTTTTTGTTTGTTTGTTTTGTA................................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................TTTGCTTTGGCTTCC............................................................................................................. | 15 | 0 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................TTTGTTTGTTTGTTTTTGTTTCGTCCT........................................................................................................................................................................... | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTTCCG.............................................................................................................................................................................. | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................GTTTTTTGTTTGTTTGTTTTTGTTCGG............................................................................................................................................................................... | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................GTTTTTTGTTTGTTTGTTTTTGTTTCTGTT............................................................................................................................................................................ | 30 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................TTTTCTGTTTTTTGTTTGGGG........................................................................................................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTTCTGTA............................................................................................................................................................................ | 31 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................ATTCAAAAAATAGTGCCAC......................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................TTTTTTGTTTGTTTGTTTTTGTGGCC............................................................................................................................................................................... | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................TTGTTTGTTTGTTTTTGTTTCGTGG............................................................................................................................................................................ | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................TGTTTGTTTGTTTTTGTTTCACTA............................................................................................................................................................................ | 24 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTCCGC.............................................................................................................................................................................. | 27 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................CTGTTTTTTGTTTGTTTGTTTTTCG................................................................................................................................................................................... | 25 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................TTTGTTTGTTTGTTTTTGTTTCCGC............................................................................................................................................................................. | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTGGCT.............................................................................................................................................................................. | 29 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................ATTCAAAAAATAGTGGTA.......................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | |
| ..................................................TTTTTGTTTGTTTGTTTTTGTTTCCG.............................................................................................................................................................................. | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................TTGTTTGTTTGTTTTTGTTTCACC............................................................................................................................................................................. | 24 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................TCTGTTTTTTGTTTGGGGT.......................................................................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................TTTTGGAGTTGGTCTTTTGGT......................................................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| .............................................TCTGTTTTTTGTTTGTTTAGGC....................................................................................................................................................................................... | 22 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................TGTTTTTTGTTTGTTTGTTTTTGTTTCTG.............................................................................................................................................................................. | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................TACTGAATTTTGGACTCTG.......... | 19 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| .....................................TGGTCTTTTCTGTTTTTTGTAGA.............................................................................................................................................................................................. | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTTCCTTG............................................................................................................................................................................ | 29 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .............................................TCTGTTTTTTGTTTGTTTGTTCGTC.................................................................................................................................................................................... | 25 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................GTTTGTTTTTGTTTCGCCTGG.......................................................................................................................................................................... | 21 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................TTTGTTTGTTTGTTTTTGTTTCCTGC............................................................................................................................................................................ | 26 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................GTTTTTTGTTTGTTTGTTTTTGTTCTGC.............................................................................................................................................................................. | 28 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................TACTGAATTTTGGACTTC........... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTTCGTTG............................................................................................................................................................................ | 29 | 4 | 0.50 | 0.50 | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TTTTGTTTGTTTGTTTTTGTTTCGGG............................................................................................................................................................................. | 26 | 4 | 0.50 | 0.25 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTTCG............................................................................................................................................................................... | 26 | 4 | 0.50 | 0.50 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................TTTTTTGTTTGTTTGTTTTTGTTTCGGA............................................................................................................................................................................. | 28 | 4 | 0.25 | 0.50 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TTTTGTTTGTTTGTTTTTGTTTCG............................................................................................................................................................................... | 24 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TTTTGTTTGTTTGTTTTTGTTTCGGGTG........................................................................................................................................................................... | 28 | 4 | 0.25 | 0.25 | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - |
| TATTGTCATCCATTTTATATACTCAGAGTTTTGGAGTTGGTCTTTTCTGTTTTTTGTTTGTTTGTTTTTGTTTCGCTTGGTACTCATCCATAGTATTCAAAAAATAGTGAGTCTTTGAGATGTTATTTTGCTTTGGCTTCCATGACATAACACTTCCATGGTTTCTCCCTCTTCTGGACACTCCTTATCCATATTTTCAGGCTGATTTCCTTTCACCAAGATACTGAATTTTGGACTTCTTCAAGGCTCA ........................................................((..((..((((((....((((((.......))).)))...))))))..))..))........................................................................................................................................... ..................................................51...............................................................116.................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR040043(GSM532928) G428T. (cervix) | SRR040042(GSM532927) G428N. (cervix) | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart) | GSM450601(GSM450601) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189782 | TAX577740(Rovira) total RNA. (breast) | SRR390723(GSM850202) total small RNA. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330859(SRX091697) tissue: skin psoriatic involveddisease state:. (skin) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................AGTTGGTCTTTTCTGTACA..................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| .............................................................................................................................................................ATGGTTTCTCCCTCTTCTAGTT....................................................................... | 22 | 0.50 | 0.00 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | |
| .............................................................................................................................................................AGAAGAGGGAGAAACCAT........................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TTGGTGAAAGGAAATC............................... | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |